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[bug#48575] [PATCH 09/50] gnu: r-impute: Move to (gnu packages bioconduc
From: |
zimoun |
Subject: |
[bug#48575] [PATCH 09/50] gnu: r-impute: Move to (gnu packages bioconductor). |
Date: |
Fri, 21 May 2021 22:25:41 +0200 |
* gnu/packages/bioinformatics.scm (r-impute): Move from here...
* gnu/packages/bioconductor.scm (r-impute): ...to here.
---
gnu/packages/bioconductor.scm | 20 ++++++++++++++++++++
gnu/packages/bioinformatics.scm | 20 --------------------
2 files changed, 20 insertions(+), 20 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index f9aa34d254..0b40d70397 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -2294,6 +2294,26 @@ Enrichment Analysis} (GSEA).")
the Human Protein Atlas project.")
(license license:artistic2.0)))
+(define-public r-impute
+ (package
+ (name "r-impute")
+ (version "1.64.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "impute" version))
+ (sha256
+ (base32
+ "1pnjasw9i19nmxwjzrd9jbln31yc5jilfvwk414ya5zbqfsazvxa"))))
+ (native-inputs
+ `(("gfortran" ,gfortran)))
+ (build-system r-build-system)
+ (home-page "https://bioconductor.org/packages/impute")
+ (synopsis "Imputation for microarray data")
+ (description
+ "This package provides a function to impute missing gene expression
+microarray data, using nearest neighbor averaging.")
+ (license license:gpl2+)))
+
(define-public r-limma
(package
(name "r-limma")
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 28893c40e7..ef5c1a3323 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -7873,26 +7873,6 @@ including VCF header and contents in RDF and JSON.")
information about the latest version of the Gene Ontologies.")
(license license:artistic2.0)))
-(define-public r-impute
- (package
- (name "r-impute")
- (version "1.64.0")
- (source (origin
- (method url-fetch)
- (uri (bioconductor-uri "impute" version))
- (sha256
- (base32
- "1pnjasw9i19nmxwjzrd9jbln31yc5jilfvwk414ya5zbqfsazvxa"))))
- (native-inputs
- `(("gfortran" ,gfortran)))
- (build-system r-build-system)
- (home-page "https://bioconductor.org/packages/impute")
- (synopsis "Imputation for microarray data")
- (description
- "This package provides a function to impute missing gene expression
-microarray data, using nearest neighbor averaging.")
- (license license:gpl2+)))
-
(define-public r-seqpattern
(package
(name "r-seqpattern")
--
2.30.1
- [bug#48575] [PATCH 00/50] Move some Bioconductor packages to (gnu packages bioconductor)., zimoun, 2021/05/21
- [bug#48575] [PATCH 01/50] gnu: r-genomicalignments: Move to (gnu packages bioconductor)., zimoun, 2021/05/21
- [bug#48575] [PATCH 03/50] gnu: r-genomicfeatures: Move to (gnu packages bioconductor)., zimoun, 2021/05/21
- [bug#48575] [PATCH 02/50] gnu: r-rtracklayer: Move to (gnu packages bioconductor)., zimoun, 2021/05/21
- [bug#48575] [PATCH 06/50] gnu: r-msnid: Move to (gnu packages bioconductor)., zimoun, 2021/05/21
- [bug#48575] [PATCH 05/50] gnu: r-bsgenome: Move to (gnu packages bioconductor)., zimoun, 2021/05/21
- [bug#48575] [PATCH 07/50] gnu: r-msnbase: Move to (gnu packages bioconductor)., zimoun, 2021/05/21
- [bug#48575] [PATCH 08/50] gnu: r-samr: Move to (gnu packages bioconductor)., zimoun, 2021/05/21
- [bug#48575] [PATCH 09/50] gnu: r-impute: Move to (gnu packages bioconductor).,
zimoun <=
- [bug#48575] [PATCH 11/50] gnu: r-go-db: Move to (gnu packages bioconductor)., zimoun, 2021/05/21
- [bug#48575] [PATCH 10/50] gnu: r-seqpattern: Move to (gnu packages bioconductor)., zimoun, 2021/05/21
- [bug#48575] [PATCH 13/50] gnu: r-genomationdata: Move to (gnu packages bioconductor)., zimoun, 2021/05/21
- [bug#48575] [PATCH 12/50] gnu: r-genomation: Move to (gnu packages bioconductor)., zimoun, 2021/05/21
- [bug#48575] [PATCH 04/50] gnu: r-topgo: Move to (gnu packages bioconductor)., zimoun, 2021/05/21
- [bug#48575] [PATCH 14/50] gnu: r-pcamethods: Move to (gnu packages bioconductor)., zimoun, 2021/05/21
- [bug#48575] [PATCH 15/50] gnu: r-mzid: Move to (gnu packages bioconductor)., zimoun, 2021/05/21
- [bug#48575] [PATCH 16/50] gnu: r-aroma-light: Move to (gnu packages bioconductor)., zimoun, 2021/05/21
- [bug#48575] [PATCH 18/50] gnu: r-edaseq: Move to (gnu packages bioconductor)., zimoun, 2021/05/21
- [bug#48575] [PATCH 20/50] gnu: r-annotationhub: Move to (gnu packages bioconductor)., zimoun, 2021/05/21