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[bug#48575] [PATCH 25/50] gnu: r-complexheatmap: Move to (gnu packages b
From: |
zimoun |
Subject: |
[bug#48575] [PATCH 25/50] gnu: r-complexheatmap: Move to (gnu packages bioconductor). |
Date: |
Fri, 21 May 2021 22:25:57 +0200 |
* gnu/packages/bioinformatics.scm (r-complexheatmap): Move from here...
* gnu/packages/bioconductor.scm (r-complexheatmap): ...to here.
---
gnu/packages/bioconductor.scm | 39 +++++++++++++++++++++++++++++++++
gnu/packages/bioinformatics.scm | 39 ---------------------------------
2 files changed, 39 insertions(+), 39 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index f6d3ef897a..92eb5a0906 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -2082,6 +2082,45 @@ genome data packages and support for efficient SNP
representation.")
analysis.")
(license license:artistic2.0)))
+(define-public r-complexheatmap
+ (package
+ (name "r-complexheatmap")
+ (version "2.6.2")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "ComplexHeatmap" version))
+ (sha256
+ (base32
+ "1nx1xxpq8zrvi990v9fmvx3msl85pdz5dp1gp6m78q6i4s2alg5x"))))
+ (properties
+ `((upstream-name . "ComplexHeatmap")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-cairo" ,r-cairo)
+ ("r-circlize" ,r-circlize)
+ ("r-clue" ,r-clue)
+ ("r-colorspace" ,r-colorspace)
+ ("r-digest" ,r-digest)
+ ("r-getoptlong" ,r-getoptlong)
+ ("r-globaloptions" ,r-globaloptions)
+ ("r-iranges" ,r-iranges)
+ ("r-matrixstats" ,r-matrixstats)
+ ("r-png" ,r-png)
+ ("r-rcolorbrewer" ,r-rcolorbrewer)
+ ("r-s4vectors" ,r-s4vectors)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
+ (home-page
+ "https://github.com/jokergoo/ComplexHeatmap")
+ (synopsis "Making Complex Heatmaps")
+ (description
+ "Complex heatmaps are efficient to visualize associations between
+different sources of data sets and reveal potential structures. This package
+provides a highly flexible way to arrange multiple heatmaps and supports
+self-defined annotation graphics.")
+ (license license:gpl2+)))
+
(define-public r-deseq
(package
(name "r-deseq")
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index daf1fb6958..acaf41acc4 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -9028,45 +9028,6 @@ distributed by file or by range. User defined mapper
and reducer functions
provide added flexibility for data combination and manipulation.")
(license license:artistic2.0)))
-(define-public r-complexheatmap
- (package
- (name "r-complexheatmap")
- (version "2.6.2")
- (source
- (origin
- (method url-fetch)
- (uri (bioconductor-uri "ComplexHeatmap" version))
- (sha256
- (base32
- "1nx1xxpq8zrvi990v9fmvx3msl85pdz5dp1gp6m78q6i4s2alg5x"))))
- (properties
- `((upstream-name . "ComplexHeatmap")))
- (build-system r-build-system)
- (propagated-inputs
- `(("r-cairo" ,r-cairo)
- ("r-circlize" ,r-circlize)
- ("r-clue" ,r-clue)
- ("r-colorspace" ,r-colorspace)
- ("r-digest" ,r-digest)
- ("r-getoptlong" ,r-getoptlong)
- ("r-globaloptions" ,r-globaloptions)
- ("r-iranges" ,r-iranges)
- ("r-matrixstats" ,r-matrixstats)
- ("r-png" ,r-png)
- ("r-rcolorbrewer" ,r-rcolorbrewer)
- ("r-s4vectors" ,r-s4vectors)))
- (native-inputs
- `(("r-knitr" ,r-knitr)))
- (home-page
- "https://github.com/jokergoo/ComplexHeatmap")
- (synopsis "Making Complex Heatmaps")
- (description
- "Complex heatmaps are efficient to visualize associations between
-different sources of data sets and reveal potential structures. This package
-provides a highly flexible way to arrange multiple heatmaps and supports
-self-defined annotation graphics.")
- (license license:gpl2+)))
-
(define-public r-dirichletmultinomial
(package
(name "r-dirichletmultinomial")
--
2.30.1
- [bug#48575] [PATCH 16/50] gnu: r-aroma-light: Move to (gnu packages bioconductor)., (continued)
- [bug#48575] [PATCH 16/50] gnu: r-aroma-light: Move to (gnu packages bioconductor)., zimoun, 2021/05/21
- [bug#48575] [PATCH 18/50] gnu: r-edaseq: Move to (gnu packages bioconductor)., zimoun, 2021/05/21
- [bug#48575] [PATCH 20/50] gnu: r-annotationhub: Move to (gnu packages bioconductor)., zimoun, 2021/05/21
- [bug#48575] [PATCH 17/50] gnu: r-deseq: Move to (gnu packages bioconductor)., zimoun, 2021/05/21
- [bug#48575] [PATCH 23/50] gnu: r-keggrest: Move to (gnu packages bioconductor)., zimoun, 2021/05/21
- [bug#48575] [PATCH 24/50] gnu: r-gage: Move to (gnu packages bioconductor)., zimoun, 2021/05/21
- [bug#48575] [PATCH 19/50] gnu: r-interactivedisplaybase: Move to (gnu packages bioconductor)., zimoun, 2021/05/21
- [bug#48575] [PATCH 22/50] gnu: r-affy: Move to (gnu packages bioconductor)., zimoun, 2021/05/21
- [bug#48575] [PATCH 21/50] gnu: r-fastseg: Move to (gnu packages bioconductor)., zimoun, 2021/05/21
- [bug#48575] [PATCH 27/50] gnu: r-dirichletmultinomial: Move to (gnu packages bioconductor)., zimoun, 2021/05/21
- [bug#48575] [PATCH 25/50] gnu: r-complexheatmap: Move to (gnu packages bioconductor).,
zimoun <=
- [bug#48575] [PATCH 30/50] gnu: r-vsn: Move to (gnu packages bioconductor)., zimoun, 2021/05/21
- [bug#48575] [PATCH 26/50] gnu: r-genomicfiles: Move to (gnu packages bioconductor)., zimoun, 2021/05/21
- [bug#48575] [PATCH 28/50] gnu: r-organismdbi: Move to (gnu packages bioconductor)., zimoun, 2021/05/21
- [bug#48575] [PATCH 31/50] gnu: r-biovizbase: Move to (gnu packages bioconductor)., zimoun, 2021/05/21
- [bug#48575] [PATCH 32/50] gnu: r-ensembldb: Move to (gnu packages bioconductor)., zimoun, 2021/05/21
- [bug#48575] [PATCH 35/50] gnu: r-sva: Move to (gnu packages bioconductor)., zimoun, 2021/05/21
- [bug#48575] [PATCH 33/50] gnu: r-mzr: Move to (gnu packages bioconductor)., zimoun, 2021/05/21
- [bug#48575] [PATCH 36/50] gnu: r-motifrg: Move to (gnu packages bioconductor)., zimoun, 2021/05/21
- [bug#48575] [PATCH 43/50] gnu: r-tximport: Move to (gnu packages bioconductor)., zimoun, 2021/05/21
- [bug#48575] [PATCH 34/50] gnu: r-protgenerics: Move to (gnu packages bioconductor)., zimoun, 2021/05/21