07/14: gnu: r-bsgenome-celegans-ucsc-ce6: Move to (gnu packages bioconductor).

[guix-commits]

rekado pushed a commit to branch master
in repository guix.

commit b7d93cf5087642103ae4a1f19ae38876d46c2b6c
Author: Ricardo Wurmus <address@hidden>
Date:   Wed Mar 6 21:29:20 2019 +0100

    gnu: r-bsgenome-celegans-ucsc-ce6: Move to (gnu packages bioconductor).
    
    * gnu/packages/bioinformatics.scm (r-bsgenome-celegans-ucsc-ce6):
    Move from here...
    * gnu/packages/bioconductor.scm (r-bsgenome-celegans-ucsc-ce6): ...to here.
---
 gnu/packages/bioconductor.scm   | 32 ++++++++++++++++++++++++++++++++
 gnu/packages/bioinformatics.scm | 32 --------------------------------
 2 files changed, 32 insertions(+), 32 deletions(-)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 936f521..24504d0 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -33,6 +33,38 @@
   #:use-module (gnu packages statistics)
   #:use-module (gnu packages web))
 
+(define-public r-bsgenome-celegans-ucsc-ce6
+  (package
+    (name "r-bsgenome-celegans-ucsc-ce6")
+    (version "1.4.0")
+    (source (origin
+              (method url-fetch)
+              ;; We cannot use bioconductor-uri here because this tarball is
+              ;; located under "data/annotation/" instead of "bioc/".
+              (uri (string-append "https://www.bioconductor.org/packages/";
+                                  "release/data/annotation/src/contrib/"
+                                  "BSgenome.Celegans.UCSC.ce6_"
+                                  version ".tar.gz"))
+              (sha256
+               (base32
+                "0mqzb353xv2c3m3vkb315dkmnxkgczp7ndnknyhpgjlybyf715v9"))))
+    (properties
+     `((upstream-name . "BSgenome.Celegans.UCSC.ce6")))
+    (build-system r-build-system)
+    ;; As this package provides little more than a very large data file it
+    ;; doesn't make sense to build substitutes.
+    (arguments `(#:substitutable? #f))
+    (propagated-inputs
+     `(("r-bsgenome" ,r-bsgenome)))
+    (home-page
+     "https://www.bioconductor.org/packages/BSgenome.Celegans.UCSC.ce6/";)
+    (synopsis "Full genome sequences for Worm")
+    (description
+     "This package provides full genome sequences for Caenorhabditis
+elegans (Worm) as provided by UCSC (ce6, May 2008) and stored in Biostrings
+objects.")
+    (license license:artistic2.0)))
+
 (define-public r-bsgenome-dmelanogaster-ucsc-dm6
   (package
     (name "r-bsgenome-dmelanogaster-ucsc-dm6")
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index ef65dd9..efe4c9b 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -8140,38 +8140,6 @@ the TxDb object of Mouse data as provided by UCSC (mm10, 
December 2011)
 based on the knownGene track.")
     (license license:artistic2.0)))
 
-(define-public r-bsgenome-celegans-ucsc-ce6
-  (package
-    (name "r-bsgenome-celegans-ucsc-ce6")
-    (version "1.4.0")
-    (source (origin
-              (method url-fetch)
-              ;; We cannot use bioconductor-uri here because this tarball is
-              ;; located under "data/annotation/" instead of "bioc/".
-              (uri (string-append "https://www.bioconductor.org/packages/";
-                                  "release/data/annotation/src/contrib/"
-                                  "BSgenome.Celegans.UCSC.ce6_"
-                                  version ".tar.gz"))
-              (sha256
-               (base32
-                "0mqzb353xv2c3m3vkb315dkmnxkgczp7ndnknyhpgjlybyf715v9"))))
-    (properties
-     `((upstream-name . "BSgenome.Celegans.UCSC.ce6")))
-    (build-system r-build-system)
-    ;; As this package provides little more than a very large data file it
-    ;; doesn't make sense to build substitutes.
-    (arguments `(#:substitutable? #f))
-    (propagated-inputs
-     `(("r-bsgenome" ,r-bsgenome)))
-    (home-page
-     "https://www.bioconductor.org/packages/BSgenome.Celegans.UCSC.ce6/";)
-    (synopsis "Full genome sequences for Worm")
-    (description
-     "This package provides full genome sequences for Caenorhabditis
-elegans (Worm) as provided by UCSC (ce6, May 2008) and stored in Biostrings
-objects.")
-    (license license:artistic2.0)))
-
 (define-public r-bsgenome-celegans-ucsc-ce10
   (package
     (name "r-bsgenome-celegans-ucsc-ce10")