Problem trying to build parallel application

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Problem trying to build parallel application

From:	Dave Nystrom
Subject:	Problem trying to build parallel application
Date:	Wed, 9 May 2001 14:19:58 -0600 (MDT)
Hi Guys,

I'm trying to build a parallel version of our application under RH Linux 6.2
using KCC-4.0d and am having compile problems.  Below is part of the build
log.  Could someone take a look at this and see what the problem is?  I think 
Stephen Smith might be a likely candidate.

-- 
Dave Nystrom                    email: address@hidden
LANL X-3                        phone: 505-667-7913     fax: 505-665-3046

---------------------------build-log-------------------------------------
cd /usr/projects/blanca/usr/wdn/blanca_src_4.0/ApplicationsLayer/Demo/
date; /usr/bin/time -p make RECURSE=1 PASS=MPI1 app

Setting csh aliases for Blanca source environment v 4.0 on host: mutley
Wed May  9 12:31:34 MDT 2001
COPYING... 
/usr/projects/blanca/packages/TecFramework/TecFramework_src/Main/main.cc to 
/scratch/wdn/obj_4.0/DEMO/LINUX_KCC_CART_XYZ_MPI/main.cc

COMPILING... See 
/scratch/wdn/obj_4.0/DEMO/LINUX_KCC_CART_XYZ_MPI/Demo_src/include/DemoPCH.o_MPI1.info

KCC -c 
/usr/projects/blanca/usr/wdn/blanca_src_4.0/ApplicationsLayer/Demo/Demo_src/include/DemoPCH.cc
 -o /scratch/wdn/obj_4.0/DEMO/LINUX_KCC_CART_XYZ_MPI/Demo_src/include/DemoPCH.o 
--output_dependencies 
/scratch/wdn/obj_4.0/DEMO/LINUX_KCC_CART_XYZ_MPI/Demo_src/include/DemoPCH.o.depend.mk.temp
 --diag_suppress 630 --create_pch 
/scratch/wdn/obj_4.0/DEMO/LINUX_KCC_CART_XYZ_MPI/DEMO_MPI1.pch -DTEC_USE_DEMO 
-DTEC_USE_PHYSICSBETA -DTEC_USE_HYDRODYNAMICS -DTEC_USE_PHYSICSSUPPORTBETA 
-DTEC_USE_PHYSICSBASECLASSES -DTEC_USE_POOMA2INTEGRATION -DTEC_USE_TECFRAMEWORK 
-DTEC_USE_POOMA2INSTANTIATIONS -DTEC_USE_STLINSTANTIATIONS -DTEC_USE_POOMA 
-DTEC_USE_CHEETAH -DTEC_USE_MM -DTEC_USE_PCG -DCART_XYZ -DDOUBLE_PRECISION 
-DPETE -DV034 -DTEC_NEW_POOMA_COMPRESSION -DTEC_LINUX -DTEC_USING_KCC_DEFINES 
-DTEC_KCC_INFINITE_COMPILE_TIME -DTEC_INST -DTEC_USE_PCH 
-I/usr/projects/blanca/usr/wdn/blanca_src_4.0/ApplicationsLayer/Demo 
-I/usr/projects/blanca/usr/wdn/blanca_src_4.0/PhysicsLayer/PhysicsBeta 
-I/usr/projects/blanca/usr/wdn/blanca_src_4.0/PhysicsLayer/Hydrodynamics 
-I/usr/projects/blanca/usr/wdn/blanca_src_4.0/PhysicsSupportLayer/PhysicsSupportBeta
 
-I/usr/projects/blanca/usr/wdn/blanca_src_4.0/PhysicsSupportLayer/PhysicsBaseClasses
 
-I/usr/projects/blanca/usr/wdn/blanca_src_4.0/TecIntegrationLayer/Pooma2Integration
 -I/usr/projects/blanca/packages/TecFramework 
-I/usr/projects/blanca/packages/BlancaInstantiations/Pooma2Instantiations 
-I/usr/projects/blanca/packages/BlancaInstantiations/STLInstantiations 
-I/usr/projects/blanca/packages/PoomaII/r2/src 
-I/usr/projects/blanca/packages/PoomaII/r2/lib/LINUX_KCC_DEBUG_CHEETAH_NOEX 
-I/usr/projects/blanca/packages/Cheetah/cheetah-1.0.0/src 
-I/usr/projects/blanca/packages/Cheetah/cheetah-1.0.0/lib/LINUX_KCC_DEBUG_NOEX 
-I/home/wdn/packages/mpich-1.2.1/include 
-I/usr/projects/blanca/packages/mm-1.1.1/include 
-I/usr/projects/blanca/packages/pcg/pcg_f77 --display_error_number -fpic 
--strict -D__KAI_STRICT --diag_suppress 450 --no_exceptions +K0 --no_kdebug

"/usr/projects/blanca/usr/wdn/blanca_src_4.0/ApplicationsLayer/Demo/Demo_src/include/DemoPCH.cc":
 creating precompiled header file 
"/scratch/wdn/obj_4.0/DEMO/LINUX_KCC_CART_XYZ_MPI/DEMO_MPI1.pch"
real 26.25
user 14.68
sys 4.94

Done compiling 
/scratch/wdn/obj_4.0/DEMO/LINUX_KCC_CART_XYZ_MPI/Demo_src/include/DemoPCH.o

COMPILING... See 
/scratch/wdn/obj_4.0/DEMO/LINUX_KCC_CART_XYZ_MPI/main.o_MPI1.info

KCC -c /scratch/wdn/obj_4.0/DEMO/LINUX_KCC_CART_XYZ_MPI/main.cc -o 
/scratch/wdn/obj_4.0/DEMO/LINUX_KCC_CART_XYZ_MPI/main.o --output_dependencies 
/scratch/wdn/obj_4.0/DEMO/LINUX_KCC_CART_XYZ_MPI/main.o.depend.mk.temp 
--diag_suppress 630 --COMPDO_fe_cc2c --pch_ignore_dir --use_pch 
/scratch/wdn/obj_4.0/DEMO/LINUX_KCC_CART_XYZ_MPI/DEMO_MPI1.pch -DTEC_USE_DEMO 
-DTEC_USE_PHYSICSBETA -DTEC_USE_HYDRODYNAMICS -DTEC_USE_PHYSICSSUPPORTBETA 
-DTEC_USE_PHYSICSBASECLASSES -DTEC_USE_POOMA2INTEGRATION -DTEC_USE_TECFRAMEWORK 
-DTEC_USE_POOMA2INSTANTIATIONS -DTEC_USE_STLINSTANTIATIONS -DTEC_USE_POOMA 
-DTEC_USE_CHEETAH -DTEC_USE_MM -DTEC_USE_PCG -DCART_XYZ -DDOUBLE_PRECISION 
-DPETE -DV034 -DTEC_NEW_POOMA_COMPRESSION -DTEC_LINUX -DTEC_USING_KCC_DEFINES 
-DTEC_KCC_INFINITE_COMPILE_TIME -DTEC_INST -DTEC_USE_PCH 
-I/usr/projects/blanca/usr/wdn/blanca_src_4.0/ApplicationsLayer/Demo 
-I/usr/projects/blanca/usr/wdn/blanca_src_4.0/PhysicsLayer/PhysicsBeta 
-I/usr/projects/blanca/usr/wdn/blanca_src_4.0/PhysicsLayer/Hydrodynamics 
-I/usr/projects/blanca/usr/wdn/blanca_src_4.0/PhysicsSupportLayer/PhysicsSupportBeta
 
-I/usr/projects/blanca/usr/wdn/blanca_src_4.0/PhysicsSupportLayer/PhysicsBaseClasses
 
-I/usr/projects/blanca/usr/wdn/blanca_src_4.0/TecIntegrationLayer/Pooma2Integration
 -I/usr/projects/blanca/packages/TecFramework 
-I/usr/projects/blanca/packages/BlancaInstantiations/Pooma2Instantiations 
-I/usr/projects/blanca/packages/BlancaInstantiations/STLInstantiations 
-I/usr/projects/blanca/packages/PoomaII/r2/src 
-I/usr/projects/blanca/packages/PoomaII/r2/lib/LINUX_KCC_DEBUG_CHEETAH_NOEX 
-I/usr/projects/blanca/packages/Cheetah/cheetah-1.0.0/src 
-I/usr/projects/blanca/packages/Cheetah/cheetah-1.0.0/lib/LINUX_KCC_DEBUG_NOEX 
-I/home/wdn/packages/mpich-1.2.1/include 
-I/usr/projects/blanca/packages/mm-1.1.1/include 
-I/usr/projects/blanca/packages/pcg/pcg_f77 --display_error_number -fpic 
--strict -D__KAI_STRICT --diag_suppress 450 --no_exceptions +K0 --no_kdebug

real 12.92
user 4.74
sys 0.56

Done compiling /scratch/wdn/obj_4.0/DEMO/LINUX_KCC_CART_XYZ_MPI/main.o

.........Stuff Deleted............

KCC -o 
/scratch/wdn/obj_4.0/HYDRODYNAMICS/LINUX_KCC_CART_XYZ_MPI/libhydrodynamics.so 
--COMPO_ln -Wl,-noinhibit-exec --no_exceptions --parallel_build 1 
/scratch/wdn/obj_4.0/HYDRODYNAMICS/LINUX_KCC_CART_XYZ_MPI/Hydrodynamics_src/HydrodynamicsGroup.o
 
/scratch/wdn/obj_4.0/HYDRODYNAMICS/LINUX_KCC_CART_XYZ_MPI/Hydrodynamics_src/CompatibleHydro/SymmetryRelations.o
 
/scratch/wdn/obj_4.0/HYDRODYNAMICS/LINUX_KCC_CART_XYZ_MPI/Hydrodynamics_src/CompatibleHydro/CompatibleRelations.o
 
/scratch/wdn/obj_4.0/HYDRODYNAMICS/LINUX_KCC_CART_XYZ_MPI/Hydrodynamics_src/CompatibleHydro/Commands/LagRadialVelocity.o
 
/scratch/wdn/obj_4.0/HYDRODYNAMICS/LINUX_KCC_CART_XYZ_MPI/Hydrodynamics_src/CompatibleHydro/Commands/SetBrickCoordinates.o
 
/scratch/wdn/obj_4.0/HYDRODYNAMICS/LINUX_KCC_CART_XYZ_MPI/Hydrodynamics_src/CompatibleHydro/Commands/SetFieldValues.o
 
/scratch/wdn/obj_4.0/HYDRODYNAMICS/LINUX_KCC_CART_XYZ_MPI/Hydrodynamics_src/CompatibleHydro/Commands/SetVertexPoints.o
 
/scratch/wdn/obj_4.0/HYDRODYNAMICS/LINUX_KCC_CART_XYZ_MPI/Hydrodynamics_src/EOS/GammaLaw.o
 
/scratch/wdn/obj_4.0/PHYSICSSUPPORTBETA/LINUX_KCC_CART_XYZ_MPI/libphysicssupportbeta.so
 
/scratch/wdn/obj_4.0/PHYSICSBASECLASSES/LINUX_KCC_CART_XYZ_MPI/libphysicsbaseclasses.so
 
/scratch/wdn/obj_4.0/POOMA2INTEGRATION/LINUX_KCC_CART_XYZ_MPI/libpooma2integration.so
 
/usr/projects/blanca/packages/TecFramework/lib/TECFRAMEWORK/LINUX_KCC_DEBUG_SHARED_NOEX/libtecframework.so
 
/usr/projects/blanca/packages/BlancaInstantiations/Pooma2Instantiations/lib/POOMA2INSTANTIATIONS/LINUX_KCC_DEBUG_CHEETAH_SHARED_NOEX/libpooma2instantiations.so
 
/usr/projects/blanca/packages/BlancaInstantiations/STLInstantiations/lib/STLINSTANTIATIONS/LINUX_KCC_DEBUG_SHARED_NOEX/libstlinstantiations.so
 
/usr/projects/blanca/packages/PoomaII/r2/lib/LINUX_KCC_DEBUG_CHEETAH_NOEX/libpooma.a

        cd "/home/wdn/blanca/usr/wdn/blanca_src_4.0/ApplicationsLayer/Demo"
"/usr/projects/blanca/packages/PoomaII/r2/src/Engine/MultiPatchEngine.cpp", 
line 252: error #135: 
          class "Engine<1, poomalote::Real, Remote<CompressibleBrick>>" has no
          member "makeOwnCopy"
      data()[i].makeOwnCopy();
                ^
          detected during:
            instantiation of "Engine<Dim, T, MultiPatch<LayoutTag,
                      PatchTag>>::Engine_t &Engine<Dim, T,
                      MultiPatch<LayoutTag, PatchTag>>::makeOwnCopy() [with
                      Dim=1, T=poomalote::Real, LayoutTag=GridTag,
                      PatchTag=Remote<CompressibleBrick>]" at line 482 of
                      "/usr/projects/blanca/packages/PoomaII/r2/src/NewField/Fi
                      eldEngine/FieldEngineBase.h"
            instantiation of "void FieldEngineBase<Dim, T,
                      EngineTag>::makeOwnCopy(const Subject &) [with Dim=1,
                      T=poomalote::Real,
                      EngineTag=poomalote::ModelTraits<poomalote::OneDF<poomalo
                      te::DefaultTraits>>::EngineTag,
                      Subject=Field<poomalote::ModelTraits<poomalote::OneDF<poo
                      malote::DefaultTraits>>::MeshTag, poomalote::Real,
                      poomalote::ModelTraits<poomalote::OneDF<poomalote::Defaul
                      tTraits>>::EngineTag>]" at line 983 of
                      "/usr/projects/blanca/packages/PoomaII/r2/src/NewField/Fi
                      eld.h"
            instantiation of "void Field<GeometryTag, T,
                      EngineTag>::makeOwnCopy() [with
                      GeometryTag=poomalote::ModelTraits<poomalote::OneDF<pooma
                      lote::DefaultTraits>>::MeshTag, T=poomalote::Real,
                      EngineTag=poomalote::ModelTraits<poomalote::OneDF<poomalo
                      te::DefaultTraits>>::EngineTag]" at line 69 of
                      "/usr/projects/blanca/usr/wdn/blanca_src_4.0/PhysicsSuppo
                      rtLayer/PhysicsBaseClasses/PhysicsBaseClasses_src/HelperC
                      lasses/MMField.t.hh"
            instantiation of "void
                      PhysicsBaseClasses::matMMWeightedAverage(const Field<G1,
                      T1, E1> &, const Field<MeshTag, poomalote::Real,
                      EngineTag> &, const Field<G1, T1, E1> &, bool) [with
                      MeshTag=poomalote::ModelTraits<poomalote::OneDF<poomalote
                      ::DefaultTraits>>::MeshTag, T=poomalote::Real,
                      EngineTag=poomalote::ModelTraits<poomalote::OneDF<poomalo
                      te::DefaultTraits>>::EngineTag]" at line 579 of
                      "/usr/projects/blanca/usr/wdn/blanca_src_4.0/PhysicsLayer
                      /Hydrodynamics/Hydrodynamics_src/CompatibleHydro/Compatib
                      leRelations.t.hh"
            instantiation of "void
                      Hydrodynamics::CompatibleRelations<Traits>::calcAvgQuanti
                      ty(const
                      Hydrodynamics::CompatibleRelations<Traits>::ScalarField
                      &, const
                      Hydrodynamics::CompatibleRelations<Traits>::ScalarField
                      &, const
                      Hydrodynamics::CompatibleRelations<Traits>::ScalarField
                      &) [with
                      Traits=poomalote::OneDF<poomalote::DefaultTraits>]" 

"/usr/projects/blanca/packages/PoomaII/r2/src/Engine/MultiPatchEngine.cpp", 
line 252: error #135: 
          class "Engine<2, poomalote::Real, Remote<CompressibleBrick>>" has no
          member "makeOwnCopy"
      data()[i].makeOwnCopy();
                ^
          detected during:
            instantiation of "Engine<Dim, T, MultiPatch<LayoutTag,
                      PatchTag>>::Engine_t &Engine<Dim, T,
                      MultiPatch<LayoutTag, PatchTag>>::makeOwnCopy() [with
                      Dim=2, T=poomalote::Real, LayoutTag=GridTag,
                      PatchTag=Remote<CompressibleBrick>]" at line 482 of
                      "/usr/projects/blanca/packages/PoomaII/r2/src/NewField/Fi
                      eldEngine/FieldEngineBase.h"
            instantiation of "void FieldEngineBase<Dim, T,
                      EngineTag>::makeOwnCopy(const Subject &) [with Dim=2,
                      T=poomalote::Real,
                      EngineTag=poomalote::ModelTraits<poomalote::TwoDF<poomalo
                      te::DefaultTraits>>::EngineTag,
                      Subject=Field<poomalote::ModelTraits<poomalote::TwoDF<poo
                      malote::DefaultTraits>>::MeshTag, poomalote::Real,
                      poomalote::ModelTraits<poomalote::TwoDF<poomalote::Defaul
                      tTraits>>::EngineTag>]" at line 983 of
                      "/usr/projects/blanca/packages/PoomaII/r2/src/NewField/Fi
                      eld.h"
            instantiation of "void Field<GeometryTag, T,
                      EngineTag>::makeOwnCopy() [with
                      GeometryTag=poomalote::ModelTraits<poomalote::TwoDF<pooma
                      lote::DefaultTraits>>::MeshTag, T=poomalote::Real,
                      EngineTag=poomalote::ModelTraits<poomalote::TwoDF<poomalo
                      te::DefaultTraits>>::EngineTag]" at line 69 of
                      "/usr/projects/blanca/usr/wdn/blanca_src_4.0/PhysicsSuppo
                      rtLayer/PhysicsBaseClasses/PhysicsBaseClasses_src/HelperC
                      lasses/MMField.t.hh"
            instantiation of "void
                      PhysicsBaseClasses::matMMWeightedAverage(const Field<G1,
                      T1, E1> &, const Field<MeshTag, poomalote::Real,
                      EngineTag> &, const Field<G1, T1, E1> &, bool) [with
                      MeshTag=poomalote::ModelTraits<poomalote::TwoDF<poomalote
                      ::DefaultTraits>>::MeshTag, T=poomalote::Real,
                      EngineTag=poomalote::ModelTraits<poomalote::TwoDF<poomalo
                      te::DefaultTraits>>::EngineTag]" at line 579 of
                      "/usr/projects/blanca/usr/wdn/blanca_src_4.0/PhysicsLayer
                      /Hydrodynamics/Hydrodynamics_src/CompatibleHydro/Compatib
                      leRelations.t.hh"
            instantiation of "void
                      Hydrodynamics::CompatibleRelations<Traits>::calcAvgQuanti
                      ty(const
                      Hydrodynamics::CompatibleRelations<Traits>::ScalarField
                      &, const
                      Hydrodynamics::CompatibleRelations<Traits>::ScalarField
                      &, const
                      Hydrodynamics::CompatibleRelations<Traits>::ScalarField
                      &) [with
                      Traits=poomalote::TwoDF<poomalote::DefaultTraits>]" 

"/usr/projects/blanca/packages/PoomaII/r2/src/Engine/MultiPatchEngine.cpp", 
line 252: error #135: 
          class "Engine<3, poomalote::Real, Remote<CompressibleBrick>>" has no
          member "makeOwnCopy"
      data()[i].makeOwnCopy();
                ^
          detected during:
            instantiation of "Engine<Dim, T, MultiPatch<LayoutTag,
                      PatchTag>>::Engine_t &Engine<Dim, T,
                      MultiPatch<LayoutTag, PatchTag>>::makeOwnCopy() [with
                      Dim=3, T=poomalote::Real, LayoutTag=GridTag,
                      PatchTag=Remote<CompressibleBrick>]" at line 482 of
                      "/usr/projects/blanca/packages/PoomaII/r2/src/NewField/Fi
                      eldEngine/FieldEngineBase.h"
            instantiation of "void FieldEngineBase<Dim, T,
                      EngineTag>::makeOwnCopy(const Subject &) [with Dim=3,
                      T=poomalote::Real,
                      EngineTag=poomalote::ModelTraits<poomalote::ThreeDF<pooma
                      lote::DefaultTraits>>::EngineTag,
                      Subject=Field<poomalote::ModelTraits<poomalote::ThreeDF<p
                      oomalote::DefaultTraits>>::MeshTag, poomalote::Real,
                      poomalote::ModelTraits<poomalote::ThreeDF<poomalote::Defa
                      ultTraits>>::EngineTag>]" at line 983 of
                      "/usr/projects/blanca/packages/PoomaII/r2/src/NewField/Fi
                      eld.h"
            instantiation of "void Field<GeometryTag, T,
                      EngineTag>::makeOwnCopy() [with
                      GeometryTag=poomalote::ModelTraits<poomalote::ThreeDF<poo
                      malote::DefaultTraits>>::MeshTag, T=poomalote::Real,
                      EngineTag=poomalote::ModelTraits<poomalote::ThreeDF<pooma
                      lote::DefaultTraits>>::EngineTag]" at line 69 of
                      "/usr/projects/blanca/usr/wdn/blanca_src_4.0/PhysicsSuppo
                      rtLayer/PhysicsBaseClasses/PhysicsBaseClasses_src/HelperC
                      lasses/MMField.t.hh"
            instantiation of "void
                      PhysicsBaseClasses::matMMWeightedAverage(const Field<G1,
                      T1, E1> &, const Field<MeshTag, poomalote::Real,
                      EngineTag> &, const Field<G1, T1, E1> &, bool) [with
                      MeshTag=poomalote::ModelTraits<poomalote::ThreeDF<poomalo
                      te::DefaultTraits>>::MeshTag, T=poomalote::Real,
                      EngineTag=poomalote::ModelTraits<poomalote::ThreeDF<pooma
                      lote::DefaultTraits>>::EngineTag]" at line 579 of
                      "/usr/projects/blanca/usr/wdn/blanca_src_4.0/PhysicsLayer
                      /Hydrodynamics/Hydrodynamics_src/CompatibleHydro/Compatib
                      leRelations.t.hh"
            instantiation of "void
                      Hydrodynamics::CompatibleRelations<Traits>::calcAvgQuanti
                      ty(const
                      Hydrodynamics::CompatibleRelations<Traits>::ScalarField
                      &, const
                      Hydrodynamics::CompatibleRelations<Traits>::ScalarField
                      &, const
                      Hydrodynamics::CompatibleRelations<Traits>::ScalarField
                      &) [with
                      Traits=poomalote::ThreeDF<poomalote::DefaultTraits>]" 

3 errors detected in the compilation of 
"/usr/projects/blanca/usr/wdn/blanca_src_4.0/PhysicsLayer/Hydrodynamics/Hydrodynamics_src/CompatibleHydro/CompatibleRelations.cc".
driver: Compilation failed.
        Recompiling 
/scratch/wdn/obj_4.0/HYDRODYNAMICS/LINUX_KCC_CART_XYZ_MPI/Hydrodynamics_src/CompatibleHydro/CompatibleRelations.o
Error: Unable to recompile 
/scratch/wdn/obj_4.0/HYDRODYNAMICS/LINUX_KCC_CART_XYZ_MPI/Hydrodynamics_src/CompatibleHydro/CompatibleRelations.o.
Command exited with non-zero status 2
real 279.50
user 0.28
sys 0.01
mv: 
/scratch/wdn/obj_4.0/HYDRODYNAMICS/LINUX_KCC_CART_XYZ_MPI/libhydrodynamics.so: 
No such file or directory
make[1]: *** 
[/scratch/wdn/obj_4.0/HYDRODYNAMICS/LINUX_KCC_CART_XYZ_MPI/libhydrodynamics.so] 
Error 1
make: *** 
[/scratch/wdn/obj_4.0/HYDRODYNAMICS/LINUX_KCC_CART_XYZ_MPI/libhydrodynamics.so] 
Error 2
Command exited with non-zero status 2
real 5983.14
user 2052.11
sys 160.74

Compilation exited abnormally with code 2 at Wed May  9 14:11:17
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