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[myexperiment-hackers] [3332] branches/wf4ever: WFE-811 More workflow ru


From: noreply
Subject: [myexperiment-hackers] [3332] branches/wf4ever: WFE-811 More workflow run descriptions
Date: Tue, 22 Jan 2013 16:18:41 +0000 (UTC)

Revision
3332
Author
stain
Date
2013-01-22 16:18:41 +0000 (Tue, 22 Jan 2013)

Log Message

WFE-811 More workflow run descriptions

Modified Paths

Diff

Modified: branches/wf4ever/app/views/research_objects/_rundescription.rhtml (3331 => 3332)


--- branches/wf4ever/app/views/research_objects/_rundescription.rhtml	2013-01-22 16:03:25 UTC (rev 3331)
+++ branches/wf4ever/app/views/research_objects/_rundescription.rhtml	2013-01-22 16:18:41 UTC (rev 3332)
@@ -1,7 +1,24 @@
     <div class="annotation mockup">
         <h3 class="type">Description</h3>
         <div class="body">
-The workflow maps a SNP (dbSNP id) to a gene (EntrezGene id).
+          <p>
+          The workflow maps a SNP (dbSNP id) to a gene (EntrezGene id).
+          </p>
+          <section>
+            <h4>Purpose</h4>
+            <p>
+            The purpose of this workflow is to take the GWAS output consisting of SNP-metabolite associations and return genes present in the vicinity of the SNP ( for example, ~ 100 kb of the snp) and the pathways that these genes participate in. The user is provided with the choice of setting the flanking width to interrogate around the SNP.
+          </p>
+          </section>
+          
+          <section>
+            <h4>Background</h4>
+            <p>
+            Genome-Wide Association studies (GWAS) with metabolomic phenotypes yield several statistically significant SNP-metabolite associations. To understand the biological basis of the association, scientists typically dwell on identifying genes in the vicinity of the SNP and the possible pathways that the gene participates in. The information needed to arrive at an understanding of the mechanistic basis of the association requires integration of disparate data sources.             
+            </p>
+          </section>
+          
+
         </div>
         <div class="provenance">
           <span class="authoredBy">Kristina Hettne</span> on 

Modified: branches/wf4ever/app/views/research_objects/_startedby.rhtml (3331 => 3332)


--- branches/wf4ever/app/views/research_objects/_startedby.rhtml	2013-01-22 16:03:25 UTC (rev 3331)
+++ branches/wf4ever/app/views/research_objects/_startedby.rhtml	2013-01-22 16:18:41 UTC (rev 3332)
@@ -7,5 +7,8 @@
             <span class="createdOn">on 2012-12-24 18:40</span>
           </div>      
           <div>using Taverna Server 2.4.0 at <code>http://example.com/taverna-server/</code></div>
+
+          <div class="runcomment"><strong>Comment:</strong> Example run with simple inputs</div>
+          
         </div>
      </div>  
\ No newline at end of file

Modified: branches/wf4ever/public/stylesheets/styles.css (3331 => 3332)


--- branches/wf4ever/public/stylesheets/styles.css	2013-01-22 16:03:25 UTC (rev 3331)
+++ branches/wf4ever/public/stylesheets/styles.css	2013-01-22 16:18:41 UTC (rev 3332)
@@ -2587,3 +2587,10 @@
   font-size: smaller; 
   text-align: center;
 }
+.runcomment {
+  border: #cde 1px dotted;
+  background: #ffd;
+  padding: 1em;
+  margin: 0.4em;
+  font-style: italic;
+}
\ No newline at end of file

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