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02/324: guix: Update to Bioconductor 3.13.
From: |
guix-commits |
Subject: |
02/324: guix: Update to Bioconductor 3.13. |
Date: |
Sat, 5 Jun 2021 03:14:23 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit c343c3bc1f1310ca1075491ed48fe2db16b978a7
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Sat Jun 5 01:37:51 2021 +0200
guix: Update to Bioconductor 3.13.
* guix/build-system/r.scm (bioconductor-uri): Update version.
* guix/import/cran.scm (%bioconductor-version): Update.
---
guix/build-system/r.scm | 2 +-
guix/import/cran.scm | 4 ++--
2 files changed, 3 insertions(+), 3 deletions(-)
diff --git a/guix/build-system/r.scm b/guix/build-system/r.scm
index e2bf41f..5e4b23c 100644
--- a/guix/build-system/r.scm
+++ b/guix/build-system/r.scm
@@ -59,7 +59,7 @@ release corresponding to NAME and VERSION."
"/src/contrib/"
name "_" version ".tar.gz")
;; TODO: use %bioconductor-version from (guix import cran)
- (string-append "https://bioconductor.org/packages/3.12"
+ (string-append "https://bioconductor.org/packages/3.13"
type-url-part
"/src/contrib/"
name "_" version ".tar.gz"))))
diff --git a/guix/import/cran.scm b/guix/import/cran.scm
index dbc858c..f649928 100644
--- a/guix/import/cran.scm
+++ b/guix/import/cran.scm
@@ -153,9 +153,9 @@ package definition."
(define %cran-canonical-url "https://cran.r-project.org/package=")
(define %bioconductor-url "https://bioconductor.org/packages/")
-;; The latest Bioconductor release is 3.12. Bioconductor packages should be
+;; The latest Bioconductor release is 3.13. Bioconductor packages should be
;; updated together.
-(define %bioconductor-version "3.12")
+(define %bioconductor-version "3.13")
(define* (bioconductor-packages-list-url #:optional type)
(string-append "https://bioconductor.org/packages/"
- branch master updated (7382aa0 -> 8f12002), guix-commits, 2021/06/05
- 01/324: gnu: pigx-rnaseq: Update to 0.0.13., guix-commits, 2021/06/05
- 02/324: guix: Update to Bioconductor 3.13.,
guix-commits <=
- 04/324: gnu: Add r-ggnewscale., guix-commits, 2021/06/05
- 03/324: gnu: Add r-aplot., guix-commits, 2021/06/05
- 09/324: gnu: Add r-scaledmatrix., guix-commits, 2021/06/05
- 05/324: gnu: Add r-ggpointdensity., guix-commits, 2021/06/05
- 10/324: gnu: Add r-treeio., guix-commits, 2021/06/05
- 11/324: gnu: Add r-ggtree., guix-commits, 2021/06/05
- 06/324: gnu: Add r-arrow., guix-commits, 2021/06/05
- 18/324: gnu: r-cytolib: Update to 2.4.0., guix-commits, 2021/06/05
- 16/324: gnu: r-mzr: Update to 2.26.0., guix-commits, 2021/06/05
- 19/324: gnu: r-ncdfflow: Update to 2.38.0., guix-commits, 2021/06/05