bug#66985: 29.1; Issue with `package.el` upgrading builtin (edge-case)

[Philip Kaludercic]

Sylvain Bougerel <sylvain.bougerel.devel@gmail.com> writes:

> The following issue seem to occur with emacs-29.1 only. Emacs-27.1 and
> emacs-28.1 were also tested but do not seem to suffer from the problem.
>
>
> Issue observed:
>
> Likelihood of error in `package-compute-transaction` form `package.el`,
> that could lead to builtin packages being upgraded even if it's not
> necessary, due to an edge-case.
>
>
> Background:
>
> Unfortunately, authors/maintainers of `compat` likely made a
> mistake setting its requirements (see:
> https://github.com/emacs-compat/compat/blob/main/compat.el#L9):
>
>     ;; Package-Requires: ((emacs "24.4") (seq "2.3"))
>
> `(seq "2.3")` is a version in the future, since `seq.el` is currently at
> version 2.24.
>
> After installing this package, however, any package that depend
> on `seq` too will result in `package.el` calculating that the built-in `seq`
> must also be upgraded (and downloaded) even while, Emacs already has the
> latest version (2.24) and when `package-install-upgrade-built-in` is not set.
>
>
> Steps to reproduce:
>
> This step shows that prior to installing `compat`, only `compat` is
> requested:
>
>      shell > [ -d ~/tmp-cache ] && rm -rf ~/tmp-cache
>      shell > emacs --no-site-file --batch \
>      --eval "(progn \
>        (require 'package) \
>        (setq package-user-dir \"~/tmp-cache\") \
>        (add-to-list 'package-archives '(\"melpa\" .
> \"http://melpa.org/packages/\";)) \
>        (add-to-list 'package-archives '(\"nongnu\" .
> \"https://elpa.nongnu.org/nongnu/\";)) \
>        (package-initialize) \
>        (package-refresh-contents) \
>        (print (mapcar #'package-desc-name (package-compute-transaction
> () (list (list 'compat))))))"
>      ...
>      (compat)
>
> This step requests the package `git-commit` which depends on `compat`,
> *on a fresh install without compat*:
>
>     shell > [ -d ~/tmp-cache ] && rm -rf ~/tmp-cache
>     shell > emacs --no-site-file --batch \
>     --eval "(progn \
>       (require 'package) \
>       (setq package-user-dir \"~/tmp-cache\") \
>       (add-to-list 'package-archives '(\"melpa\" .
> \"http://melpa.org/packages/\";)) \
>       (add-to-list 'package-archives '(\"nongnu\" .
> \"https://elpa.nongnu.org/nongnu/\";)) \
>       (package-initialize) \
>       (package-refresh-contents) \
>       (print (mapcar #'package-desc-name (package-compute-transaction
> () (list (list 'git-commit))))))"
>     ...
>     (compat with-editor transient git-commit)
>
> Again, we request the package `git-commit`, but this time, the install
> is not "fresh", we install `compat` first.
>
>     shell > [ -d ~/tmp-cache ] && rm -rf ~/tmp-cache
>     shell > emacs --no-site-file --batch \
>     --eval "(progn \
>       (require 'package) \
>       (setq package-user-dir \"~/tmp-cache\") \
>       (add-to-list 'package-archives '(\"melpa\" .
> \"http://melpa.org/packages/\";)) \
>       (add-to-list 'package-archives '(\"nongnu\" .
> \"https://elpa.nongnu.org/nongnu/\";)) \
>       (package-initialize) \
>       (package-refresh-contents) \
>       (package-install 'compat) \
>       (print (mapcar #'package-desc-name (package-compute-transaction
> () (list (list 'git-commit))))))"
>     ...
>     (with-editor seq transient git-commit)
>
> Here the issue shows itself, `seq` is now requested for installation,
> which is incorrect, since Emacs already have the latest version.

I think we can narrow down the issue to

  (package-installed-p 'seq '(2 3))

being t or nil.  Despite having 2.24 installed on Emacs 30.0, it
indicates that the package is installed.  What does it say when
evaluating this on Emacs 29?

Other values of interest

  (package-installed-p 'seq '(2 0))   ;=> t
  (package-installed-p 'seq '(2 23))  ;=> t
  (package-installed-p 'seq '(2 24))  ;=> t
  (package-installed-p 'seq '(2 25))  ;=> nil
  (package-installed-p 'seq '(2 26))  ;=> nil
  (package-installed-p 'seq '(2 100)) ;=> nil

> Attempting to install `seq` does not install cleanly (See:
> https://lists.gnu.org/archive/html/emacs-devel/2023-11/msg00235.html)
>
>
>
> My own Emacs version information was included in the bug report, and thus is
> kept as-is:
>
>
> In GNU Emacs 29.1 (build 1, x86_64-pc-linux-gnu, GTK+ Version 3.24.38,
> cairo version 1.17.8)
> System Description: Arch Linux
>
> Configured using:
>  'configure --with-pgtk --with-native-compilation=aot --sysconfdir=/etc
>  --prefix=/usr --libexecdir=/usr/lib --with-tree-sitter
>  --localstatedir=/var --with-cairo --disable-build-details
>  --with-harfbuzz --with-libsystemd --with-modules 'CFLAGS=-march=x86-64
>  -mtune=generic -O2 -pipe -fno-plt -fexceptions -Wp,-D_FORTIFY_SOURCE=2
>  -Wformat -Werror=format-security -fstack-clash-protection
>  -fcf-protection -g
>  -ffile-prefix-map=/build/emacs/src=/usr/src/debug/emacs -flto=auto'
>  'LDFLAGS=-Wl,-O1,--sort-common,--as-needed,-z,relro,-z,now -flto=auto'
>  'CXXFLAGS=-march=x86-64 -mtune=generic -O2 -pipe -fno-plt -fexceptions
>  -Wp,-D_FORTIFY_SOURCE=2 -Wformat -Werror=format-security
>  -fstack-clash-protection -fcf-protection -Wp,-D_GLIBCXX_ASSERTIONS -g
>  -ffile-prefix-map=/build/emacs/src=/usr/src/debug/emacs -flto=auto''
>
> Configured features:
> ACL CAIRO DBUS FREETYPE GIF GLIB GMP GNUTLS GPM GSETTINGS HARFBUZZ JPEG
> JSON LCMS2 LIBOTF LIBSYSTEMD LIBXML2 MODULES NATIVE_COMP NOTIFY INOTIFY
> PDUMPER PGTK PNG RSVG SECCOMP SOUND SQLITE3 THREADS TIFF
> TOOLKIT_SCROLL_BARS TREE_SITTER WEBP XIM GTK3 ZLIB
>
> Important settings:
>   value of $LC_MONETARY: en_GB.UTF-8
>   value of $LC_NUMERIC: en_GB.UTF-8
>   value of $LC_TIME: en_GB.UTF-8
>   value of $LANG: en_US.UTF-8
>   value of $XMODIFIERS: @im=ibus
>   locale-coding-system: utf-8-unix
>
> Major mode: Lisp Interaction
>
> Minor modes in effect:
>   highlight-quoted-mode: t
>   rainbow-delimiters-mode: t
>   solaire-global-mode: t
>   solaire-mode: t
>   persp-mode: t
>   org-roam-db-autosync-mode: t
>   outline-minor-mode: t
>   yas-global-mode: t
>   yas-minor-mode: t
>   doom-modeline-mode: t
>   eros-mode: t
>   vi-tilde-fringe-mode: t
>   highlight-numbers-mode: t
>   display-line-numbers-mode: t
>   hl-todo-mode: t
>   highlight-indent-guides-mode: t
>   copilot-mode: t
>   which-key-mode: t
>   savehist-mode: t
>   better-jumper-mode: t
>   better-jumper-local-mode: t
>   company-box-mode: t
>   global-company-mode: t
>   company-mode: t
>   vertico-mode: t
>   marginalia-mode: t
>   volatile-highlights-mode: t
>   recentf-mode: t
>   save-place-mode: t
>   global-so-long-mode: t
>   global-git-commit-mode: t
>   shell-dirtrack-mode: t
>   server-mode: t
>   envrc-global-mode: t
>   envrc-mode: t
>   gcmh-mode: t
>   global-hl-line-mode: t
>   hl-line-mode: t
>   winner-mode: t
>   smartparens-global-mode: t
>   smartparens-mode: t
>   ws-butler-global-mode: t
>   ws-butler-mode: t
>   global-emojify-mode: t
>   emojify-mode: t
>   undo-fu-session-global-mode: t
>   undo-fu-session-mode: t
>   undo-fu-mode: t
>   flycheck-popup-tip-mode: t
>   global-flycheck-mode: t
>   flycheck-mode: t
>   repeat-mode: t
>   delete-selection-mode: t
>   projectile-mode: t
>   +popup-mode: t
>   global-ligature-mode: t
>   ligature-mode: t
>   override-global-mode: t
>   general-override-mode: t
>   apheleia-global-mode: t
>   apheleia-mode: t
>   global-eldoc-mode: t
>   eldoc-mode: t
>   show-paren-mode: t
>   electric-indent-mode: t
>   mouse-wheel-mode: t
>   prettify-symbols-mode: t
>   file-name-shadow-mode: t
>   global-font-lock-mode: t
>   font-lock-mode: t
>   window-divider-mode: t
>   size-indication-mode: t
>   column-number-mode: t
>   line-number-mode: t
>   transient-mark-mode: t
>   auto-composition-mode: t
>   auto-encryption-mode: t
>   auto-compression-mode: t
>
> Load-path shadows:
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> hides /usr/share/emacs/site-lisp/cmake-mode
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> hides /usr/share/emacs/29.1/lisp/transient
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> hides /usr/share/emacs/29.1/lisp/jsonrpc
> /home/sylvain/.emacs.d/.local/straight/build-29.1/use-package/use-package-bind-key
> hides /usr/share/emacs/29.1/lisp/use-package/use-package-bind-key
> /home/sylvain/.emacs.d/.local/straight/build-29.1/use-package/use-package-ensure
> hides /usr/share/emacs/29.1/lisp/use-package/use-package-ensure
> /home/sylvain/.emacs.d/.local/straight/build-29.1/use-package/use-package-core
> hides /usr/share/emacs/29.1/lisp/use-package/use-package-core
> /home/sylvain/.emacs.d/.local/straight/build-29.1/use-package/use-package
> hides /usr/share/emacs/29.1/lisp/use-package/use-package
> /home/sylvain/.emacs.d/.local/straight/build-29.1/use-package/use-package-lint
> hides /usr/share/emacs/29.1/lisp/use-package/use-package-lint
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> hides /usr/share/emacs/29.1/lisp/use-package/bind-key
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>
> Features:
> (shadow sort mail-extr emacsbug cl-print mm-archive gnutls
> network-stream url-cache url-http url-auth url-gw nsm magit-extras
> company-ispell company-dabbrev vc-hg vc-svn vc bug-reference vterm tramp
> tramp-loaddefs trampver tramp-integration files-x tramp-compat
> parse-time term ehelp vterm-module term/xterm xterm apheleia-core
> apheleia apheleia-utils tabify misearch multi-isearch anzu
> company-yasnippet elisp-demos helpful cc-langs cc-vars cc-defs trace
> edebug debug backtrace info-look info help-fns radix-tree elisp-refs
> consult-flycheck consult magit-bookmark bookmark vertico-directory
> mule-util smartparens-markdown markdown-mode edit-indirect goto-addr
> hide-mode-line org-eldoc writegood-mode toc-org org-superstar
> org-fancy-priorities org-appear mixed-pitch org-crypt org-indent
> image-file image-converter oc-basic ol-bibtex bibtex iso8601
> highlight-quoted rainbow-delimiters dired-aux diredfl dired-x disp-table
> spell-fu ispell yaml-mode git-gutter-fringe fringe-helper git-gutter
> vc-git vc-dispatcher jka-compr auto-minor-mode whitespace make-mode
> vertico-repeat pulse doom-themes-ext-org solaire-mode face-remap
> doom-one-theme doom-themes doom-themes-base persp-mode org-agenda
> org-roam-logseq org-roam-migrate org-roam-log org-roam-mode
> org-roam-capture org-roam-id org-roam-node org-roam-db
> emacsql-sqlite-builtin sqlite org-roam-utils org-roam-compat org-roam
> org-capture org-attach smartparens-org org-yt org-element org-persist
> xdg org-id org-refile org-element-ast inline avl-tree org noutline
> outline ob-emacs-lisp org-table ob ob-tangle ol ob-ref ob-lob ob-table
> ob-exp org-macro org-src company-shell sh-script smie treesit executable
> org-keys oc ob-comint org-pcomplete org-list org-footnote org-entities
> org-faces cal-menu calendar cal-loaddefs emacsql-sqlite
> emacsql-sqlite-common emacsql emacsql-compiler magit-todos pcre2el rxt
> re-builder async magit-autoloads magit-submodule magit-blame magit-stash
> magit-reflog magit-bisect magit-push magit-pull magit-fetch magit-clone
> magit-remote magit-commit magit-sequence magit-notes magit-worktree
> magit-tag magit-merge magit-branch magit-reset magit-files magit-refs
> magit-status magit magit-repos magit-apply magit-wip magit-log
> which-func magit-diff smerge-mode diff diff-mode magit-core
> magit-autorevert autorevert filenotify magit-margin magit-transient
> magit-process magit-mode doom-snippets doom-snippets-lib yasnippet
> elisp-mode doom-modeline doom-modeline-segments doom-modeline-env
> doom-modeline-core shrink-path f f-shortdoc flycheck-cask eros
> vi-tilde-fringe highlight-numbers parent-mode display-line-numbers
> hl-todo highlight-indent-guides color copilot copilot-balancer
> editorconfig editorconfig-core editorconfig-core-handle
> editorconfig-fnmatch s jsonrpc which-key savehist better-jumper
> nerd-icons nerd-icons-faces nerd-icons-data nerd-icons-data-mdicon
> nerd-icons-data-flicon nerd-icons-data-codicon nerd-icons-data-devicon
> nerd-icons-data-sucicon nerd-icons-data-wicon nerd-icons-data-faicon
> nerd-icons-data-powerline nerd-icons-data-octicon
> nerd-icons-data-pomicon nerd-icons-data-ipsicon company-box
> company-box-doc frame-local company-box-icons all-the-icons
> all-the-icons-faces data-material data-weathericons data-octicons
> data-fileicons data-faicons data-alltheicons company-capf company
> vertico orderless marginalia etags fileloop generator xref
> volatile-highlights recentf tree-widget wid-edit saveplace so-long
> git-commit magit-git magit-base magit-section cursor-sensor crm
> with-editor shell pcomplete transient server log-edit message sendmail
> yank-media puny dired dired-loaddefs rfc822 mml mml-sec epa epg rfc6068
> epg-config gnus-util mm-decode mm-bodies mm-encode mail-parse rfc2231
> rfc2047 rfc2045 mm-util ietf-drums mail-prsvr mailabbrev mail-utils
> gmm-utils mailheader pcvs-util add-log compat envrc inheritenv gcmh
> hl-line winner smartparens-config smartparens-text smartparens loadhist
> ws-butler emojify apropos tar-mode arc-mode archive-mode ht
> undo-fu-session undo-fu flycheck-popup-tip popup flycheck-package
> package-lint imenu finder finder-inf doom-packages package browse-url
> url-handlers flycheck find-func dash autosync-magit gptel gptel-openai
> url url-proxy url-privacy url-expand url-methods url-history url-cookie
> generate-lisp-file url-domsuf url-util url-parse auth-source eieio
> eieio-core password-cache json map url-vars mailcap repeat delsel
> projectile project byte-opt lisp-mnt grep compile text-property-search
> comint ansi-osc ansi-color ring ibuf-ext ibuffer ibuffer-loaddefs
> thingatpt let-alist ob-core org-cycle org-fold org-fold-core org-compat
> ob-eval org-version org-macs format-spec ligature derived edmacro kmacro
> use-package-bind-key bind-key dtrt-indent advice time-date comp
> comp-cstr warnings icons doom-editor doom-projects doom-ui easy-mmode
> doom-keybinds pp cl-extra help-mode use-package-core bytecomp
> byte-compile general tex-site rx realgud-recursive-autoloads doom-start
> doom-modules cl-seq doom doom-lib cl-macs cl-loaddefs cl-lib pcase gv
> harfbuzz jansson dynamic-modules subr-x rmc iso-transl tooltip cconv
> eldoc paren electric uniquify ediff-hook vc-hooks lisp-float-type mwheel
> term/pgtk-win pgtk-win term/common-win pgtk-dnd tool-bar dnd fontset
> image regexp-opt fringe tabulated-list replace newcomment text-mode
> lisp-mode prog-mode register page tab-bar menu-bar rfn-eshadow isearch
> easymenu timer select scroll-bar mouse jit-lock font-lock syntax
> font-core term/tty-colors frame minibuffer nadvice seq simple cl-generic
> indonesian philippine cham georgian utf-8-lang misc-lang vietnamese
> tibetan thai tai-viet lao korean japanese eucjp-ms cp51932 hebrew greek
> romanian slovak czech european ethiopic indian cyrillic chinese
> composite emoji-zwj charscript charprop case-table epa-hook
> jka-cmpr-hook help abbrev obarray oclosure cl-preloaded button loaddefs
> theme-loaddefs faces cus-face macroexp files window text-properties
> overlay sha1 md5 base64 format env code-pages mule custom widget keymap
> hashtable-print-readable backquote threads dbusbind inotify
> dynamic-setting system-font-setting font-render-setting cairo gtk pgtk
> lcms2 multi-tty make-network-process native-compile emacs)
>
> Memory information:
> ((conses 16 3245234 195176)
>  (symbols 48 82161 1)
>  (strings 32 684237 38311)
>  (string-bytes 1 18697768)
>  (vectors 16 212303)
>  (vector-slots 8 6473676 156957)
>  (floats 8 2362 1249)
>  (intervals 56 257960 1370)
>  (buffers 984 56))