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Re: [igraph] Motifs in igraph
From: |
Szabolcs Horvát |
Subject: |
Re: [igraph] Motifs in igraph |
Date: |
Fri, 19 Oct 2018 09:59:13 +0200 |
You can use subgraph_isomorphisms with the lad method and induced=TRUE
http://igraph.org/r/doc/subgraph_isomorphisms.html
It will tell you where exactly the motif (i.e. induced subgraph)
appears in the graph.
On Fri, 19 Oct 2018 at 01:15, Stuart Kininmonth
<address@hidden> wrote:
>
>
>
> Hi Igraphers’,
>
>
>
> Has anybody developed code in R or python that can find motifs of various
> configurations (from 3 and 4 node motifs) that also keeps a list of the node
> identities?
>
> This would then enable me to see the relationship of the node to the other
> nodes via the shared motifs.
>
>
>
> With thanks
>
>
>
> Stuart
>
>
>
>
>
> Stuart Kininmonth PhD
>
> Deputy Head of School
> Senior Lecturer
>
> :Coral Reef Ecology and Management
> :Marine Spatial Planning
>
> :Marine Geology
> School of Marine Studies
> Faculty of Science, Technology & Environment
> The University of South Pacific
> Laucala Bay Road, Suva, Fiji Islands
> Tel: (+679) 32 32943 Ext.: 32943
>
> address@hidden
>
> M: +679 8660103
>
>
>
>
>
>
>
>
>
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