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Re: [igraph] Data structure of network


From: Wang Bing
Subject: Re: [igraph] Data structure of network
Date: Wed, 10 Apr 2013 10:05:53 +0900

As the data you shown, each row should be the neighboring nodes. The node index starts from 0.

for example:  for node 0: it has neighbors: 1  2  3  4  5  6  7  8 10 11 12 13 17 19 21 31.


Best Wishes,
Bing



Researcher
FIRST, Aihara Innovative Mathematical Modelling Project, JST,
4-6-1 Komaba, Meguro-ku, Tokyo 153-8505, Japan
E-mail: address@hidden


On Wed, Apr 10, 2013 at 9:32 AM, Zhige Xin <address@hidden> wrote:
Hi dear all,

Could someone tell me what the data structure of network in the following code? Or 

how can I visit any node in this network?  


import igraph as nx

net_path = "/home/username/Documents/karate.gml"

network = nx.read(net_path)

print network


BTW, after I print it out, it shows: 

IGRAPH U--- 34 78 --
+ attr: id (v)
+ edges:
 0 --  1  2  3  4  5  6  7  8 10 11 12 13 17 19 21 31
 1 --  0  2  3  7 13 17 19 21 30
 2 --  0  1  3  7  8  9 13 27 28 32
 3 --  0  1  2  7 12 13
 4 --  0  6 10
 5 --  0  6 10 16
 6 --  0  4  5 16
 7 --  0  1  2  3
 8 --  0  2 30 32 33
 9 --  2 33
10 --  0  4  5
11 --  0
12 --  0  3
13 --  0  1  2  3 33
14 -- 32 33
15 -- 32 33
16 --  5  6
17 --  0  1
18 -- 32 33
19 --  0  1 33
20 -- 32 33
21 --  0  1
22 -- 32 33
23 -- 25 27 29 32 33
24 -- 25 27 31
25 -- 23 24 31
26 -- 29 33
27 --  2 23 24 33
28 --  2 31 33
29 -- 23 26 32 33
30 --  1  8 32 33
31 --  0 24 25 28 32 33
32 --  2  8 14 15 18 20 22 23 29 30 31 33
33 --  8  9 13 14 15 18 19 20 22 23 26 27 28 29 30 31 32

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