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From: | S. M. Ali Abbas |
Subject: | [igraph] Collapsing/Folding graph based on vertex attributes |
Date: | Tue, 11 Sep 2012 14:58:03 +0100 |
User-agent: | Mozilla/5.0 (Windows NT 6.1; WOW64; rv:15.0) Gecko/20120824 Thunderbird/15.0 |
Hi folks, I have got a graph with this detail: > summary(g) IGRAPH UN-- 7690383 7839216 -- attr: Ethnic.Group(v/c), Geographical.Area (v/c), Religion (v/c), Major.Language (v/c) I'd like to collapse/reduce my graph to a new graph, where the vertices are grouped together according to their Ethnic.Group attribute, for instance, and then visualize the edges between them. As an example, all vertices with a certain ethnicity, X, should be grouped together (the size of the new vertex should correspond to the number of vertices with X as their ethnicity), and the edge would also be weighted (the number of links between ethnicity X and Y). For visualization of the whole graph, I used Gephi which supports grouping of vertices, but unfortunately my system can't handle such a big graph - of 1G size. I'd like to reduce the graph using igraph, and then export it to Gephi for visualization. Thanks! Cheers, Ali |
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