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bio-formats package for octave released


From: Carnë Draug
Subject: bio-formats package for octave released
Date: Tue, 15 Sep 2015 18:31:01 +0100

Hi everyone

the bio-formats project [1] has released for the first time an Octave
interface [2] to their java library.

Bio-formats is a library for reading microscopy image data and metadata.
They manage to read over 140 formats, most of them proprietary.

Note that this is not an Octave-Forge release, so you will have to
download the tarball manually and install it via "pkg install ...tar.gz".

It also requires that the bioformats library be available on the
system [3] and in the static javaclasspath (the file javaclasspath.txt
on the home directory must have a line with the path for bioformats.jar).

Carnë

[1] http://www.openmicroscopy.org/site/products/bio-formats
[2] 
http://downloads.openmicroscopy.org/bio-formats/5.1.4/artifacts/bioformats-octave-5.1.4.tar.gz
[3] 
http://the-right-way-to.blogspot.co.uk/2015/07/install-bioformats-in-debian-and-ubuntu.html



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