Re: FW: ../src/liboctinterp.so: undefined reference to `__cxa_guard_acquire'

[David Bateman]

Letizia MAZZURCO wrote:
>  Hi Thomas,
>
> I have not received answer yet.
> For me is very urgent.
>
> Thanks.
> Regards,
> Letizia M.
>
> -----Original Message-----
> From: letizia mazzurco [mailto:address@hidden 
> Sent: Monday, May 21, 2007 11:26 AM
> To: 'Thomas Treichl'
> Cc: 'address@hidden'
> Subject: RE: ../src/liboctinterp.so: undefined reference to
> `__cxa_guard_acquire'
>
>  Hi Thomas,
>
> I try, but the message is the same :
>
> ........
> Octave is now configured for i686-pc-linux-gnu
>
>   Source directory:     .
>   Installation prefix:  /sw/foss/octave/octave-2.9.10/Linux.i686/
>   C compiler:           gcc  -mieee-fp  -Wall -W -Wshadow -g -O2
>   C++ compiler:         g++  -mieee-fp  -Wall -W -Wshadow -Wold-style-cast
> -g -O2
>   Fortran compiler:     gfortran -O -mieee-fp
>   Fortran libraries:
> -L/misc/sw1/foss/gfortran/linux/irun/bin/../lib/gcc/i386-pc-linux-gnu/4.3.0
> -L/misc/sw1/foss/gfortran/linux/irun/bin/../lib/gcc
> -L/misc/sw1/foss/gfortran/linux/irun/bin/../lib/gcc/i386-pc-linux-gnu/4.3.0/
> ../../.. -lhdf5 -lz -lgfortranbegin -lgfortran -lm
>   BLAS libraries:       
>   FFTW libraries:       -lfftw3
>   GLPK libraries:       -lglpk
>   UMFPACK libraries:    
>   AMD libraries:        -lamd
>   CAMD libraries:       -lcamd
>   COLAMD libraries:     -lcolamd
>   CCOLAMD libraries:    -lccolamd
>   CHOLMOD libraries:    
>   CXSPARSE libraries:   -lcxsparse
>   ARPACK libraries:     
>   HDF5 libraries:       -lhdf5
>   CURL libraries:       -lcurl
>   REGEX libraries:      -lpcre
>   LIBS:                 -lreadline  -lncurses -ldl -lhdf5 -lz -lm 
>   Default pager:        less
>   gnuplot:              gnuplot
>
>   Do internal array bounds checking:  false
>   Build static libraries:             false
>   Build shared libraries:             true
>   Dynamic Linking:                    true (dlopen)
>   Include support for GNU readline:   true
>   64-bit array dims and indexing:     false
>
> configure: WARNING: UMFPACK not found.  This will result in some lack of
> functionality for sparse matrices.
> configure: WARNING: CHOLMOD not found. This will result in some lack of
> functionality for sparse matrices.
> configure:
>
> NOTE: libraries may be skipped if a library is not found OR
>       if the library on your system is missing required features.
>
> I sent a block of config.log file :
>
> ..........
> configure:15796: checking for cholmod_start in -lcholmod
> configure:15839: gcc -o conftest -g -O2   conftest.c -lcholmod -lcamd -lamd
> -lcolamd -lccolamd   -L/misc/sw1/foss/gfortran/
> linux/irun/bin/../lib/gcc/i386-pc-linux-gnu/4.3.0
> -L/misc/sw1/foss/gfortran/linux/irun/bin/../lib/gcc -L/misc/sw1/foss/gfor
> tran/linux/irun/bin/../lib/gcc/i386-pc-linux-gnu/4.3.0/../../.. -lhdf5 -lz
> -lgfortranbegin -lgfortran -lm -lmetis -lhdf5 -l z -lm  >&5
> /misc/sw1/foss/gfortran/linux/irun/bin/../lib/gcc/i386-pc-linux-gnu/4.3.0/..
> /../../libcholmod.so: undefined reference to `d gemv_'
> /misc/sw1/foss/gfortran/linux/irun/bin/../lib/gcc/i386-pc-linux-gnu/4.3.0/..
> /../../libcholmod.so: undefined reference to `z herk_'
> /misc/sw1/foss/gfortran/linux/irun/bin/../lib/gcc/i386-pc-linux-gnu/4.3.0/..
> /../../libcholmod.so: undefined reference to `z trsv_'
> /misc/sw1/foss/gfortran/linux/irun/bin/../lib/gcc/i386-pc-linux-gnu/4.3.0/..
> /../../libcholmod.so: undefined reference to `z potrf_'
> /misc/sw1/foss/gfortran/linux/irun/bin/../lib/gcc/i386-pc-linux-gnu/4.3.0/..
> /../../libcholmod.so: undefined reference to `d gemm_'
> /misc/sw1/foss/gfortran/linux/irun/bin/../lib/gcc/i386-pc-linux-gnu/4.3.0/..
> /../../libcholmod.so: undefined reference to `z gemv_'
> /misc/sw1/foss/gfortran/linux/irun/bin/../lib/gcc/i386-pc-linux-gnu/4.3.0/..
> /../../libcholmod.so: undefined reference to `d trsm_'
> /misc/sw1/foss/gfortran/linux/irun/bin/../lib/gcc/i386-pc-linux-gnu/4.3.0/..
> /../../libcholmod.so: undefined reference to `d potrf_'
> /misc/sw1/foss/gfortran/linux/irun/bin/../lib/gcc/i386-pc-linux-gnu/4.3.0/..
> /../../libcholmod.so: undefined reference to `d syrk_'
> /misc/sw1/foss/gfortran/linux/irun/bin/../lib/gcc/i386-pc-linux-gnu/4.3.0/..
> /../../libcholmod.so: undefined reference to `d trsv_'
> /misc/sw1/foss/gfortran/linux/irun/bin/../lib/gcc/i386-pc-linux-gnu/4.3.0/..
> /../../libcholmod.so: undefined reference to `z gemm_'
> /misc/sw1/foss/gfortran/linux/irun/bin/../lib/gcc/i386-pc-linux-gnu/4.3.0/..
> /../../libcholmod.so: undefined reference to `z trsm_'
>   

And cholmod was compiled with g77 3.2.3 or gfortran? Don't mix compilers
even for the dependent libraries..

D.



-- 
David Bateman                                address@hidden
Motorola Labs - Paris                        +33 1 69 35 48 04 (Ph) 
Parc Les Algorithmes, Commune de St Aubin    +33 6 72 01 06 33 (Mob) 
91193 Gif-Sur-Yvette FRANCE                  +33 1 69 35 77 01 (Fax) 

The information contained in this communication has been classified as: 

[x] General Business Information 
[ ] Motorola Internal Use Only 
[ ] Motorola Confidential Proprietary