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[bug#62297] [PATCH 1/5] gnu: Add r-affyilm.
From: |
Mădălin Ionel Patrașcu |
Subject: |
[bug#62297] [PATCH 1/5] gnu: Add r-affyilm. |
Date: |
Mon, 20 Mar 2023 17:00:01 +0100 |
* gnu/packages/bioconductor.scm (r-affyilm): New variable.
---
gnu/packages/bioconductor.scm | 26 ++++++++++++++++++++++++++
1 file changed, 26 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index e54c9ccf2b..48aa426574 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -2098,6 +2098,32 @@ (define-public r-affixcan
expression values are known.")
(license license:gpl3)))
+(define-public r-affyilm
+ (package
+ (name "r-affyilm")
+ (version "1.50.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "affyILM" version))
+ (sha256
+ (base32 "0i2hjaqjz06ym5kbw5da1h3cahc630mjwljsji1l2ks0gjcipll0"))))
+ (properties `((upstream-name . "affyILM")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-affxparser
+ r-affy
+ r-biobase
+ r-gcrma))
+ (home-page "https://bioconductor.org/packages/affyILM")
+ (synopsis "Linear model of background subtraction and the Langmuir
isotherm")
+ (description
+ "The affyILM package is a preprocessing tool which estimates gene
expression
+levels for Affymetrix Gene Chips. Input from physical chemistry is employed to
+first background subtract intensities before calculating concentrations on
behal
+of the Langmuir model.")
+ (license license:gpl3)))
+
(define-public r-affyrnadegradation
(package
(name "r-affyrnadegradation")
base-commit: 1f36534c7e8f2325bff4df5d37ecc811dc63fc38
--
2.39.2
- [bug#62297] [PATCH] gnu: Add r-affyilm, r-affyplm, r-affylmgui, r-annotationhubdata and r-tkrplot., address@hidden, 2023/03/20
- [bug#62297] [PATCH 1/5] gnu: Add r-affyilm.,
Mădălin Ionel Patrașcu <=
- [bug#62297] [PATCH 5/5] gnu: Add r-annotationhubdata., Mădălin Ionel Patrașcu, 2023/03/20
- [bug#62297] [PATCH 2/5] gnu: Add r-affyplm., Mădălin Ionel Patrașcu, 2023/03/20
- [bug#62297] [PATCH 3/5] gnu: Add r-tkrplot., Mădălin Ionel Patrașcu, 2023/03/20
- [bug#62297] [PATCH 4/5] gnu: Add r-affylmgui., Mădălin Ionel Patrașcu, 2023/03/20
- bug#62297: [PATCH 1/5] gnu: Add r-affyilm., Ricardo Wurmus, 2023/03/20