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[bug#43345] [PATCH 08/12] gnu: r-maldiquant: Move to (gnu packages cran)
From: |
zimoun |
Subject: |
[bug#43345] [PATCH 08/12] gnu: r-maldiquant: Move to (gnu packages cran). |
Date: |
Fri, 11 Sep 2020 20:08:45 +0200 |
* gnu/packages/bioinformatics.scm (r-maldiquant): Move from here ...
* gnu/packages/cran.scm (r-maldiquant): ... to here.
---
gnu/packages/bioinformatics.scm | 26 --------------------------
gnu/packages/cran.scm | 26 ++++++++++++++++++++++++++
2 files changed, 26 insertions(+), 26 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 40c6363859..fecb3c072d 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -9425,32 +9425,6 @@ for analyzing gene-level association tests in
meta-analyses for binary
trait.")
(license license:gpl3)))
-(define-public r-maldiquant
- (package
- (name "r-maldiquant")
- (version "1.19.3")
- (source
- (origin
- (method url-fetch)
- (uri (cran-uri "MALDIquant" version))
- (sha256
- (base32
- "0b7kdz3x4sdq413h1q09l1qhcvdnnwv6fqsqwllks1cd3xy34c57"))))
- (properties `((upstream-name . "MALDIquant")))
- (build-system r-build-system)
- (home-page "https://cran.r-project.org/web/packages/MALDIquant")
- (synopsis "Quantitative analysis of mass spectrometry data")
- (description
- "This package provides a complete analysis pipeline for matrix-assisted
-laser desorption/ionization-time-of-flight (MALDI-TOF) and other
-two-dimensional mass spectrometry data. In addition to commonly used plotting
-and processing methods it includes distinctive features, namely baseline
-subtraction methods such as morphological filters (TopHat) or the
-statistics-sensitive non-linear iterative peak-clipping algorithm (SNIP), peak
-alignment using warping functions, handling of replicated measurements as well
-as allowing spectra with different resolutions.")
- (license license:gpl3+)))
-
(define-public r-protgenerics
(package
(name "r-protgenerics")
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index 5d1e248cc4..a6c2518978 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -23776,3 +23776,29 @@ designs. Broman et al. (2018)
<doi:10.1534/genetics.118.301595>.")
data (variant call format, e.g. VCF or BCF) or meta-analysis results in R.")
;; Any version of the GPL is acceptable
(license (list license:gpl2+ license:gpl3+))))
+
+(define-public r-maldiquant
+ (package
+ (name "r-maldiquant")
+ (version "1.19.3")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "MALDIquant" version))
+ (sha256
+ (base32
+ "0b7kdz3x4sdq413h1q09l1qhcvdnnwv6fqsqwllks1cd3xy34c57"))))
+ (properties `((upstream-name . "MALDIquant")))
+ (build-system r-build-system)
+ (home-page "https://cran.r-project.org/web/packages/MALDIquant")
+ (synopsis "Quantitative analysis of mass spectrometry data")
+ (description
+ "This package provides a complete analysis pipeline for matrix-assisted
+laser desorption/ionization-time-of-flight (MALDI-TOF) and other
+two-dimensional mass spectrometry data. In addition to commonly used plotting
+and processing methods it includes distinctive features, namely baseline
+subtraction methods such as morphological filters (TopHat) or the
+statistics-sensitive non-linear iterative peak-clipping algorithm (SNIP), peak
+alignment using warping functions, handling of replicated measurements as well
+as allowing spectra with different resolutions.")
+ (license license:gpl3+)))
--
2.28.0
- [bug#43345] [PATCH 03/12] gnu: r-diffusionmap: Move to (gnu packages cran)., (continued)
- [bug#43345] [PATCH 03/12] gnu: r-diffusionmap: Move to (gnu packages cran)., zimoun, 2020/09/11
- [bug#43345] [PATCH 04/12] gnu: r-igraph: Move to (gnu packages cran)., zimoun, 2020/09/11
- [bug#43345] [PATCH 02/12] gnu: r-adaptivesparsity: Move to (gnu packages cran)., zimoun, 2020/09/11
- [bug#43345] [PATCH 05/12] gnu: r-qtl: Move to (gnu packages cran)., zimoun, 2020/09/11
- [bug#43345] [PATCH 06/12] gnu: r-qtl2: Move to (gnu packages cran)., zimoun, 2020/09/11
- [bug#43345] [PATCH 09/12] gnu: r-seurat: Move to (gnu packages cran)., zimoun, 2020/09/11
- [bug#43345] [PATCH 07/12] gnu: r-seqminer: Move to (gnu packages cran)., zimoun, 2020/09/11
- [bug#43345] [PATCH 12/12] gnu: r-absfiltergsea: Move to (gnu packages cran)., zimoun, 2020/09/11
- [bug#43345] [PATCH 10/12] gnu: r-phangorn: Move to (gnu packages cran)., zimoun, 2020/09/11
- [bug#43345] [PATCH 11/12] gnu: r-diversitree: Move to (gnu packages cran)., zimoun, 2020/09/11
- [bug#43345] [PATCH 08/12] gnu: r-maldiquant: Move to (gnu packages cran).,
zimoun <=
- bug#43345: [PATCH 00/12] Move some CRAN packages to (gnu packages cran)., Ricardo Wurmus, 2020/09/11