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02/03: gnu: Add r-databaselinke-r.
From: |
guix-commits |
Subject: |
02/03: gnu: Add r-databaselinke-r. |
Date: |
Mon, 1 Jan 2024 13:25:13 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit 679560ffca1217ffd7d024266f0ae571b1fc940d
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Mon Jan 1 19:21:59 2024 +0100
gnu: Add r-databaselinke-r.
* gnu/packages/bioinformatics.scm (r-databaselinke-r): New variable.
Change-Id: I0cfcb5b6810b7afebbb9ccb02aafcce05507536c
---
gnu/packages/bioinformatics.scm | 28 ++++++++++++++++++++++++++++
1 file changed, 28 insertions(+)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index de37d19264..2cfbd4eda6 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -17996,6 +17996,34 @@ The tool enables the de novo search for new structural
elements and
facilitates comparative analysis of known RNA families.")
(license license:bsd-3)))
+(define-public r-databaselinke-r
+ (let ((commit "cf3d6cc3d36f2e1c9a557390232e9a8ed5abb7fd")
+ (revision "1"))
+ (package
+ (name "r-databaselinke-r")
+ (version (git-version "1.7.0" revision commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/vertesy/DatabaseLinke.R")
+ (commit commit)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "0hk76sb3w1v8a7c1knpc572ypsbgqlrv0p49c9y55a0dr12n16s1"))))
+ (properties `((upstream-name . "DatabaseLinke.R")))
+ (build-system r-build-system)
+ (propagated-inputs (list r-readwriter))
+ (home-page "https://github.com/vertesy/DatabaseLinke.R")
+ (synopsis
+ "Parse links to databases from your list of gene symbols")
+ (description
+ "This package provides a set of functions to parse and open (search
+query) links to genomics related and other websites for R. Useful when you
+want to explore e.g.: the function of a set of differentially expressed
+genes.")
+ (license license:gpl3))))
+
(define-public r-seurat-utils
(let ((commit "0b6f5b548a49148cfbeaa654e8a618c0a020afa5")
(revision "1"))