05/16: gnu: mafft: Add bash-minimal to inputs.

[guix-commits]

apteryx pushed a commit to branch core-updates
in repository guix.

commit 3f9dfe215d34210b5e73be7cc03735cf4fb907af
Author: Maxim Cournoyer <maxim.cournoyer@gmail.com>
AuthorDate: Fri Oct 20 01:05:23 2023 -0400

    gnu: mafft: Add bash-minimal to inputs.
    
    * gnu/packages/bioinformatics.scm (mafft): Delete trailing #t.
    [inputs]: Add bash-minimal.
    
    Change-Id: Id30d22dc37ee57591f17dc116de81500b09adf3c
---
 gnu/packages/bioinformatics.scm | 8 +++-----
 1 file changed, 3 insertions(+), 5 deletions(-)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index c807ec1bb8..4f3a25c78c 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -7213,8 +7213,7 @@ selection, etc.).")
                (("^rm -f mafft-distance mafft-distance.exe") ")#")
                ;; do not install MAN pages in libexec folder
                (("^\t\\$\\(INSTALL\\) -m 644 \\$\\(MANPAGES\\) \
-\\$\\(DESTDIR\\)\\$\\(LIBDIR\\)") "#"))
-             #t))
+\\$\\(DESTDIR\\)\\$\\(LIBDIR\\)") "#"))))
          (add-after 'enter-dir 'patch-paths
            (lambda* (#:key inputs #:allow-other-keys)
              (substitute* '("pairash.c"
@@ -7222,8 +7221,7 @@ selection, etc.).")
                (("perl") (which "perl"))
                (("([\"`| ])awk" _ prefix)
                 (string-append prefix (which "awk")))
-               (("grep") (which "grep")))
-             #t))
+               (("grep") (which "grep")))))
          (delete 'configure)
          (add-after 'install 'wrap-programs
            (lambda* (#:key inputs outputs #:allow-other-keys)
@@ -7236,7 +7234,7 @@ selection, etc.).")
                              `("PATH" ":" prefix (,path))))
                          (find-files bin))))))))
     (inputs
-     (list perl ruby gawk grep coreutils))
+     (list bash-minimal perl ruby gawk grep coreutils))
     (home-page "https://mafft.cbrc.jp/alignment/software/";)
     (synopsis "Multiple sequence alignment program")
     (description