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branch master updated: gnu: Add python-mudata.
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guix-commits |
Subject: |
branch master updated: gnu: Add python-mudata. |
Date: |
Fri, 09 Jun 2023 11:09:59 -0400 |
This is an automated email from the git hooks/post-receive script.
rekado pushed a commit to branch master
in repository guix.
The following commit(s) were added to refs/heads/master by this push:
new 74443c30f3 gnu: Add python-mudata.
74443c30f3 is described below
commit 74443c30f3e20655a046c0d3ea236822ef130968
Author: Navid Afkhami <navid.afkhami@mdc-berlin.de>
AuthorDate: Fri Jun 9 16:56:34 2023 +0200
gnu: Add python-mudata.
* gnu/packages/bioinformatics.scm (python-mudata): New variable.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
---
gnu/packages/bioinformatics.scm | 26 ++++++++++++++++++++++++++
1 file changed, 26 insertions(+)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 38c5195146..9e356cba5d 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -3357,6 +3357,32 @@ It provides convenience functions to load and visualize
factor models trained
with MOFA+ in Python.")
(license license:expat))))
+(define-public python-mudata
+ (package
+ (name "python-mudata")
+ (version "0.2.3")
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/scverse/mudata")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "02h0k1q57589r0hdv8nwg1vk7g2ljvn5g66c47fy5gdilbm3gjws"))))
+ (build-system pyproject-build-system)
+ (propagated-inputs
+ (list python-anndata python-h5py python-pandas))
+ (native-inputs
+ (list python-flit-core python-numpy python-pytest python-zarr))
+ (home-page "https://github.com/scverse/mudata")
+ (synopsis "Python package for multi-omics data analysis")
+ (description
+ "Mudata is a Python package for multi-omics data analysis.
+It is designed to provide functionality to load, process, and store multimodal
+omics data.")
+ (license license:bsd-3)))
+
(define-public python-pyega3
(package
(name "python-pyega3")
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