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01/02: gnu: r-doubletcollection: Add missing inputs.
From: |
guix-commits |
Subject: |
01/02: gnu: r-doubletcollection: Add missing inputs. |
Date: |
Fri, 3 Mar 2023 17:50:04 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit 8f084b2c7c68015fb10542f804d7016c872c3c3d
Author: Navid Afkhami <navid.afkhami@mdc-berlin.de>
AuthorDate: Fri Feb 17 16:02:52 2023 +0100
gnu: r-doubletcollection: Add missing inputs.
If these Python packages are not available at runtime the package tries to
install them automatically via Conda.
* gnu/packages/bioinformatics.scm (r-doubletcollection)[propagated-inputs]:
Add python, python-scrublet, and python-doubletdetection.
---
gnu/packages/bioinformatics.scm | 5 ++++-
1 file changed, 4 insertions(+), 1 deletion(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 85b81b2c81..0c1d6d38c7 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -8657,7 +8657,10 @@ Pore-C concatemers.")
r-seurat
r-singlecellexperiment
r-slingshot
- r-summarizedexperiment))
+ r-summarizedexperiment
+ python
+ python-scrublet
+ python-doubletdetection))
(home-page "https://github.com/xnnba1984/DoubletCollection")
(synopsis "Tool for finding doublets in scRNA-seq data")
(description