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01/02: gnu: r-doubletcollection: Add missing inputs.


From: guix-commits
Subject: 01/02: gnu: r-doubletcollection: Add missing inputs.
Date: Fri, 3 Mar 2023 17:50:04 -0500 (EST)

rekado pushed a commit to branch master
in repository guix.

commit 8f084b2c7c68015fb10542f804d7016c872c3c3d
Author: Navid Afkhami <navid.afkhami@mdc-berlin.de>
AuthorDate: Fri Feb 17 16:02:52 2023 +0100

    gnu: r-doubletcollection: Add missing inputs.
    
    If these Python packages are not available at runtime the package tries to
    install them automatically via Conda.
    
    * gnu/packages/bioinformatics.scm (r-doubletcollection)[propagated-inputs]:
    Add python, python-scrublet, and python-doubletdetection.
---
 gnu/packages/bioinformatics.scm | 5 ++++-
 1 file changed, 4 insertions(+), 1 deletion(-)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 85b81b2c81..0c1d6d38c7 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -8657,7 +8657,10 @@ Pore-C concatemers.")
                                r-seurat
                                r-singlecellexperiment
                                r-slingshot
-                               r-summarizedexperiment))
+                               r-summarizedexperiment
+                               python
+                               python-scrublet
+                               python-doubletdetection))
       (home-page "https://github.com/xnnba1984/DoubletCollection";)
       (synopsis "Tool for finding doublets in scRNA-seq data")
       (description



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