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30/38: gnu: r-opencyto: Update to 2.10.1.
From: |
guix-commits |
Subject: |
30/38: gnu: r-opencyto: Update to 2.10.1. |
Date: |
Tue, 20 Dec 2022 04:58:23 -0500 (EST) |
rekado pushed a commit to branch wip-bioconductor
in repository guix.
commit 629c379977d22395eb4a8f35a4988d8c7d9b4564
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Mon Dec 19 23:00:02 2022 +0100
gnu: r-opencyto: Update to 2.10.1.
* gnu/packages/bioconductor.scm (r-opencyto): Update to 2.10.1.
[propagated-inputs]: Remove r-clue, r-flowstats, r-gtools, r-ks, r-lattice,
r-mass,
r-plyr, r-r-utils, r-rcpp, and r-rrcov; add r-bh and r-cpp11.
---
gnu/packages/bioconductor.scm | 20 ++++++--------------
1 file changed, 6 insertions(+), 14 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 761a878cdb..90ae32877a 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -13721,38 +13721,30 @@ package.")
(define-public r-opencyto
(package
(name "r-opencyto")
- (version "2.10.0")
+ (version "2.10.1")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "openCyto" version))
(sha256
(base32
- "1pkpm98fs17zqdvyymd58sl4cib7gdi7drvdkagilrafjcrpq31m"))))
+ "16wsa9dhnz8gz1siyhfxvnbfg142g7fmhxiqxr7n69qpq9w8yhr0"))))
(properties `((upstream-name . "openCyto")))
(build-system r-build-system)
(propagated-inputs
- (list r-biobase
+ (list r-bh
+ r-biobase
r-biocgenerics
- r-clue
+ r-cpp11
r-data-table
r-flowclust
r-flowcore
- r-flowstats
r-flowviz
r-flowworkspace
r-graph
- r-gtools
- r-ks
- r-lattice
- r-mass
r-ncdfflow
- r-plyr
- r-r-utils
r-rbgl
- r-rcolorbrewer
- r-rcpp
- r-rrcov))
+ r-rcolorbrewer))
(native-inputs
(list r-knitr))
(home-page "https://bioconductor.org/packages/openCyto")
- 12/38: gnu: r-genomicranges: Update to 1.50.2., (continued)
- 12/38: gnu: r-genomicranges: Update to 1.50.2., guix-commits, 2022/12/20
- 21/38: gnu: r-lpsymphony: Update to 1.26.2., guix-commits, 2022/12/20
- 18/38: gnu: r-diffbind: Update to 3.8.3., guix-commits, 2022/12/20
- 22/38: gnu: r-linnorm: Update to 2.22.1., guix-commits, 2022/12/20
- 26/38: gnu: r-aucell: Update to 1.20.2., guix-commits, 2022/12/20
- 24/38: gnu: r-enrichplot: Update to 1.18.3., guix-commits, 2022/12/20
- 33/38: gnu: r-preprocesscore: Update to 1.60.1., guix-commits, 2022/12/20
- 27/38: gnu: r-iclusterplus: Update to 1.34.2., guix-commits, 2022/12/20
- 37/38: gnu: r-scran: Update to 1.26.1., guix-commits, 2022/12/20
- 34/38: gnu: r-s4vectors: Update to 0.36.1., guix-commits, 2022/12/20
- 30/38: gnu: r-opencyto: Update to 2.10.1.,
guix-commits <=
- 07/38: gnu: r-deseq2: Update to 1.38.2., guix-commits, 2022/12/20
- 14/38: gnu: r-lfa: Update to 1.28.1., guix-commits, 2022/12/20
- 15/38: gnu: r-scmap: Update to 1.20.1., guix-commits, 2022/12/20
- 23/38: gnu: r-sigpathway: Update to 1.66.1., guix-commits, 2022/12/20
- 28/38: gnu: r-rsubread: Update to 2.12.2., guix-commits, 2022/12/20
- 36/38: gnu: r-scuttle: Update to 1.8.3., guix-commits, 2022/12/20
- 03/38: gnu: r-bandits: Update to 1.14.1., guix-commits, 2022/12/20
- 20/38: gnu: r-dnacopy: Update to 1.72.2., guix-commits, 2022/12/20
- 29/38: gnu: r-ggcyto: Update to 1.26.4., guix-commits, 2022/12/20
- 32/38: gnu: r-biocviews: Update to 1.66.1., guix-commits, 2022/12/20