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371/449: DRAFT gnu: r-rgreat: Update to 2.0.1.
From: |
guix-commits |
Subject: |
371/449: DRAFT gnu: r-rgreat: Update to 2.0.1. |
Date: |
Tue, 22 Nov 2022 15:47:58 -0500 (EST) |
rekado pushed a commit to branch wip-bioconductor
in repository guix.
commit 8b41fa9288d4b91d13b67baf44af7f3614d8c6fe
Author: zimoun <zimon.toutoune@gmail.com>
AuthorDate: Thu Nov 17 03:50:29 2022 +0100
DRAFT gnu: r-rgreat: Update to 2.0.1.
* gnu/packages/bioconductor.scm (r-rgreat): Update to 2.0.1.
[propagated-inputs]: Add r-annotationdbi, r-circlize, r-digest,
r-doparallel, r-dt,
r-foreach, r-genomeinfodb, r-genomicfeatures, r-globaloptions,
r-go-db, r-org-hs-eg-db, r-progress, r-rcolorbrewer, r-rcpp,
r-s4vectors, r-shiny, r-txdb-hsapiens-ucsc-hg19-knowngene, and
r-txdb-hsapiens-ucsc-hg38-knowngene.
---
gnu/packages/bioconductor.scm | 28 +++++++++++++++++++++++++---
1 file changed, 25 insertions(+), 3 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index e34ba7073c..04ef4c8836 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -15321,18 +15321,40 @@ dimensional mass cytometry data.")
(define-public r-rgreat
(package
(name "r-rgreat")
- (version "1.28.0")
+ (version "2.0.1")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "rGREAT" version))
(sha256
(base32
- "0px72r8mjimf5mxfwb9qz46kqpgjw5gaqq41hy0212ymjd8whaky"))))
+ "1s1xx15ilamcyd8f7cnsgdc3r3izhx9wxmb8amamrmr9bzijjvhi"))))
(properties `((upstream-name . "rGREAT")))
(build-system r-build-system)
(propagated-inputs
- (list r-genomicranges r-getoptlong r-iranges r-rcurl r-rjson))
+ (list r-annotationdbi
+ r-circlize
+ r-digest
+ r-doparallel
+ r-dt
+ r-foreach
+ r-genomeinfodb
+ r-genomicfeatures
+ r-genomicranges
+ r-getoptlong
+ r-globaloptions
+ r-go-db
+ r-iranges
+ r-org-hs-eg-db
+ r-progress
+ r-rcolorbrewer
+ r-rcurl
+ r-rcpp
+ r-rjson
+ r-s4vectors
+ r-shiny
+ r-txdb-hsapiens-ucsc-hg19-knowngene
+ r-txdb-hsapiens-ucsc-hg38-knowngene))
(native-inputs (list r-knitr))
(home-page "https://github.com/jokergoo/rGREAT")
(synopsis "Client for GREAT analysis")
- 332/449: gnu: r-variancepartition: Update to 1.28.0., (continued)
- 332/449: gnu: r-variancepartition: Update to 1.28.0., guix-commits, 2022/11/22
- 335/449: gnu: r-universalmotif: Update to 1.16.0., guix-commits, 2022/11/22
- 337/449: gnu: r-acgh: Update to 1.76.0., guix-commits, 2022/11/22
- 339/449: gnu: r-acde: Update to 1.28.0., guix-commits, 2022/11/22
- 346/449: gnu: r-hypergraph: Update to 1.70.0., guix-commits, 2022/11/22
- 345/449: gnu: r-rsbml: Update to 2.56.0., guix-commits, 2022/11/22
- 352/449: gnu: r-bioassayr: Update to 1.36.0., guix-commits, 2022/11/22
- 358/449: gnu: r-biocgraph: Update to 1.60.0., guix-commits, 2022/11/22
- 359/449: gnu: r-biocstyle: Update to 2.26.0., guix-commits, 2022/11/22
- 363/449: gnu: r-multiassayexperiment: Update to 1.24.0., guix-commits, 2022/11/22
- 371/449: DRAFT gnu: r-rgreat: Update to 2.0.1.,
guix-commits <=
- 378/449: gnu: r-fithic: Update to 1.24.0., guix-commits, 2022/11/22
- 380/449: gnu: r-hdf5array: Update to 1.26.0., guix-commits, 2022/11/22
- 391/449: gnu: r-scater: Update to 1.26.1., guix-commits, 2022/11/22
- 394/449: gnu: r-delayedmatrixstats: Update to 1.20.0., guix-commits, 2022/11/22
- 399/449: gnu: r-msmstests: Update to 1.36.0., guix-commits, 2022/11/22
- 407/449: gnu: r-pathview: Update to 1.38.0., guix-commits, 2022/11/22
- 413/449: gnu: r-beclear: Update to 2.14.0., guix-commits, 2022/11/22
- 416/449: gnu: r-biobtreer: Update to 1.10.0., guix-commits, 2022/11/22
- 422/449: gnu: r-biocthis: Update to 1.8.1., guix-commits, 2022/11/22
- 423/449: gnu: r-biocdockermanager: Update to 1.10.0., guix-commits, 2022/11/22