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02/06: gnu: htslib: Add bzip2 and xz to inputs.
From: |
guix-commits |
Subject: |
02/06: gnu: htslib: Add bzip2 and xz to inputs. |
Date: |
Thu, 31 Mar 2022 09:31:55 -0400 (EDT) |
efraim pushed a commit to branch master
in repository guix.
commit 7d331dd20302ca1d7df4fc67bfcedde9d897cc97
Author: Arun Isaac <arunisaac@systemreboot.net>
AuthorDate: Thu Mar 31 12:58:46 2022 +0530
gnu: htslib: Add bzip2 and xz to inputs.
htslib links to libbz2 from bzip2 and liblzma from xz. Therefore, bzip2 and
xz
should be listed in inputs even though they are already present implicitly
in
native-inputs. Else, cross-compilation will fail.
* gnu/packages/bioinformatics.scm (htslib)[inputs]: Add bzip2 and xz.
Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
---
gnu/packages/bioinformatics.scm | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 693158798a..9c7ef41cc1 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -8,7 +8,7 @@
;;; Copyright © 2016, 2020, 2022 Marius Bakke <marius@gnu.org>
;;; Copyright © 2016, 2018 Raoul Bonnal <ilpuccio.febo@gmail.com>
;;; Copyright © 2017, 2018 Tobias Geerinckx-Rice <me@tobias.gr>
-;;; Copyright © 2017, 2021 Arun Isaac <arunisaac@systemreboot.net>
+;;; Copyright © 2017, 2021, 2022 Arun Isaac <arunisaac@systemreboot.net>
;;; Copyright © 2018 Joshua Sierles, Nextjournal <joshua@nextjournal.com>
;;; Copyright © 2018 Gábor Boskovits <boskovits@gmail.com>
;;; Copyright © 2018, 2019, 2020, 2021 Mădălin Ionel Patrașcu
<madalinionel.patrascu@mdc-berlin.de>
@@ -4788,7 +4788,7 @@ performance.")
"--enable-libcurl"
"--enable-s3")))
(inputs
- (list curl openssl))
+ (list bzip2 curl openssl xz))
;; This is referred to in the pkg-config file as a required library.
(propagated-inputs
(list zlib))
- branch master updated (a69a44bf59 -> 8f3dc994bb), guix-commits, 2022/03/31
- 02/06: gnu: htslib: Add bzip2 and xz to inputs.,
guix-commits <=
- 01/06: gnu: gsl: Force bootstrap when cross-compiling to riscv64-linux., guix-commits, 2022/03/31
- 04/06: gnu: atomic-queue: Do not look for boost when cross-compiling., guix-commits, 2022/03/31
- 03/06: gnu: atomic-queue: Run tests correctly., guix-commits, 2022/03/31
- 05/06: gnu: Add wfmash., guix-commits, 2022/03/31
- 06/06: gnu: wfmash: Enable test suite., guix-commits, 2022/03/31