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branch core-updates-frozen updated (6d4f260 -> 114eb98)
From: |
guix-commits |
Subject: |
branch core-updates-frozen updated (6d4f260 -> 114eb98) |
Date: |
Fri, 3 Dec 2021 18:33:43 -0500 (EST) |
rekado pushed a change to branch core-updates-frozen
in repository guix.
from 6d4f260 gnu: bamutils: Update to 1.0.14.
new a5663a7 gnu: qtltools: Replace references to %build-inputs.
new 0e09065 gnu: bedtools: Remove reference to %outputs.
new dd19c8d gnu: bless: Remove trailing #T from snippet and build phases.
new f5c38ee gnu: bless: Remove reference to %build-inputs.
new a47a90b gnu: bowtie: Remove reference to %outputs.
new c40852a gnu: bowtie1: Replace reference to %outputs.
new fd607a9 gnu: cd-hit: Replace reference to %outputs.
new 3601fcb gnu: libbigwig: Replace reference to %outputs.
new 4f03151 gnu: delly: Replace reference to %outputs.
new 62e0641 gnu: fxtract: Replace reference to %outputs.
new a3b00a2 gnu: java-htsjdk: Replace reference to %outputs.
new 64aafe4 gnu: java-picard: Replace reference to %build-inputs.
new 7c2ee27 gnu: fastp: Replace reference to %outputs.
new 5cb2920 gnu: jellyfish: Replace reference to %outputs.
new 630671d gnu: mafft: Replace references to %build-inputs and %outputs.
new 31409a4 gnu: mafft: Remove trailing #T.
new a6b6084 gnu: mash: Simplify snippet.
new 22d9097 gnu: mash: Move htslib and capnproto to regular inputs.
new 114eb98 gnu: mash: Replace references to %build-inputs.
The 19 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "add" were already present in the repository and have only
been added to this reference.
Summary of changes:
gnu/packages/bioinformatics.scm | 159 +++++++++++++++++++---------------------
1 file changed, 74 insertions(+), 85 deletions(-)
- branch core-updates-frozen updated (6d4f260 -> 114eb98),
guix-commits <=
- 01/19: gnu: qtltools: Replace references to %build-inputs., guix-commits, 2021/12/03
- 02/19: gnu: bedtools: Remove reference to %outputs., guix-commits, 2021/12/03
- 03/19: gnu: bless: Remove trailing #T from snippet and build phases., guix-commits, 2021/12/03
- 04/19: gnu: bless: Remove reference to %build-inputs., guix-commits, 2021/12/03
- 05/19: gnu: bowtie: Remove reference to %outputs., guix-commits, 2021/12/03
- 06/19: gnu: bowtie1: Replace reference to %outputs., guix-commits, 2021/12/03
- 07/19: gnu: cd-hit: Replace reference to %outputs., guix-commits, 2021/12/03
- 10/19: gnu: fxtract: Replace reference to %outputs., guix-commits, 2021/12/03
- 12/19: gnu: java-picard: Replace reference to %build-inputs., guix-commits, 2021/12/03
- 13/19: gnu: fastp: Replace reference to %outputs., guix-commits, 2021/12/03