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branch core-updates-frozen updated (e55547b -> cdb0e04)


From: guix-commits
Subject: branch core-updates-frozen updated (e55547b -> cdb0e04)
Date: Wed, 17 Nov 2021 18:01:18 -0500 (EST)

civodul pushed a change to branch core-updates-frozen
in repository guix.

    from e55547b  gnu: pdfpc: Replace webkitgtk with webkitgtk-with-libsoup2.
     add 7de409c  gnu: ffmpeg: Update to 4.4.1.
     add aa58fb5  gnu: ffmpeg-3.4: Update to 3.4.9.
     add e53e0d0  gnu: ffmpeg-2.8: Update to 2.8.18.
     add e6a9e7d  gnu: stagit: Update to 0.9.6.
     add 56dcaff  gnu: stagit: Prepare for cross-compiling.
     add 27b0e71  gnu: python-pytest-astropy: Adjust inputs.
     add a168679  gnu: python-pyerfa: Adjust inputs.
     add 9371cf2  gnu: Add python-astropy.
     add 6ec0c6c  gnu: Add cl-alloy.
     add 07a6858  gnu: Add cl-kaputt.
     add 0502be5  gnu: cl-fiasco: Update to 0.0.1-2.bb47d2f.
     add f52719d  gnu: Add python-giturlparse.
     add a7c0698  gnu: linux-libre 5.14: Update to 5.14.17.
     add 66250ea  gnu: linux-libre 5.10: Update to 5.10.78.
     add 6b2d9fa  gnu: linux-libre 5.4: Update to 5.4.158.
     add 2d2f50b  gnu: linux-libre 4.19: Update to 4.19.216.
     add b6e1ba6  gnu: libavif: Restrict dependency on rav1e to x86_64.
     add 782ec05  gnu: python-hypercorn: Remove "python-" prefix from name.
     add 556a3ac  gnu: hypercorn: Update to 0.11.2.
     add a6dc9f7  gnu: hypercorn: Honor #:tests? in 'check' phase.
     add b43ad84  gnu: Add python-filetype.
     add 3a4107b  gnu: Add python-immutabledict.
     add 2181133  gnu: Add python-emoji.
     add 71dc19d  gnu: Add python-cachelib.
     add 590074a  gnu: python-cachelib: Update to 0.4.1.
     add 9b14b26  gnu: packages: Remove last year's deprecations.
     add f40526c  gnu: qjackctl: Update to 0.9.5.
     add c3e70aa  gnu: patchage: Update to 1.0.4.
     add 41cb043  gnu: patchage: Fix home page URL.
     add 2a40b19  gnu: patchage: Build with Python 3.
     add d71bd56  gnu: python-jplephem: Update to 2.16.
     add 8fc7803  gnu: minixml: Update to 3.3.
     add 7b89818  gnu: plocate: Update to 1.1.13.
     add f5ab35f  gnu: nbd: Update to 3.22.
     add a2d0bee  gnu: mbuffer: Update to 20211018.
     add 704c23c  gnu: libx86emu: Update to 3.4.
     add 17263b3  gnu: libseccomp: Update to 2.5.3.
     add 1b95a7b  gnu: debootstrap: Update to 1.0.126.
     add 4d03acb  gnu: debianutils: Update to 5.5-1.
     add c071984  gnu: emacs-vertico: Update to 0.15.
     add 9934ea4  gnu: mozjs-78: Update to 78.6.1.
     add 7c5db47  gnu: emacs-doom-modeline: Update to 3.2.1.
     add e5667ed  doc: Fix typo.
     add f8ac788  gnu: sdlpop: Fix executable location.
     add 510a591  gnu: libaom: Update to 3.2.0.
     add 9e48ac2  gnu: dunst: Update to 1.7.1.
     add 721f3ed  gnu: emacs-corfu: Update to 0.14.
     add 42eb5b6  gnu: samba: Update to 4.13.14.
     add a7e7385  gnu: libhx: Update to 4.2.
     add 3b7619b  gnu: di: Update to 4.51.
     add 7a4a77e  gnu: certbot, python-acme: Update to 1.18.0.
     add 4e45e89  gnu: rust-regex-1: Fix building.
     add fcc4d62  gnu: fcitx5: Update to 5.0.10.
     add d16650c  gnu: fcitx5-gtk: Update to 5.0.9.
     add dcf48a1  gnu: fcitx5-qt: Update to 5.0.7.
     add 159ee05  gnu: fcitx5-configtool: Update to 5.0.8.
     add 6492e6c  gnu: emacs-minions: Update to 0.3.7.
     add e469911  gnu: emacs-posframe: Update to 1.1.1.
     add e765520  gnu: Add emacs-plz.
     add 4c6f945  gnu: rust-speculate-0.1: Fix build.
     add 140b486  gnu: Add emacs-ement.
     add ee7c96a  gnu: rust-os-pipe: Update to 0.9.2.
     add 43618fe  gnu: rust-duct-0.13: Update to 0.13.5.
     add f7019cc  gnu: Add BLAKE3 Rust implementation.
     add 650dcc1  gnu: Add BLAKE3 command line tool.
     add b20cd80  import: pypi: Allow imports of a specific version.
     add 450e1dd  import: cran: Allow imports of a specific version.
     add 04d9295  import: print: Properly render packages with origins as 
inputs.
     add b3240ae  import: print: Correctly handle URI lists.
     add b2ed40c  import: print: Handle patches that are origins.
     add 3756ce3  import: print: Replace packages and origins in 'arguments'.
     add ac2bd4a  gnu: python-poetry-core: Update to 1.0.7.
     add 800afd2  gnu: poetry: Update to 1.1.11.
     add 5592058  gnu: Add python-wand.
     add 3d1c984  gnu: bitcoin-core-0.20: Update to 0.20.2.
     add f20e0f6  gnu: Add rust-safe-arch-0.5.
     add 3cd3703  gnu: Add rust-rkyv-derive-0.6.
     add f2cbee9  gnu: Add rust-seahash-4.
     add 40cf0dd  gnu: Add rust-triple-accel-0.4.
     add 1a3f387  gnu: Add rust-wide-0.6.
     add 723ff70  gnu: Add rust-approx-0.5.
     add 97ead3f  gnu: Add rust-simba-0.5.
     add 8ef352a  gnu: Add rust-bytecheck-derive-0.5.
     add 574647b  gnu: Add rust-ptr-meta-derive-0.1.
     add 11fb842  gnu: Add rust-ptr-meta-0.1.
     add 5b6a550  gnu: Add rust-bytecheck-0.5.
     add d487e12  gnu: Add rust-rkyv-0.6.
     add 87a1ca3  gnu: Add rust-rand-xoshiro-0.6.
     add bb8a0af  gnu: Add rust-serde-big-array-0.3.
     add e326a4f  gnu: Add rust-float-ord-0.3.
     add de772f8  gnu: Add rust-easy-cast-0.4.
     add 8831904  gnu: Add rust-average-0.13.
     add 458b1c2  gnu: Add rust-rand-pcg-0.3.
     add 8be3343  gnu: Add rust-assert-0.7.
     add 935d535  gnu: Add rust-random-0.12.
     add 0cd5039  gnu: Add rust-special-0.8.
     add c7ffcde  gnu: Add rust-rand-distr-0.4.
     add d29fa44  gnu: Add rust-bytemuck-1.5.
     add e182b69  gnu: rust-heck-0.3: Update to 0.3.2.
     add 2f06d1b  gnu: Add rust-rand-isaac-0.3.
     add bcbd0fc  gnu: Add rust-simba-0.4.
     add e800931  gnu: Add rust-spirv-types-0.4.
     add 3cd8964  gnu: Add rust-spirv-std-macros-0.4.
     add fb4340e  gnu: Add rust-spirv-std-0.4.
     add 8f88630  gnu: Add rust-matrixcompare-core-0.1.
     add 9886c01  gnu: Add rust-matrixcompare-0.2.
     add c285cb7  gnu: Add rust-glam-0.13.
     add 94abd4b  gnu: Add rust-triple-accel-0.3.
     add 6a4b4d3  gnu: Add rust-bio-types-0.12.
     add 4ef9ef0  gnu: Add rust-feature-probe-0.1.
     add 0885604  gnu: Add rust-bv-0.11.
     add 9a6b269  gnu: Add rust-multimap-0.8.
     add e7d7434  gnu: Add rust-semver-0.1.
     add 3f6fd2d  gnu: Add rust-rustc-version-0.1.
     add 0c90fd7  gnu: Add rust-newtype-derive-0.1.
     add 15b5102  gnu: Add rust-getset-0.0.9.
     add 0be2f29  gnu: Add rust-matrixcompare-mock-0.1.
     add 6e73186  gnu: Add rust-matrixcompare-0.3.
     add 4089e0d  gnu: Add rust-array-macro-1.
     add d75a5c5  gnu: Add rust-glam-0.14.
     add dba9c7d  gnu: Add rust-statrs-0.13.
     add 7c4a624  gnu: Add rust-enum-map-derive-0.4.
     add 5f42641  gnu: Add rust-enum-map-0.6.
     add 02bf5e1  gnu: Add rust-nalgebra-0.26.
     add 7af81d8  gnu: Add rust-nalgebra-macros-0.1.
     add d44ae04  gnu: Add rust-statrs-0.14.
     add 15abac1  gnu: Add rust-glam-0.15.
     add 43260f6  gnu: Add rust-glam-0.16.
     add 60d2566  gnu: Add rust-glam-0.17.
     add 067de02  gnu: Add rust-bio-0.33.
     add c576b3b  gnu: Add rust-parasail-sys-0.2.
     add 86fa7a7  gnu: Add rust-parasailors-0.3.
     add 01da92e  gnu: Add rust-fastq-0.6.
     add 7d00ffc  gnu: Add rust-snafu-derive-0.6.
     add 0e5127c  gnu: Add rust-statrs-0.12.
     add 33802ba  gnu: Add rust-snafu-0.6.
     add e624622  gnu: Add rust-bio-0.32.
     add b905d7c  gnu: Add rust-seq-io-0.3.
     add 4052310  gnu: Add biosoup.
     add b8c9f06  gnu: Add bioparser.
     add 6be47c5  gnu: Add circtools.
     add c4e5fab  gnu: ciri-long: Fix reference to ccs.
     add a0fc9e3  gnu: ciri-long: Move Cython to native inputs.
     add 893a31e  gnu: rust-rustc-version-0.3: Update home page.
     add 33a80e1  gnu: tar: Replace with 1.34 [fixes CVE-2021-20193].
     add 6e67c70  gnu: cuirass: Update to 1.1.0-5.ea09658.
     add 3975450  gnu: genimage: Update to 14.
     add 096a2bf  image: Support generating GPT images via 
`partition-table-type`.
     add fb3df20  build: bootloader: Add GPT support.
     add da73727  gnu: Add texlive-latex-bussproofs.
     add 0c21ec1  import: utils: Add more licenses and extend their detection.
     add f634a0b  services: Add qemu-guest-agent service.
     add 18cf347  gnu: Add emacs-flymake-flycheck.
     add 729936c  gnu: Add python-sgmllib3k.
     add d402340  gnu: python-feedparser: Add input
     add 3374894  gnu: Add rss2email.
     add dc05fea  gnu: diffoscope: Update to 192.
     add f116b47  gnu: Add Breezy.
     add 193d7b5  guix: packages: Clarify that list is a list of <license> 
records.
     add e9e1627  gnu: duplicity: Update to 0.8.21.
     add 114005b  tests: Adjust tests/egg.scm to latest API changes.
     add c899566  gnu: spdlog: Update to 1.9.2.
     add 357ecb7  gnu: waybar: Update to 0.9.8.
     add 459d7cf  gnu: fmt: Update to 8.0.1.
     add 01eb317  gnu: bear: Update to 3.0.16.
     add 8e5df0c  gnu: Add axc.
     add 2a05676  gnu: Add libomemo.
     add 704bd69  gnu: Add purple-lurch.
     add d0313cd  gnu: Add renameutils.
     add 2bb0d8b  gnu: renameutils: Fix license and tweak.
     add 7f7f739  gnu: mu: Update to 1.6.10.
     add efa6a40  gnu: linux-libre: Update to 5.14.18.
     add d48224d  gnu: linux-libre 5.10: Update to 5.10.79.
     add af6cc0d  gnu: linux-libre 5.4: Update to 5.4.159.
     add f6c0ca2  gnu: linux-libre 4.19: Update to 4.19.217.
     add 2fdd6fe  gnu: linux-libre 4.14: Update to 4.14.255.
     add 727b6e0  gnu: linux-libre 4.9: Update to 4.9.290.
     add 9aab7bb  gnu: linux-libre 4.9: Update to 4.9.292.
     add fb7424f  gnu: terminology: Update to 1.11.0.
     add bd1f300  gnu: pinentry-tty: Update to 1.2.0.
     add 1a72b6e  gnu: Add neatmail.
     add 686b940  gnu: Add nsxiv.
     add d29a9aa  gnu: Add borgmatic.
     add 83289ca  gnu: guix-build-coordinator: Update to 0-36.87508af.
     add f2d345a  doc: Fix guix shell -C example.
     add 97909fd  gnu: python-translate-toolkit: Update to 3.5.1.
     add e95acc0  doc: Add example to dist target.
     add 2ebcc53  gnu: u-boot, u-boot-am335x-boneblack, u-boot-novena: Fix lint 
warnings.
     add 5c2f30d  home-services: on-first-login: Check if XDG_RUNTIME_DIR 
exists.
     add a8b5b40  doc: Add a note about elogind and XDG_RUNTIME_DIR for Guix 
Home.
     add 4dcec60  home-services: Demonadify 'on-first-login' handling.
     add 0aeb7b9  gnu: alot: Disable hanging test.
     add 12c0684  environment: Fix ‘--check’ with exported PS1 variable.
     add 3baa101  gnu: Remove python2-sqlalchemy-utils.
     add 52d9e2c  gnu: python-pyasn1-modules: Update to 0.2.8.
     add e493f54  gnu: python-psycopg2: Update to 2.9.2.
     add eeecee1  gnu: python-sqlalchemy: Update to 1.4.27.
     add d67a5a8  gnu: Remove python2-google-api-client.
     add e5b53b1  gnu: python-uritemplate: Update to 4.1.1.
     add c9b171f  gnu: MPD: Update to 0.23.4.
     add 40a18f4  home: services: Typo fix.
     add 6edfcf3  gnu: home: services: Fix typo.
     add e149853  gnu: home: services: Fix typo.
     add 57bf76d  gnu: home: services: Fix typo.
     add 8f392c4  gnu: r-msfeatures: Fix typo.
     add df80817  gnu: rust-fallible-collections-0.4: Fix typo.
     add 34af64a  gnu: emacs-org-contrib: Fix typo.
     add 4b7517c  gnu: ghc-quickcheck-classes-base: Fix typo.
     add 2c75559  gnu: python-cligj: Fix typo.
     add 7cad499  gnu: scandb: Fix typo.
     add 75cae18  build: wrap-qt-program: Fix typo.
     add 272e8f5  Merge branch 'typo-fixes-20211114'
     add 1fc71de  gnu: python-orderedmultidict: Update to 1.0.1.
     add b18df94  gnu: python2-orderedmultidict: Remove package.
     add da2ee1b  gnu: python-furl: Update to 2.1.3.
     add 6119120  gnu: lagrange: Update to 1.8.2.
     add fa15506  gnu: emacs-request: Update to 0.3.2-1.3336eaa.
     add 76c3e68  gnu: scrot: Update to 1.7.
     add 2b9b974  gnu: diff-so-fancy: Update to 1.4.2.
     add 3789553  gnu: grisbi: Update to 2.0.5.
     add 1e9bed9  gnu: profanity: Update to 0.11.1.
     add 50f3b08  gnu: Add music21.
     add 879bcb7  gnu: Add mtm.
     add 2b1e807  gnu: Add emacs-org-vcard
     add dd1b0d9  gnu: stockfish: Update to 14.1.
     add 01b6429  gnu: Add rust-lifeguard-0.6.
     add 6d5295a  gnu: Add rust-psl-types-2.
     add 492bec6  gnu: Add rust-psl-2.
     add 5489dd3  gnu: Add rust-publicsuffix-2.
     add 3fb4515  gnu: Add rust-no-std-net-0.5.
     add 62939e4  gnu: Add rust-addr-0.14.
     add c8f6f58  gnu: rust-rmp-serde: Update to 0.15.5.
     add d3d064a  gnu: Add rust-twoway-0.2.
     add a19423c  gnu: Add rust-rmp-serde-0.13.
     add a8cce5c  gnu: Add rust-selectors-0.21.
     add e535445  gnu: Add rust-tokio-1.8.
     add ce9b9e7  gnu: Add rust-adblock-0.4.
     add f2d5597  gnu: Add texlive-fira.
     add 373d209  gnu: Add python-hnswlib.
     add 078934b  gnu: python-scipy: Run tests conditionally.
     add f2ad33b  gnu: python-pingouin: Update to 0.5.0.
     add 46432cc  gnu: guile-netlink: Update to 1.1.
     add 616bcc9  gnu: python-scanpy: Run tests conditionally.
     add 333e1b3  gnu: Add cl-periodic-table.
     add 8e18eb8  gnu: Add cl-chemical-compounds.
     add f50c9b4  gnu: Add cl-chemboy.
     add 386db36  gnu: Add python-ta-lib.
     add 3288d6b  gnu: Add python-rtree.
     add 2a32c99  gnu: clang-toolchain: Add libomp.
     add 0ace339  gnu: Add python-multipledispatch.
     add 9373007  gnu: Add python-logical-unification.
     add 37e6f02  gnu: Add python-cons.
     add f661fa8  gnu: Add python-etuples.
     add 1a50164  gnu: Add python-minikanren.
     add 782e997  gnu: python-pytorch: Update to 1.10.0.
     add 21332f3  gnu: hpcguix-web: Update to 0.2.0.
     add fb8e5f5  gnu: borgmatic: Fix typo in description.
     add 563354d  gnu: emacs-marginalia: Update to 0.10.
     add d24333c  gnu: emacs-rustic: Update to 2.1.
     add 9784e14  gnu: emacs-exwm: Update to 0.26.
     add 2b56e47  gnu: emacs-consult: Update to 0.13.
     add a1a7e2b  gnu: julia: Fix llvm-julia version.
     add 1a925d3  gnu: pdfarranger: Update to 1.8.0.
     add ae14076  gnu: emacs-helm: Update to 3.8.1.
     add 847f2ae  gnu: taskwarrior: Update to 2.6.1.
     add a69076e  gnu: node: Add cpe-name.
     add ecbf59a  gnu: Add c-ares-for-node.
     add cae7c3f  gnu: llhttp-bootstrap: Update to 2.1.4 [security-fixes].
     add f3cd70f  gnu: node-lts: Update to 14.18.1 [security fixes].
     add 6391595  gnu: libuv-for-node: Update to 1.42.0.
     add db59071  gnu: guix-build-coordinator: Update to 0-37.200ffe7.
     add 58649b8  doc: Remove obsolete example module import.
     add 1223960  services: cups: Update default timeouts.
     add 95a0f24  gnu: sbcl-cmd: Update to 20211009.
     add 66cfc6a  gnu: sbcl-cl-webkit: Update to 3.2.0.
     add 342f3de  gnu: Add sbcl-cl-tld.
     add 462bb6c  gnu: Add cl-strftime.
     add 6366aaf  gnu: Add exit-hooks.
     add de28e45  gnu: Add cl-base58.
     add d0c3efb  gnu: Add bit-smasher.
     add 3f6953b  gnu: Add cxml-rng.
     add e37bb39  gnu: Add overlord.
     add 3ddfe4c  gnu: Add xpath.
     add f1dd327  gnu: Add fxml.
     add 2d55463  gnu: Add vernacular.
     add e31d48d  gnu: Add cl-https-everywhere.
     add 3af351a  build-system/julia: Enable Julia Pkg to find installed 
packages.
     add 1144695  gnu: julia-pycall: Update to 1.92.5.
     add e9a5fb7  Revert "gnu: Add cl-https-everywhere."
     add 546f853  gnu: Add julia-sundials-jull
     add b2f8186  Revert "home-services: Demonadify 'on-first-login' handling."
     add b4b2bbf  services: openssh: Collect all keys for all users.
     add f39397b  tests: Factorize 'file=?'.
     add 472a0e8  daemon: Do not deduplicate files smaller than 8 KiB.
     add e5d8302  home: services: Fix typo.
     add c322d97  home: services: bash: Emit 'extra-content' first again.
     add f359765  home: Adjust 'guix home import' test for shell aliases.
     add e699eb3  gnu: Add texlive-translator.
     add 9bbbac6  gnu: Add texlive-latex-textpos.
     add 8000fc4  gnu: Add ocaml4.07-re.
     add b531ba4  gnu: Add ocaml4.07-alcotest.
     add c10ba56  gnu: ocaml-lwt: Remove unneeded input.
     add 6347ac8  gnu: Add ocaml4.07-bisect-ppx.
     add fd9b7f8  gnu: ocaml4.07-odoc: Fix inputs.
     add 0a9a00b  gnu: pplacer: Fix build.
     add 206f269  gnu: guix: Update to 9bbbac6.
     add cf48bf8  gnu: s2n: Update to 1.1.0.
     add 5715a07  gnu: aws-c-common: Update to 0.6.11.
     add 2a32ded  gnu: aws-c-io: Update to 0.10.9.
     add 4ff5cd6  gnu: aws-c-cal: Update to 0.5.12.
     add 1a0ed46  gnu: aws-c-http: Update to 0.6.7.
     add cff8a12  gnu: aws-c-compression: Update to 0.2.14.
     add 05be89a  gnu: aws-c-auth: Update to 0.6.4.
     add 2d61354  gnu: aws-c-s3: Update to 0.1.26.
     add d5c9f52  gnu: aws-c-mqtt: Replace patch.
     add 37db6db  gnu: aws-crt-cpp: Update to 0.17.1.
     add c769b8c  gnu: aws-sdk-cpp: Update to 1.9.136.
     add 963ebbc  gnu: aws-c-event-stream: Replace patch.
     add 14f5405  gnu: aws-checksums: Replace patch.
     add 912cb91  gnu: aws-sdk-cpp: Enable text-to-speech library.
     add 7dce1df  gnu: Add texlive-xifthen.
     add eb4edd7  gnu: emacs-flymake-kondor: Update to 0.1.1-0.389b513.
     add 6ed2c5e  gnu: fennel: Update to 1.0.0.
     add 02a6781  gnu: git: Update to 2.34.0.
     add 62e707d  gnu: julia: Update to 1.6.3.
     new 3a317f7  Merge branch 'master' into core-updates-frozen
     new e77df67  gnu: libsoup: Depend on a fixed version of Samba.
     new 669d150  gnu: graphene: Depend on a fixed version of 'git-minimal'.
     new cdb0e04  gnu: python-sgmllib3k: Remove redundant definition.

The 4 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "add" were already present in the repository and have only
been added to this reference.


Summary of changes:
 config-daemon.ac                                   |   11 -
 doc/guix.texi                                      |   88 +-
 doc/local.mk                                       |    3 +-
 gnu/build/bootloader.scm                           |    1 +
 gnu/home/services.scm                              |   21 +-
 gnu/home/services/shells.scm                       |    8 +-
 gnu/home/services/utils.scm                        |    2 +-
 gnu/home/services/xdg.scm                          |    2 +-
 gnu/image.scm                                      |    3 +
 gnu/local.mk                                       |   22 +-
 gnu/packages/admin.scm                             |   10 +-
 gnu/packages/adns.scm                              |   22 +
 gnu/packages/astronomy.scm                         |  114 +-
 gnu/packages/audio.scm                             |   13 +-
 gnu/packages/backup.scm                            |   61 +-
 gnu/packages/benchmark.scm                         |    3 -
 gnu/packages/bioconductor.scm                      |    2 +-
 gnu/packages/bioinformatics.scm                    |  232 ++-
 gnu/packages/boost.scm                             |    7 +
 gnu/packages/bootloaders.scm                       |    6 +-
 gnu/packages/build-tools.scm                       |    4 +-
 gnu/packages/c.scm                                 |  108 +-
 gnu/packages/ci.scm                                |    6 +-
 gnu/packages/cpp.scm                               |   42 +-
 gnu/packages/crates-io.scm                         | 2038 +++++++++++++++++++-
 gnu/packages/crypto.scm                            |   83 +
 gnu/packages/cups.scm                              |    3 -
 gnu/packages/databases.scm                         |   14 +-
 gnu/packages/debian.scm                            |   15 +-
 gnu/packages/diffoscope.scm                        |    4 +-
 gnu/packages/django.scm                            |    4 -
 gnu/packages/dunst.scm                             |    5 +-
 gnu/packages/emacs-xyz.scm                         |  239 ++-
 gnu/packages/engineering.scm                       |    3 -
 gnu/packages/enlightenment.scm                     |    7 +-
 gnu/packages/fcitx5.scm                            |   16 +-
 gnu/packages/finance.scm                           |   35 +-
 gnu/packages/firmware.scm                          |    8 -
 gnu/packages/fonts.scm                             |    6 -
 gnu/packages/game-development.scm                  |    6 -
 gnu/packages/games.scm                             |   16 +-
 gnu/packages/genimage.scm                          |    8 +-
 gnu/packages/geo.scm                               |   37 +
 gnu/packages/gnome-xyz.scm                         |    3 -
 gnu/packages/gnome.scm                             |    2 +-
 gnu/packages/gnupg.scm                             |    7 +-
 gnu/packages/gstreamer.scm                         |    7 -
 gnu/packages/gtk.scm                               |   11 +-
 gnu/packages/guile-xyz.scm                         |   90 +-
 gnu/packages/guile.scm                             |   44 -
 gnu/packages/haskell-apps.scm                      |    3 -
 gnu/packages/haskell-check.scm                     |    2 +-
 gnu/packages/image-viewers.scm                     |   57 +
 gnu/packages/image.scm                             |   16 +-
 gnu/packages/julia-jll.scm                         |  177 +-
 gnu/packages/julia-xyz.scm                         |   73 +-
 gnu/packages/julia.scm                             |   13 +-
 gnu/packages/kodi.scm                              |    3 +-
 gnu/packages/libevent.scm                          |    4 +-
 gnu/packages/linux.scm                             |   35 +-
 gnu/packages/lisp-check.scm                        |   47 +-
 gnu/packages/lisp-xyz.scm                          |  600 +++++-
 gnu/packages/llvm.scm                              |    1 +
 gnu/packages/logging.scm                           |    4 +-
 gnu/packages/lua.scm                               |   29 +-
 gnu/packages/machine-learning.scm                  |    4 +-
 gnu/packages/mail.scm                              |   87 +-
 gnu/packages/maths.scm                             |   25 +
 gnu/packages/messaging.scm                         |  132 +-
 gnu/packages/monitoring.scm                        |    3 -
 gnu/packages/mpd.scm                               |   12 +-
 gnu/packages/music.scm                             |   33 +
 gnu/packages/networking.scm                        |   13 +-
 gnu/packages/node.scm                              |   20 +-
 gnu/packages/ocaml.scm                             |   70 +-
 gnu/packages/package-management.scm                |   18 +-
 gnu/packages/patches/aws-c-auth-cmake-prefix.patch |   13 -
 .../aws-c-auth-disable-networking-tests.patch      |   64 -
 .../aws-c-auth-install-private-headers.patch       |   19 +
 gnu/packages/patches/aws-c-cal-cmake-prefix.patch  |   13 -
 .../patches/aws-c-compression-cmake-prefix.patch   |   13 -
 .../patches/aws-c-event-stream-cmake-prefix.patch  |   13 -
 gnu/packages/patches/aws-c-http-cmake-prefix.patch |   13 -
 .../aws-c-http-disable-networking-tests.patch      |   48 -
 gnu/packages/patches/aws-c-io-cmake-prefix.patch   |   13 -
 .../aws-c-io-disable-networking-tests.patch        |  103 -
 gnu/packages/patches/aws-c-mqtt-cmake-prefix.patch |   13 -
 gnu/packages/patches/aws-c-s3-cmake-prefix.patch   |   13 -
 .../aws-c-s3-disable-networking-tests.patch        |  153 --
 .../patches/aws-checksums-cmake-prefix.patch       |   13 -
 .../patches/aws-crt-cpp-cmake-prefix.patch         |   13 -
 .../aws-crt-cpp-disable-networking-tests.patch     |   47 -
 .../patches/aws-sdk-cpp-cmake-prefix.patch         |   18 -
 .../aws-sdk-cpp-disable-networking-tests.patch     |   44 -
 .../patches/aws-sdk-cpp-disable-werror.patch       |   11 -
 .../patches/bear-disable-preinstall-tests.patch    |   24 +-
 gnu/packages/patches/genimage-mke2fs-test.patch    |   40 +
 gnu/packages/patches/genimage-signedness.patch     |   24 -
 .../patches/python-pytorch-system-libraries.patch  |  164 +-
 .../patches/rust-adblock-ignore-live-tests.patch   |   69 +
 gnu/packages/pdf.scm                               |   22 +-
 gnu/packages/pep.scm                               |    2 +-
 gnu/packages/phabricator.scm                       |    3 -
 gnu/packages/plotutils.scm                         |    3 -
 gnu/packages/pretty-print.scm                      |   15 +-
 gnu/packages/python-build.scm                      |    4 +-
 gnu/packages/python-check.scm                      |   35 +-
 gnu/packages/python-science.scm                    |   15 +-
 gnu/packages/python-web.scm                        |   56 +-
 gnu/packages/python-xyz.scm                        |  355 +++-
 gnu/packages/samba.scm                             |   18 +-
 gnu/packages/scanner.scm                           |    2 +-
 gnu/packages/search.scm                            |    4 +-
 gnu/packages/shells.scm                            |    3 -
 gnu/packages/shellutils.scm                        |   29 +
 gnu/packages/sqlite.scm                            |    7 +-
 gnu/packages/ssh.scm                               |    3 -
 gnu/packages/task-management.scm                   |    4 +-
 gnu/packages/terminals.scm                         |   63 +-
 gnu/packages/tex.scm                               |  118 ++
 gnu/packages/tls.scm                               |   62 +-
 gnu/packages/version-control.scm                   |   78 +-
 gnu/packages/video.scm                             |   16 +-
 gnu/packages/virtualization.scm                    |    7 +-
 gnu/packages/vlang.scm                             |    4 -
 gnu/packages/vpn.scm                               |    3 -
 gnu/packages/web-browsers.scm                      |   19 +-
 gnu/packages/web.scm                               |   17 +-
 gnu/packages/wm.scm                                |    5 +-
 gnu/packages/xdisorg.scm                           |    8 +-
 gnu/packages/xml.scm                               |    4 +-
 gnu/packages/xorg.scm                              |    3 -
 gnu/services/cups.scm                              |    4 +-
 gnu/services/ssh.scm                               |   11 +-
 gnu/services/virtualization.scm                    |   48 +-
 gnu/services/web.scm                               |   10 +-
 gnu/system/image.scm                               |   61 +-
 gnu/tests/web.scm                                  |    5 +-
 guix/build-system/julia.scm                        |    5 +-
 guix/build/julia-build-system.scm                  |   48 +-
 guix/build/qt-utils.scm                            |    2 +-
 guix/import/cran.scm                               |   91 +-
 guix/import/print.scm                              |   85 +-
 guix/import/pypi.scm                               |   47 +-
 guix/import/utils.scm                              |    3 +
 guix/licenses.scm                                  |    2 +
 guix/packages.scm                                  |    2 +-
 guix/scripts/environment.scm                       |    2 +-
 guix/scripts/import/cran.scm                       |   35 +-
 guix/scripts/import/pypi.scm                       |   32 +-
 guix/store/deduplication.scm                       |   69 +-
 guix/tests.scm                                     |   30 +-
 nix/libstore/gc.cc                                 |    4 +-
 nix/libstore/local-store.hh                        |    3 +
 nix/libstore/optimise-store.cc                     |   15 +-
 tests/derivations.scm                              |   14 +-
 tests/egg.scm                                      |    2 +-
 tests/gexp.scm                                     |   11 +-
 tests/home-import.scm                              |    1 +
 tests/nar.scm                                      |    7 +-
 tests/print.scm                                    |   84 +
 tests/pypi.scm                                     |   12 +-
 tests/store-deduplication.scm                      |   41 +-
 tests/store.scm                                    |    4 +-
 164 files changed, 5798 insertions(+), 1920 deletions(-)
 delete mode 100644 gnu/packages/patches/aws-c-auth-cmake-prefix.patch
 delete mode 100644 
gnu/packages/patches/aws-c-auth-disable-networking-tests.patch
 create mode 100644 
gnu/packages/patches/aws-c-auth-install-private-headers.patch
 delete mode 100644 gnu/packages/patches/aws-c-cal-cmake-prefix.patch
 delete mode 100644 gnu/packages/patches/aws-c-compression-cmake-prefix.patch
 delete mode 100644 gnu/packages/patches/aws-c-event-stream-cmake-prefix.patch
 delete mode 100644 gnu/packages/patches/aws-c-http-cmake-prefix.patch
 delete mode 100644 
gnu/packages/patches/aws-c-http-disable-networking-tests.patch
 delete mode 100644 gnu/packages/patches/aws-c-io-cmake-prefix.patch
 delete mode 100644 gnu/packages/patches/aws-c-io-disable-networking-tests.patch
 delete mode 100644 gnu/packages/patches/aws-c-mqtt-cmake-prefix.patch
 delete mode 100644 gnu/packages/patches/aws-c-s3-cmake-prefix.patch
 delete mode 100644 gnu/packages/patches/aws-c-s3-disable-networking-tests.patch
 delete mode 100644 gnu/packages/patches/aws-checksums-cmake-prefix.patch
 delete mode 100644 gnu/packages/patches/aws-crt-cpp-cmake-prefix.patch
 delete mode 100644 
gnu/packages/patches/aws-crt-cpp-disable-networking-tests.patch
 delete mode 100644 gnu/packages/patches/aws-sdk-cpp-cmake-prefix.patch
 delete mode 100644 
gnu/packages/patches/aws-sdk-cpp-disable-networking-tests.patch
 delete mode 100644 gnu/packages/patches/aws-sdk-cpp-disable-werror.patch
 create mode 100644 gnu/packages/patches/genimage-mke2fs-test.patch
 delete mode 100644 gnu/packages/patches/genimage-signedness.patch
 create mode 100644 gnu/packages/patches/rust-adblock-ignore-live-tests.patch



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