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64/69: gnu: Add biosoup.


From: guix-commits
Subject: 64/69: gnu: Add biosoup.
Date: Thu, 11 Nov 2021 10:43:40 -0500 (EST)

rekado pushed a commit to branch master
in repository guix.

commit 4052310e91456530f0b5362f5895255e36d53055
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Thu Nov 11 13:49:12 2021 +0000

    gnu: Add biosoup.
    
    * gnu/packages/bioinformatics.scm (biosoup): New variable.
---
 gnu/packages/bioinformatics.scm | 31 +++++++++++++++++++++++++++++++
 1 file changed, 31 insertions(+)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index a731b9a..8139ce4 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -1323,6 +1323,37 @@ relying on a complex dependency tree.")
 (define-public python2-fastalite
   (package-with-python2 python-fastalite))
 
+(define-public biosoup
+  (package
+    (name "biosoup")
+    (version "0.10.0")
+    (source
+     (origin
+       (method git-fetch)
+       (uri (git-reference
+             (url "https://github.com/rvaser/biosoup";)
+             ;; Corresponds to version 0.10.0
+             (commit "38181f09854ff42cbd9632200a2ec9fb37a4b7b6")))
+       (file-name (git-file-name name version))
+       (sha256
+        (base32
+         "02hvyka703zagx0nvv2yx3dkc748zc8g6qbrpya7r8kfkcl7y8hw"))))
+    (build-system cmake-build-system)
+    (arguments
+     `(#:phases
+       (modify-phases %standard-phases
+         (replace 'check
+           (lambda* (#:key tests? #:allow-other-keys)
+             (when tests?
+               (invoke "./bin/biosoup_test")))))))
+    (native-inputs
+     `(("googletest" ,googletest)))
+    (home-page "https://github.com/rvaser/biosoup";)
+    (synopsis "C++ support library for bioinformatics tools")
+    (description "Biosoup is a C++ collection of header-only data structures
+used for storage and logging in bioinformatics tools.")
+    (license license:expat)))
+
 (define-public ciri-long
   (package
     (name "ciri-long")



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