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branch r-updates updated: gnu: r-biocthis: Set HOME variable.


From: guix-commits
Subject: branch r-updates updated: gnu: r-biocthis: Set HOME variable.
Date: Tue, 02 Nov 2021 12:07:19 -0400

This is an automated email from the git hooks/post-receive script.

rekado pushed a commit to branch r-updates
in repository guix.

The following commit(s) were added to refs/heads/r-updates by this push:
     new 93f09ce  gnu: r-biocthis: Set HOME variable.
93f09ce is described below

commit 93f09cefc7e25fff2bd2da50cdd606efc6675c74
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Tue Nov 2 16:06:34 2021 +0000

    gnu: r-biocthis: Set HOME variable.
    
    * gnu/packages/bioconductor.scm (r-biocthis)[arguments]: Add build phase
    'set-HOME.
---
 gnu/packages/bioconductor.scm | 5 +++++
 1 file changed, 5 insertions(+)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 936be14..ab853cf 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -14183,6 +14183,11 @@ Python environments in a single R session.")
          "08awghsg7q22csb0j9dr8dpb1vkn9gcs9qnhhljxifkw2ahbqia4"))))
     (properties `((upstream-name . "biocthis")))
     (build-system r-build-system)
+    (arguments
+     `(#:phases
+       (modify-phases %standard-phases
+         (add-after 'unpack 'set-HOME
+           (lambda _ (setenv "HOME" "/tmp"))))))
     (propagated-inputs
      `(("r-biocmanager" ,r-biocmanager)
        ("r-fs" ,r-fs)



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