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03/04: gnu: Add python-strawc.
From: |
guix-commits |
Subject: |
03/04: gnu: Add python-strawc. |
Date: |
Fri, 27 Aug 2021 07:39:05 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit db13eb962f5822647cbc88321031615a39d1ff15
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Fri Aug 27 13:24:33 2021 +0200
gnu: Add python-strawc.
* gnu/packages/bioinformatics.scm (python-strawc): New variable.
---
gnu/packages/bioinformatics.scm | 22 ++++++++++++++++++++++
1 file changed, 22 insertions(+)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 1775f5a..0979a86 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -14773,6 +14773,28 @@ produced by Oxford Nanopore Technologies’ MinION,
GridION or PromethION
instruments, or Pacific Biosciences RSII or Sequel sequencers.")
(license license:expat)))
+(define-public python-strawc
+ (package
+ (name "python-strawc")
+ (version "0.0.2.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "strawC" version))
+ (sha256
+ (base32
+ "1z1gy8n56lhriy6hdkh9r82ndikndipq2cy2wh8q185qig4rimr6"))))
+ (build-system python-build-system)
+ (inputs
+ `(("curl" ,curl)
+ ("pybind11" ,pybind11)
+ ("zlib" ,zlib)))
+ (home-page "https://github.com/aidenlab/straw")
+ (synopsis "Stream data from .hic files")
+ (description "Straw is library which allows rapid streaming of contact
+data from @file{.hic} files. This package provides Python bindings.")
+ (license license:expat)))
+
(define-public r-ascat
(package
(name "r-ascat")