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66/80: gnu: r-structuralvariantannotation: Update to 1.8.2.
From: |
guix-commits |
Subject: |
66/80: gnu: r-structuralvariantannotation: Update to 1.8.2. |
Date: |
Tue, 24 Aug 2021 06:31:58 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 514454cc8f54cb9f129f72de0db4e9bbb799ad67
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Tue Aug 24 00:33:18 2021 +0200
gnu: r-structuralvariantannotation: Update to 1.8.2.
* gnu/packages/bioconductor.scm (r-structuralvariantannotation): Update to
1.8.2.
[propagated-inputs]: Add r-genomeinfodb, r-iranges, r-s4vectors, and
r-summarizedexperiment.
---
gnu/packages/bioconductor.scm | 8 ++++++--
1 file changed, 6 insertions(+), 2 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index c8e33cc..0d9df49 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -4221,24 +4221,28 @@ graph construction.")
(define-public r-structuralvariantannotation
(package
(name "r-structuralvariantannotation")
- (version "1.8.1")
+ (version "1.8.2")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "StructuralVariantAnnotation" version))
(sha256
- (base32 "13q6zbdkpx1iw6n75pggg50f9q3zb7k3dxjdra8mhi6zin7018j8"))))
+ (base32 "04ac4mjh3pgdlws0aiacqg0vd7bhg890w44r7b90p947c3rk1mfw"))))
(build-system r-build-system)
(propagated-inputs
`(("r-assertthat" ,r-assertthat)
("r-biocgenerics" ,r-biocgenerics)
("r-biostrings" ,r-biostrings)
("r-dplyr" ,r-dplyr)
+ ("r-genomeinfodb" ,r-genomeinfodb)
("r-genomicfeatures" ,r-genomicfeatures)
("r-genomicranges" ,r-genomicranges)
+ ("r-iranges" ,r-iranges)
("r-rlang" ,r-rlang)
("r-rtracklayer" ,r-rtracklayer)
+ ("r-s4vectors" ,r-s4vectors)
("r-stringr" ,r-stringr)
+ ("r-summarizedexperiment" ,r-summarizedexperiment)
("r-variantannotation" ,r-variantannotation)))
(native-inputs
`(("r-knitr" ,r-knitr)))
- 52/80: gnu: r-tensorflow: Update to 2.6.0., (continued)
- 52/80: gnu: r-tensorflow: Update to 2.6.0., guix-commits, 2021/08/24
- 53/80: gnu: r-keras: Update to 2.6.0., guix-commits, 2021/08/24
- 51/80: gnu: r-opencpu: Update to 2.2.5., guix-commits, 2021/08/24
- 57/80: gnu: r-rmarkdown: Update to 2.10., guix-commits, 2021/08/24
- 56/80: gnu: r-readr: Update to 2.0.1., guix-commits, 2021/08/24
- 58/80: gnu: r-rsqlite: Update to 2.2.8., guix-commits, 2021/08/24
- 60/80: gnu: r-biomart: Update to 2.48.3., guix-commits, 2021/08/24
- 62/80: gnu: r-ensembldb: Update to 2.16.4., guix-commits, 2021/08/24
- 63/80: gnu: r-genomicfeatures: Update to 1.44.1., guix-commits, 2021/08/24
- 65/80: gnu: r-rtracklayer: Update to 1.52.1., guix-commits, 2021/08/24
- 66/80: gnu: r-structuralvariantannotation: Update to 1.8.2.,
guix-commits <=
- 68/80: gnu: r-chippeakanno: Update to 3.26.3., guix-commits, 2021/08/24
- 71/80: gnu: r-ggtree: Update to 3.0.3., guix-commits, 2021/08/24
- 72/80: gnu: r-batchelor: Update to 1.8.1., guix-commits, 2021/08/24
- 73/80: gnu: r-dose: Update to 3.18.2., guix-commits, 2021/08/24
- 75/80: gnu: r-universalmotif: Update to 1.10.2., guix-commits, 2021/08/24
- 74/80: gnu: r-clusterprofiler: Update to 4.0.4., guix-commits, 2021/08/24
- 76/80: gnu: r-biocset: Update to 1.6.1., guix-commits, 2021/08/24
- 77/80: gnu: r-beachmat: Update to 2.8.1., guix-commits, 2021/08/24
- 64/80: gnu: r-limma: Update to 3.48.3., guix-commits, 2021/08/24
- 80/80: gnu: r-delayedmatrixstats: Update to 1.14.2., guix-commits, 2021/08/24