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branch core-updates-frozen updated (bc55f30 -> b029be2)
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From: |
guix-commits |
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Subject: |
branch core-updates-frozen updated (bc55f30 -> b029be2) |
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Date: |
Thu, 29 Jul 2021 20:23:38 -0400 (EDT) |
mbakke pushed a change to branch core-updates-frozen
in repository guix.
from bc55f30 gnu: util-linux: Explicitly depend on 'file'.
add 7f2b930 gnu: mg: Fix reference to native diffutils.
add 5d2e3b6 gnu: mg: Set PKG_CONFIG instead of substituting.
add 2fbffcf gnu: Add omemo-wget.
add 53e445c gnu: libxscrnsaver: Propagate libx11 and libxext, as per
pkg-config file.
add 00c8a28 gnu: gspell: Propagate glib and gtk+, as per pkg-config file.
add 0f46e0b gnu: evisum: Update to 0.5.13.
add bfa847d gnu: Add node-acorn.
add d16148f gnu: Add node-uglify-js.
add 385c485 build: Update uglifyjs for minify-build-system.
add 4cda5a4 gnu: git-annex: Update to 8.20210714.
add 703f932 gnu: Add powercap.
add 51157d4 import/print: package->code: Fix license object.
add f8790ba gnu: zeromq: Enable DRAFTs.
add 3436d3f gnu: Add emacs-zmq.
add 5e437ce gnu: Add emacs-jupyter.
add de50ff1 gnu: visidata: Update to 2.5.
add aa1b756 gnu: Add python-pyhull.
add 6bd1d4a gnu: Add nomad-optimizer.
add c65183b gnu: Add python-langdetect.
add 52058a1 gnu: Add searx.
add d84c249 gnu: icedove: Update to 78.12.0 [security fixes].
add e1f9a10 gnu: cl-authentic: Update to 0.1.2-2.4e9194d.
add 7592245 gnu: txr: Build documentation.
add 6a0658a gnu: txr: Fix license installation.
add 59d09bf gnu: txr: Update to 266.
add ac84044 gnu: python-graph-tool: Update to 2.43.
add b8e7b28 gnu: Add sequeler.
add 541066a gnu: python-graph-tool: Sort inputs alphabetically.
add 7b9c441 gnu: claws-mail: Use absolute paths to referenced programs.
add e644e45 gnu: pipe-viewer: Correct references to youtube-dl program.
add a4d9002 gnu: xpra: Update to 4.2.1.
add 1a4c7dd gnu: xpra: Add bash-minimal.
add a2f8ec9 gnu: gpodder: Add python-mutagen (fixes one of its addons).
add c441356 gnu: gpodder: Add bash-minimal.
add d68d84e gnu: gpodder: Make the check phase honor the tests? argument.
add 3f403bb gnu: rust-sha1-0.2: Skip tests.
add 7f43bc6 gnu: rust-openssl-0.7: Skip build.
add e2dae72 gnu: rust-openssl-sys-extras-0.7: Skip build.
add 5261712 gnu: Add python-tldr.
add 2c1cdbb gnu: xorg.scm: Add missing module import.
add 4a136a3 gnu: dealii: Update to 9.3.1 and clean up.
add 9d21c67 gnu: Add libgpiod.
add 2f41e95 gnu: catfish: Update to 4.16.1.
add ce27cde gnu: txr: Reduce closure size.
add f6802a9 gnu: Add r-norm.
add f711ba2 gnu: Add r-naniar.
add 2925d84 gnu: Add r-glinternet.
add 117988b gnu: Add r-rmisc.
add 18a02fe gnu: Add tombo.
add 086c680 gnu: checkm: Rename and update to 1.1.3.
add 2b665b8 gnu: Add python-pyvcf.
add 690df95 gnu: Add nanosv.
add ed636ba gnu: Add r-ascat.
add 73830b5 gnu: Add r-battenberg.
add d57c34d gnu: Add python-bash-kernel.
add 2818081 gnu: Add python-sparqlwrapper.
add 403a689 gnu: Add python-sparqlkernel.
add 1f07d44 gnu: extempore: Update to 0.8.9.
add 4f51a4a utils: Do not request block buffering in pretty-print-table.
add de1ae96 gnu: guile-git: Update to 0.5.2.
add e9d47ee gnu: Add emacs-seeing-is-believing.
add 55db762 gnu: onionshare: Update to 2.3.2.
add 309b38b gnu: python-biopython: Update to 1.73.
add cc4906d gnu: Add htslib-1.10.
add 877792a gnu: python-pysam: Update to 0.16.0.1.
add fd8aea0 gnu: python-pysam: Make the check phase honor the tests?
argument.
add 5535d54 gnu: python-abjad: Rename to abjad.
add dd7c2d2 gnu: abjad: Move python-ply to propagated-inputs.
add 18f9e21 gnu: abjad: Improve description.
add 91c42e4 gnu: abjad: Move lilypond to inputs.
add 454460c gnu: abjad: Remove obsolete phase.
add a909460 gnu: Add abjad-ext-rmakers.
add ccfcbad gnu: Add abjad-ext-nauert.
add 4c63efa gnu: Add abjad-ext-ipython.
add b05a1eb gnu: Add python-dolfin-adjoint.
add c5baff1 gnu: Add r-webutils
add 2b6dd1b gnu: Add r-protolite
add 9cfa6c3 gnu: Add r-opencpu
add aa2686c gnu: r-opencpu: Update to 2.2.4.
add d98fc80 gnu: Add cl-libxml2.
add 89ea091 gnu: Add drawterm.
add 785c96f gnu: Add radvd.
add 4e19ad0 gnu: gnome-maps: Update to 3.38.5.
add b48bc89 gnu: pari-gp: Update to 2.13.2.
add 1665bb0 gnu: hpcguix-web: Update to 0.1.0.
add 8bcd920 gnu: Add modules.
add 7273b66 gnu: modules: Avoid FHS file names in 'add.modules'.
add efcd669 gnu: tmux-themepack: Update to 1.1.0.
add c4918b5 gnu: tmux-themepack: Tweak description.
add 379bb23 gnu: php: Update to 7.4.21.
add 277f580 gnu: graphviz: Use HTTPS home page.
add c3c003b gnu: java-xmlpull2: Use mirrored source and archived home
page.
add fe0c3ae gnu: Add feeder.
add e463e09 services: dhcpd: Fix activation with IPv6 configuration.
add c7b51b7 gnu: esmtp: Fix build with libesmtp >= 1.1.0.
add 45881ea gnu: perl-http-cookiejar: Update to 0.012.
add 17a8656 gnu: weston: Update to 9.0.0 and adjust arguments+inputs
accordingly.
add e0fc091 gnu: weston: Fix package inputs.
add dd3de0c gnu: freerdp: Propagate some inputs as per pkg-config files.
add f703bef gnu: weston: Enable some features.
add 32b02fd gnu: emacs-nov-el: Update to 0.3.4.
add a92dfbc gnu: gmnisrv: Update to 0-2.32854b7.
add 769326c gnu: Add marble-qt.
add d1318cb gnu: oil: Update to 0.9.0.
add ed9d146 gnu: oil: Respect #:tests?.
add aaf94ec gnu: Add emacs-ob-async.
add 8854acd gnu: Add python-hyperopt.
add 5079aa2 gnu: r-structuralvariantannotation: Update to 1.8.1.
add 199f9e9 gnu: marble-qt: Fix Git source URL.
add cbeafb3 gnu: marble-qt: Fix source file name.
add 6fd2f88 gnu: emacs-ebdb: Update to 0.7.
add edca830 gnu: emacs-pyim: Update to 3.9.3.
add b81ab18 gnu: emacs-aggressive-indent: Update to 1.10.0.
add 1bcf2da gnu: emacs-flycheck-grammalecte: Update to 2.0.
add 1d8521d gnu: emacs-modus-themes: Update to 1.5.0.
add 4755de6 gnu: emacs-corfu: Update to 0.10.
add 35d4bca gnu: emacs-counsel-etags: Update to 1.9.17.
add a3b6e90 gnu: emacs-ebuild-mode: Update to 1.53.
add f91fceb gnu: java-commons-codec: Don't return #t from phases.
add 94ec198 gnu: java-commons-codec: Fix build on non-huge-memory
machines.
add 3e8537c gnu: java-commons-codec: Update to 1.15.
add 900c2ca gnu: ruby-stackprof: Update to 0.2.17.
add 11afd46 gnu: ruby-stackprof: Build (more) reliably.
add eb1a5dd gnu: mgba: Update to 0.9.2.
add 35b3c7c gnu: giac: Update to 1.7.0-21.
add 16f0bdf gnu: python-pikepdf: Update to 2.15.1.
add 778af01 gnu: rosegarden: Update to 21.06.1.
add 1829e9d gnu: wireshark: Update to 3.4.7.
add 781a2be gnu: gsegrafix: Update to 1.0.7.2.
add e856396 gnu: Remove libgnomeprint.
add 11d8a47 gnu: Remove libgnomeprintui.
add 4831f4e gnu: Update Zrythm Git URLs.
add 69ce8f3 gnu: xournalpp: Update to 1.1.0.
add 7b669da gnu: rust-memoffset-0.6: Update to 0.6.4.
add 088e9b5 gnu: Add rust-nix-0.21.
add d16694b gnu: bat: Update to 0.18.2.
add 99ca1ae gnu: Add segemehl.
add 3e5eff8 gnu: Add seqan 3.
add 151c546 gnu: uim: Enable 'uim-fep' to support the use of uim in text
terminal.
add e286e16 gnu: linux-libre 5.13: Update to 5.13.4.
add 766d137 gnu: linux-libre: Update to 5.12.19.
add 2c1382efd gnu: linux-libre 5.10: Update to 5.10.52.
add 75e647c gnu: linux-libre 5.4: Update to 5.4.134.
add b779450 gnu: linux-libre 4.19: Update to 4.19.198.
add beb67e7 gnu: linux-libre 4.14: Update to 4.14.240.
add 3a55b7a gnu: linux-libre 4.9: Update to 4.9.276.
add 93c6895 gnu: linux-libre 4.4: Update to 4.4.276.
add 559f804 gnu: linux-libre 5.13: Update to 5.13.5.
add 1f6793f gnu: linux-libre 5.10: Update to 5.10.53.
add 456776e gnu: linux-libre 5.4: Update to 5.4.135.
add 599b173 gnu: guix-jupyter: Update to 0.2.2.
add 0a1ea2b gnu: ghc-8.8: Update to 8.8.4.
add 3bbbb24 gnu: interception-dual-function-keys: Update to 1.4.0.
add 56de60c gnu: interception-dual-function-keys: Minor fixes.
add 684259d gnu: Add python-flask-misaka.
add 3314764 gnu: Mutt: Update to 2.1.1.
add 274fcfb gnu: gmnisrv: Disable tests using #:tests?.
add 3344f70 gnu: gmnisrv: Use #:make-flags, and cross-compile.
add b459c39 gnu: gmnisrv: Remove dependency on /etc/mime.types.
add e17f063 gnu: gmnisrv: Fix configuration search path.
add e76423c gnu: calibre: Update to 5.21.0.
add 0ca6e13 gnu: certbot, python-acme: Update to 1.17.0.
add daaa3ba gnu: Add rust-sysinfo-0.18.
add 2c78572 gnu: Add rust-is-executable-1.
add 483e806 gnu: rust-arrow-4: Update to 4.4.0.
add e376b00 gnu: Add rust-overload-0.1.
add f75044e gnu: rust-parquet-4: Update to 4.4.0.
add 293d406 gnu: Add rust-polars-core-0.14.
add 08dfad9 gnu: Add rust-polars-arrow-0.14.
add ed18419 gnu: Add rust-simdutf8-0.1.
add cd6a1e5 gnu: Add rust-polars-io-0.14.
add f686977 gnu: Add rust-polars-lazy-0.14.
add afec299 gnu: Add rust-polars-0.14.
add 3aed641 gnu: Add rust-rstest-0.10.
add 38a3cac gnu: Add rust-s3handler-0.7.
add aadcdd2 gnu: Add rust-tui-0.15.
add 0f32429 gnu: rust-unicode-segmentation-1: Update to 1.8.0.
add 8df7c61 gnu: Add rust-shadow-rs-0.6.
add 240c734 gnu: Add rust-thread-tree-0.3.
add 355ffee gnu: Add rust-matrixmultiply-0.3.
add 5cbfd5c gnu: Add rust-ndarray-0.15.
add 8eb2085 gnu: rust-minus-3: Update to 3.4.0.
add 88625b2 gnu: rust-indexmap-1: Update to 1.7.0.
add 9a38d56 gnu: Add rust-calamine-0.18.
add 20e6b7c gnu: Add rust-mp4-0.8.
add 29ef6d0 gnu: nushell: Update to 0.34.0.
add 87f6491 gnu: Remove rust-bat-0.17.
add 95c214e gnu: WebKitGTK: Update to 2.32.3 [security fixes]
add 5dc4fe1 gnu: sudo: Update to 1.9.7p2.
add 78daf9e derivations: Make 'coalesce-duplicate-inputs' linear in the
number of inputs.
add 8cfd9ef gnu: mesa-opencl-icd: Use absolute path for the library.
add 157f2f7 gnu: Add emacs-org-cv.
add 3c76399 gnu: emacs-org-roam: Update to 2.0.0.
add 3968134 gnu: emacs-org-roam-bibtex: Update to 0.6.0.
add 143d21f gnu: emacs-typit: Fix dictionary location.
add 4c4cf3d gnu: emacs-typit: Update to 0.2.1-2.fa125bf.
add f62c140 gnu: emacs-elpher: Update to 2.10.3.
add f87f60a gnu: emacs-link-hint: Update to 0.1-3.9fbf196.
add d0ec739 gnu: telescope: Update to 0.4.1.
add b07c7f0 gnu: python-pikepdf: Update to 2.16.0.
add 8afd855 gnu: global: Fix lisp install dir.
add 7d93b21 gnu: glibc-for-bootstrap: Update patch.
add 2459cff gnu: Add utf8proc-2.6.1.
add 7db9573 gnu: Add pcre2-10.36.
add 4709b74 gnu: openlibm: Update to 0.7.4.
add 1978d71 gnu: openlibm: Fix cross-compiling.
add 2d4fa64 gnu: julia-staticarrays: Update to 1.2.5
add 0faf5f1 gnu: Add curl-ssh.
add 55bb794 gnu: julia: Update to 1.6.1.
add 6adea67 gnu: libuv-julia: Clean up package definition.
add cc85829 gnu: llvm-julia: Overide build-type.
add 6886c49 gnu: julia: Skip tests on aarch64-linux.
add f7eaa69 gnu: Add julia-preferences.
add cbee534 gnu: julia-jllwrappers: Add julia-preferences.
add a897784 gnu: global: Update to 6.6.7.
add 8832df0 gnu: julia-compat: Update to 3.31.0.
add 21747ff gnu: julia-datavalues: Skip tests.
add fcc900b gnu: julia-docstringextensions: Skip tests.
add c20c9e1 gnu: julia-distances: Update flakey tests.
add c486a61 gnu: cmake: Update to 3.21.1.
add 2422fbf gnu: python2-cloudpickle: Override version, source, and
native-inputs.
add 145296d gnu: python-cloudpickle: Update to 1.6.0.
add 27c6cab gnu: python-numexpr: Update to 2.7.3.
add f01d4b1 gnu: python-partd: Update to 1.2.0.
add 242221e gnu: python-dask: Update to 2021.7.1.
add 3a150e9 gnu: python-pandas: Update to 1.3.0.
add 532cfc5 gnu: python-pyarrow: Fix parquet support.
add 45ee09d gnu: Add python-heapdict.
add 4143128 gnu: Add python-zict.
add 251bfbc gnu: Add python-distributed.
add 042b697 gnu: Add python-modin.
add 9ac9bc6 gnu: r-with-tests: Hardcode path to coreutils’ rm
add f39deac gnu: Add r-datawizard.
add 6e27f27 gnu: Add r-lobstr.
add 55a8d2f gnu: r-googlesheets4: Update to 1.0.0.
add 24ad918 gnu: r-ggpp: Update to 0.4.1.
add 16c3eba gnu: r-rvest: Update to 1.0.1.
add e1a57fc gnu: r-jpeg: Update to 0.1-9.
add efaa5499 gnu: r-fastmatch: Update to 1.1-3.
add 57f04c6 gnu: r-laplacesdemon: Update to 16.1.6.
add 165ecfb gnu: r-cli: Update to 3.0.1.
add 76211cb gnu: r-utf8: Update to 1.2.2.
add 1ba8c81 gnu: r-vim: Update to 6.1.1.
add db54fbe gnu: r-rastervis: Update to 0.50.3.
add 3bc9708 gnu: r-renv: Update to 0.14.0.
add 8816d7e gnu: r-officer: Update to 0.3.19.
add c633e5f gnu: r-flextable: Update to 0.6.7.
add dce0112 gnu: r-doby: Update to 4.6.11.
add 0af4e95 gnu: r-survey: Update to 4.1-1.
add 4590f8b gnu: r-glmmtmb: Update to 1.1.2.
add 7a8081f gnu: r-bayestestr: Update to 0.10.5.
add ce8738a gnu: r-performance: Update to 0.7.3.
add 9e56bb3 gnu: r-sjplot: Update to 2.8.9.
add 40648a1 gnu: r-credentials: Update to 1.3.1.
add c210531 gnu: r-afex: Update to 1.0-1.
add a6044a7 gnu: r-rgl: Update to 0.107.10.
add f04f408 gnu: r-parallelly: Update to 1.27.0.
add d57de3d gnu: r-compositions: Update to 2.0-2.
add c84a2c1 gnu: r-wk: Update to 0.5.0.
add d5e5809 gnu: r-adegenet: Update to 2.1.4.
add b213518 gnu: r-rttf2pt1: Update to 1.3.9.
add c1919da gnu: r-styler: Update to 1.5.1.
add 7387194 gnu: r-sysfonts: Update to 0.8.4.
add 03e4676 gnu: r-showtext: Update to 0.9-3.
add 49979bf gnu: r-seewave: Update to 2.1.8.
add 35f9a75 gnu: r-isoband: Update to 0.2.5.
add 7b41c93 gnu: r-hardhat: Update to 0.1.6.
add 9a5901e gnu: r-spatstat-geom: Update to 2.2-2.
add d3b8b67 gnu: r-spatstat-core: Update to 2.3-0.
add 5fa0448 gnu: r-spatstat-linnet: Update to 2.3-0.
add 260d29b gnu: r-workflows: Update to 0.2.3.
add ff971f4 gnu: r-tune: Update to 0.1.6.
add 5ceaaec gnu: r-workflowsets: Update to 0.1.0.
add 5fe6129 gnu: r-parsnip: Update to 0.1.7.
add 1b06cf5 gnu: r-modeldata: Update to 0.1.1.
add 6833c00 gnu: r-phangorn: Update to 2.7.1.
add 0f5b85b gnu: r-lpme: Update to 1.1.2.
add 36e993e gnu: r-mlr3misc: Update to 0.9.3.
add 42085a6 gnu: r-readtext: Update to 0.81.
add 7f244cc gnu: r-tzdb: Update to 0.1.2.
add b33be7b gnu: r-vroom: Update to 1.5.3.
add 5fb96b1 gnu: r-stringi: Update to 1.7.3.
add ee2bae9 gnu: r-pryr: Update to 0.1.5.
add 8c74831 gnu: r-tibble: Update to 3.1.3.
add 92c837f gnu: r-readr: Update to 2.0.0.
add a30bcf6 gnu: r-rcpparmadillo: Update to 0.10.6.0.0.
add 8934c48 gnu: r-blob: Update to 1.2.2.
add e2ca38e gnu: r-ranger: Update to 0.13.1.
add acc6207 gnu: r-ensembldb: Update to 2.16.3.
add fd0851e gnu: r-chippeakanno: Update to 3.26.2.
add 336b110 gnu: r-scone: Update to 1.16.1.
add 73fa220 gnu: r-motifbreakr: Update to 2.6.1.
add 8d9626d gnu: r-annotatr: Update to 1.18.1.
add d0d3637 gnu: r-rsubread: Update to 2.6.4.
add 9d7eb48 gnu: r-mixomics: Update to 6.16.2.
add a32241f gnu: r-catalyst: Update to 1.16.2.
add 4f108e4 gnu: linux-libre: Update to 5.13.6.
add a137816 gnu: linux-libre 5.10: Update to 5.10.54.
add 7400d3e gnu: linux-libre 5.4: Update to 5.4.136.
add 278fc1e gnu: linux-libre 4.19: Update to 4.19.199.
add f836b47 gnu: linux-libre 4.14: Update to 4.14.241.
add 7c31c37 gnu: linux-libre 4.9: Update to 4.9.277.
add 7af47b8 gnu: linux-libre 4.4: Update to 4.4.277.
add 59dd6df gnu: Add emacs-nasm-mode.
add 79a99af gnu: emacs-org-fragtog: Update to 0.3.3.
add 3a59d72 gnu: emacs-solaire-mode: Update to 2.0.2.
add 87b409d gnu: mame: Update to 0.234.
add e4e9037 gnu: snap: Update to 6.9.0.
add 3ef3f79 gnu: emacs-nswbuff: Update to 1.3.
add 01cc360 gnu: emacs-csharp-mode: Update to 0.12.0.
add 74dad2c gnu: python-pikepdf: Update to 2.16.1.
add 7975a64 gnu: julia-tracker: Patch for julia-1.6.
add 1cc36f5 gnu: julia-nnlib: Update to 0.7.25.
add d09223e gnu: julia-rotations: Update to 1.0.2-1.b599102.
add 226af89 gnu: julia-fuzzycompletions: Adjust test suite for julia-1.6.
add 2287633 gnu: julia-specialfunctions: Update to 1.6.0.
add 4a79a39 gnu: julia-chainrules: Update to 1.1.0.
add 038a7dd gnu: julia-chainrulescore: Update to 1.0.2.
add e477487 gnu: julia-chainrulestestutils: Update to 1.0.0.
add 071f036 gnu: julia-finitedifferences: Update to 0.12.17.
add 2d25b2f gnu: julia-staticarrays: Update to 1.2.8.
add 9fe69d7 gnu: julia-tables: Update to 1.4.4.
add f6bc465 gnu: julia-unitful: Update to 1.9.0.
add 8d78799 gnu: julia-zygote: Update to 0.6.17.
add 0f15f77 gnu: julia-ellipsisnotation: Adjust test suite for julia-1.6.
add 6752fc1 gnu: julia-imageinterminal: Udate to 0.4.7.
add f93a983 gnu: julia-recursivearraytools: Update to 2.16.1.
add bfd92c3 gnu: julia-interpolations: Update to 0.13.3.
add 7067111 gnu: julia-arrayinterface: Update to 3.1.19.
add 0154626 gnu: julia-arraylayouts: Update to 0.7.3.
add af36994 gnu: julia-axisarrays: Update to 0.4.4.
add 5d45f7b gnu: julia-bandedmatrices: Update to 0.16.10.
add ad8c404 gnu: julia-benchmarktools: Update to 1.1.1.
add f0398a0 gnu: julia-blockarrays: Update to 0.16.3.
add b5df917 gnu: julia-blockbandedmatrices: Update to 0.10.7.
add ebe8aa8 gnu: julia-colorschemes: Update to 3.13.0.
add 9cd7145 gnu: julia-compat: Update to 3.32.0.
add 57e5c90 gnu: julia-constructionbase: Update to 1.3.0.
add e076ed6 gnu: julia-dataapi: Update to 1.7.0.
add 23dbed6 gnu: julia-dictionaries: Update to 0.3.10.
add 231387c gnu: julia-exprtools: Update to 0.1.6.
add ebd7ca3 gnu: julia-fillarrays: Update to 0.12.1.
add f7d79b9 gnu: julia-finitediff: Update to 2.8.1.
add 92929c2 gnu: julia-genericschur: Update to 0.5.1.
add a9292ce gnu: julia-http: Update to 0.9.12.
add fa86b01 gnu: julia-imagecore: Update to 0.9.1.
add 4a69ab1 gnu: julia-irtools: Update to 0.4.3.
add 6087d0d gnu: julia-json3: Update to 1.9.0.
add 5f432ed gnu: julia-lazyarrays: Update to 0.21.11.
add 3127f37 gnu: julia-matrixfactorizations: Update to 0.8.4.
add f70db25 gnu: julia-mutablearithmetics: Update to 0.2.20.
add c230520 gnu: julia-offsetarrays: Update to 1.10.3.
add 230d77d gnu: julia-plotutils: Update to 1.0.11.
add 831ce9b gnu: julia-recipespipeline: Update to 0.3.4.
add b9264f2 gnu: julia-simpletraits: Update to 0.9.4.
add bf796e1 gnu: julia-sortingalgorithms: Update to 1.0.1.
add ace03e0 gnu: julia-static: Update to 0.3.0.
add f5ec4cd gnu: julia-staticarrays: Update to 1.2.9.
add 6bf32d1 gnu: julia-typedtables: Update to 1.4.0.
add 4707ab2 gnu: julia-weakrefstrings: Update to 1.1.0.
add b95fb85 gnu: vim-guix-vim: Update to 0.3.0.
add ef61998 gnu: apache-arrow: Update to 5.0.0.
add 74abd1e gnu: r-arrow: Update to 5.0.0.
add fe6ad60 gnu: r-rpostgresql: Update to 0.7.
add b1b605f gnu: r-broom: Update to 0.7.9.
add 244fda5 gnu: r-stringdist: Update to 0.9.7.
add 5eac5eb gnu: r-vioplot: Update to 0.3.7.
add 07726b8 gnu: r-pillar: Update to 1.6.2.
add 1cc30d1 gnu: r-ggeffects: Update to 1.1.1.
add d30f6cd gnu: r-summarytools: Update to 1.0.0.
add 75318af gnu: r-sf: Update to 1.0-2.
add 4b32290 gnu: r-dalex: Update to 2.3.0.
add a648eaa gnu: r-leiden: Update to 0.3.9.
add 1d2b623 gnu: r-matrixcalc: Update to 1.0-5.
add 03260ba gnu: r-mgsub: Update to 1.7.3.
add d9a5c8b gnu: r-lwgeom: Update to 0.2-7.
add 234549d gnu: r-protolite: Update to 2.1.1.
add 2c625a4 gnu: r-e1071: Update to 1.7-8.
add 5a1ce6c gnu: r-matrixstats: Update to 0.60.0.
add a7ac198 services: setuid: More configurable setuid support.
add a85ec0b services: Migrate to <setuid-program>.
add 45235e6 system: Add (gnu system setuid).
add c022c1e gnu: php: Update to 7.4.22 [security fixes].
add e06beb5 gnu: r-reportingtools: Update to 2.32.1.
add ffb3818 gnu: r-xcms: Update to 3.14.1.
new b029be2 Merge branch 'master' into core-updates-frozen
The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails. The revisions
listed as "add" were already present in the repository and have only
been added to this reference.
Summary of changes:
Makefile.am | 4 -
doc/guix.texi | 45 +-
gnu/build/activation.scm | 38 +-
gnu/local.mk | 5 +
gnu/packages/admin.scm | 36 +-
gnu/packages/algebra.scm | 20 +-
gnu/packages/audio.scm | 8 +-
gnu/packages/aux-files/linux-libre/5.12-arm.conf | 9984 -----------------
gnu/packages/aux-files/linux-libre/5.12-arm64.conf | 10249 -----------------
gnu/packages/aux-files/linux-libre/5.12-i686.conf | 10829 ------------------
.../aux-files/linux-libre/5.12-x86_64.conf | 10877 -------------------
gnu/packages/bioconductor.scm | 46 +-
gnu/packages/bioinformatics.scm | 359 +-
gnu/packages/cmake.scm | 10 +
gnu/packages/code.scm | 10 +-
gnu/packages/cran.scm | 441 +-
gnu/packages/crates-io.scm | 749 +-
gnu/packages/curl.scm | 13 +
gnu/packages/databases.scm | 91 +-
gnu/packages/ebook.scm | 4 +-
gnu/packages/education.scm | 7 +-
gnu/packages/emacs-xyz.scm | 365 +-
gnu/packages/emulators.scm | 58 +-
gnu/packages/enlightenment.scm | 11 +-
gnu/packages/freedesktop.scm | 45 +-
gnu/packages/geo.scm | 55 +-
gnu/packages/gl.scm | 25 +-
gnu/packages/gnome.scm | 70 +-
gnu/packages/gnuzilla.scm | 8 +-
gnu/packages/gpodder.scm | 11 +-
gnu/packages/graph.scm | 24 +-
gnu/packages/graphviz.scm | 2 +-
gnu/packages/guile.scm | 4 +-
gnu/packages/haskell-apps.scm | 4 +-
gnu/packages/haskell.scm | 12 +-
gnu/packages/java.scm | 18 +-
gnu/packages/julia-jll.scm | 3 +
gnu/packages/julia-xyz.scm | 302 +-
gnu/packages/julia.scm | 431 +-
gnu/packages/jupyter.scm | 88 +
gnu/packages/linux.scm | 156 +-
gnu/packages/lisp-xyz.scm | 132 +-
gnu/packages/lisp.scm | 118 +-
gnu/packages/machine-learning.scm | 51 +
gnu/packages/mail.scm | 19 +-
gnu/packages/maths.scm | 280 +-
gnu/packages/messaging.scm | 40 +
gnu/packages/music.scm | 213 +-
gnu/packages/networking.scm | 11 +-
gnu/packages/node-xyz.scm | 27 +
gnu/packages/package-management.scm | 121 +-
gnu/packages/patches/esmtp-add-lesmtp.patch | 37 +
.../extempore-unbundle-external-dependencies.patch | 316 +-
gnu/packages/patches/glibc-bootstrap-system.patch | 28 +-
gnu/packages/patches/julia-tracker-16-compat.patch | 40 +
.../patches/marble-qt-add-qt-headers.patch | 189 +
gnu/packages/pcre.scm | 15 +
gnu/packages/pdf.scm | 19 +-
gnu/packages/php.scm | 16 +-
gnu/packages/plan9.scm | 66 +
gnu/packages/python-science.scm | 210 +-
gnu/packages/python-web.scm | 25 +
gnu/packages/python-xyz.scm | 218 +-
gnu/packages/rdesktop.scm | 7 +-
gnu/packages/rdf.scm | 27 +
gnu/packages/ruby.scm | 27 +-
gnu/packages/rust-apps.scm | 7 +-
gnu/packages/search.scm | 53 +-
gnu/packages/shells.scm | 805 +-
gnu/packages/simulation.scm | 81 +
gnu/packages/statistics.scm | 138 +-
gnu/packages/text-editors.scm | 21 +-
gnu/packages/textutils.scm | 43 +
gnu/packages/tls.scm | 6 +-
gnu/packages/tmux.scm | 63 +-
gnu/packages/tor.scm | 10 +-
gnu/packages/{task-runners.scm => uglifyjs.scm} | 43 +-
gnu/packages/video.scm | 6 +-
gnu/packages/vim.scm | 6 +-
gnu/packages/visidata.scm | 4 +-
gnu/packages/web-browsers.scm | 13 +-
gnu/packages/web.scm | 184 +-
gnu/packages/webkit.scm | 4 +-
gnu/packages/xfce.scm | 5 +-
gnu/packages/xml.scm | 8 +-
gnu/packages/xorg.scm | 18 +-
gnu/services.scm | 45 +-
gnu/services/dbus.scm | 13 +-
gnu/services/desktop.scm | 26 +-
gnu/services/docker.scm | 9 +-
gnu/services/networking.scm | 6 +-
gnu/services/web.scm | 4 +-
gnu/services/xorg.scm | 4 +-
gnu/system.scm | 47 +-
gnu/system/setuid.scm | 57 +
guix/build-system/minify.scm | 4 +-
guix/build/minify-build-system.scm | 2 +-
guix/derivations.scm | 49 +-
guix/import/print.scm | 6 +-
guix/utils.scm | 1 -
100 files changed, 5623 insertions(+), 43937 deletions(-)
delete mode 100644 gnu/packages/aux-files/linux-libre/5.12-arm.conf
delete mode 100644 gnu/packages/aux-files/linux-libre/5.12-arm64.conf
delete mode 100644 gnu/packages/aux-files/linux-libre/5.12-i686.conf
delete mode 100644 gnu/packages/aux-files/linux-libre/5.12-x86_64.conf
create mode 100644 gnu/packages/patches/esmtp-add-lesmtp.patch
create mode 100644 gnu/packages/patches/julia-tracker-16-compat.patch
create mode 100644 gnu/packages/patches/marble-qt-add-qt-headers.patch
create mode 100644 gnu/packages/plan9.scm
copy gnu/packages/{task-runners.scm => uglifyjs.scm} (51%)
create mode 100644 gnu/system/setuid.scm
- branch core-updates-frozen updated (bc55f30 -> b029be2),
guix-commits <=