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01/86: gnu: r-seurat: Update to 4.0.1.
From: |
guix-commits |
Subject: |
01/86: gnu: r-seurat: Update to 4.0.1. |
Date: |
Wed, 7 Apr 2021 21:21:43 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 3118fde135da3c661de8d61f73ebb4f633d096ed
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Wed Apr 7 21:25:06 2021 +0200
gnu: r-seurat: Update to 4.0.1.
* gnu/packages/cran.scm (r-seurat): Update to 4.0.1.
[arguments]: Remove.
[propagated-inputs]: Replace r-spatstat with r-spatstat-core and
r-spatstat-geom.
---
gnu/packages/cran.scm | 19 ++++---------------
1 file changed, 4 insertions(+), 15 deletions(-)
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index 044ad8f..fcde611 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -26484,27 +26484,15 @@ other R users.")
(define-public r-seurat
(package
(name "r-seurat")
- (version "4.0.0")
+ (version "4.0.1")
(source (origin
(method url-fetch)
(uri (cran-uri "Seurat" version))
(sha256
(base32
- "1mp3py00bmzj4541d8ry5sfzkpfzvnl9dpa8n4qhakd13dl30xdn"))))
+ "17cmp9mimvykb8ny796dn1zwmvg0pwwjw1zcixyamc5q1lwnxi3p"))))
(properties `((upstream-name . "Seurat")))
(build-system r-build-system)
- ;; This is needed because r-spatstat has been split up and there has
- ;; been no new release of Seurat since then.
- (arguments
- `(#:phases
- (modify-phases %standard-phases
- (add-after 'unpack 'fix-spatstat-import
- (lambda _
- (substitute* "NAMESPACE"
- (("importFrom\\(spatstat,markvario\\)")
- "importFrom(spatstat.core,markvario)")
- (("importFrom\\(spatstat,ppp\\)")
- "importFrom(spatstat.geom,ppp)")))))))
(propagated-inputs
`(("r-cluster" ,r-cluster)
("r-cowplot" ,r-cowplot)
@@ -26545,7 +26533,8 @@ other R users.")
("r-sctransform" ,r-sctransform)
("r-seuratobject" ,r-seuratobject)
("r-shiny" ,r-shiny)
- ("r-spatstat" ,r-spatstat)
+ ("r-spatstat-core" ,r-spatstat-core)
+ ("r-spatstat-geom" ,r-spatstat-geom)
("r-tibble" ,r-tibble)
("r-uwot" ,r-uwot)))
(home-page "http://www.satijalab.org/seurat")
- branch master updated (2ffd92a -> 83991a3), guix-commits, 2021/04/07
- 01/86: gnu: r-seurat: Update to 4.0.1.,
guix-commits <=
- 02/86: gnu: Add r-workflowsets., guix-commits, 2021/04/07
- 03/86: gnu: r-diffobj: Update to 0.3.4., guix-commits, 2021/04/07
- 06/86: gnu: r-reprex: Update to 2.0.0., guix-commits, 2021/04/07
- 11/86: gnu: r-cli: Update to 2.4.0., guix-commits, 2021/04/07
- 15/86: gnu: r-sapa: Update to 2.0-3., guix-commits, 2021/04/07
- 10/86: gnu: r-vioplot: Update to 0.3.6., guix-commits, 2021/04/07
- 17/86: gnu: r-rastervis: Update to 0.50.1., guix-commits, 2021/04/07
- 21/86: gnu: r-insight: Update to 0.13.2., guix-commits, 2021/04/07
- 29/86: gnu: r-summarytools: Update to 0.9.9., guix-commits, 2021/04/07
- 32/86: gnu: r-gargle: Update to 1.1.0., guix-commits, 2021/04/07