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04/05: gnu: kentutils: Add a file name for the "samtabix" input.


From: guix-commits
Subject: 04/05: gnu: kentutils: Add a file name for the "samtabix" input.
Date: Sun, 20 Dec 2020 10:32:13 -0500 (EST)

mbakke pushed a commit to branch master
in repository guix.

commit ca27b0e528c2a2cee700befe7bd50a2335eed753
Author: Marius Bakke <marius@gnu.org>
AuthorDate: Sun Dec 20 15:53:09 2020 +0100

    gnu: kentutils: Add a file name for the "samtabix" input.
    
    * gnu/packages/bioinformatics.scm (kentutils)[native-inputs]: For 
"samtabix",
    add a file name on the origin.
---
 gnu/packages/bioinformatics.scm | 18 ++++++++++--------
 1 file changed, 10 insertions(+), 8 deletions(-)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 172bb85..255b90e 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -11448,14 +11448,16 @@ models.  TADbit is complemented by TADkit for 
visualizing 3D models.")
              #t)))))
     (native-inputs
      `(("samtabix"
-        ,(origin
-           (method git-fetch)
-           (uri (git-reference
-                 (url "http://genome-source.cse.ucsc.edu/samtabix.git";)
-                 (commit "10fd107909c1ac4d679299908be4262a012965ba")))
-           (sha256
-            (base32
-             "0c1nj64l42v395sa84n7az43xiap4i6f9n9dfz4058aqiwkhkmma"))))))
+        ,(let ((commit "10fd107909c1ac4d679299908be4262a012965ba"))
+           (origin
+             (method git-fetch)
+             (uri (git-reference
+                   (url "http://genome-source.cse.ucsc.edu/samtabix.git";)
+                   (commit commit)))
+             (file-name (git-file-name "samtabix" (string-take commit 7)))
+             (sha256
+              (base32
+               "0c1nj64l42v395sa84n7az43xiap4i6f9n9dfz4058aqiwkhkmma")))))))
     (inputs
      `(("zlib" ,zlib)
        ("tcsh" ,tcsh)



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