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212/323: gnu: r-ncdfflow: Fix r-rhdf5libs link.
From: |
guix-commits |
Subject: |
212/323: gnu: r-ncdfflow: Fix r-rhdf5libs link. |
Date: |
Wed, 9 Dec 2020 06:47:25 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit 0022e9f4c000f2b8054b470a06d75f62b2b8cafb
Author: zimoun <zimon.toutoune@gmail.com>
AuthorDate: Fri Dec 4 03:35:34 2020 +0100
gnu: r-ncdfflow: Fix r-rhdf5libs link.
* gnu/packages/bioconductor.scm (r-ncdfflow): [arguments]: Avoid to have a
plain directory on the list of libraries to link.
Co-authored-by: Ricardo Wurmus <reka@elephly.net>.
---
gnu/packages/bioconductor.scm | 11 +++++++++++
1 file changed, 11 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 2992045..76a82ff 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -6110,6 +6110,17 @@ change point detection.")
"1knqc3ic2vpck7n7m7adxjz3ac70ra89d5gvlgp9r2q3kgaciwac"))))
(properties `((upstream-name . "ncdfFlow")))
(build-system r-build-system)
+ (arguments
+ `(#:phases
+ (modify-phases %standard-phases
+ (add-after 'unpack 'fix-linking
+ (lambda _
+ (substitute* "src/Makevars"
+ ;; This is to avoid having a plain directory on the list of
+ ;; libraries to link.
+ (("\\(RHDF5_LIBS\\)" match)
+ (string-append match "/libhdf5.a")))
+ #t)))))
(inputs
`(("zlib" ,zlib)))
(propagated-inputs
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- 212/323: gnu: r-ncdfflow: Fix r-rhdf5libs link.,
guix-commits <=
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