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304/323: gnu: r-scater: Update to 1.18.3.
From: |
guix-commits |
Subject: |
304/323: gnu: r-scater: Update to 1.18.3. |
Date: |
Mon, 7 Dec 2020 15:14:24 -0500 (EST) |
rekado pushed a commit to branch wip-r
in repository guix.
commit bdb218b2a9622fbc15cd8d3e327199a24b92edfd
Author: zimoun <zimon.toutoune@gmail.com>
AuthorDate: Fri Oct 30 15:57:27 2020 +0100
gnu: r-scater: Update to 1.18.3.
* gnu/packages/bioconductor.scm (r-scater): Update to 1.18.3.
[propagated-inputs]: Add r-gridextra, r-scutlle. Remove r-beachmat, r-rcpp.
Co-authored-by: Ricardo Wurmus <reka@elephly.net>.
---
gnu/packages/bioconductor.scm | 10 +++++-----
1 file changed, 5 insertions(+), 5 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 3572b60..5b10bfd 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -8874,17 +8874,16 @@ of other packages.")
(define-public r-scater
(package
(name "r-scater")
- (version "1.16.2")
+ (version "1.18.3")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "scater" version))
(sha256
(base32
- "1pa5wvgjb30rw1vsjwbnn07ss3sc5n8ck5d7khdby4r2s9177s33"))))
+ "14f7yw277nykxmcm7wlhlsf3nizpwzz24hax1icx73lavfxmc535"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-beachmat" ,r-beachmat)
- ("r-biocgenerics" ,r-biocgenerics)
+ `(("r-biocgenerics" ,r-biocgenerics)
("r-biocneighbors" ,r-biocneighbors)
("r-biocparallel" ,r-biocparallel)
("r-biocsingular" ,r-biocsingular)
@@ -8892,10 +8891,11 @@ of other packages.")
("r-delayedmatrixstats" ,r-delayedmatrixstats)
("r-ggbeeswarm" ,r-ggbeeswarm)
("r-ggplot2" ,r-ggplot2)
+ ("r-gridextra" ,r-gridextra)
("r-matrix" ,r-matrix)
- ("r-rcpp" ,r-rcpp)
("r-rlang" ,r-rlang)
("r-s4vectors" ,r-s4vectors)
+ ("r-scuttle" ,r-scuttle)
("r-singlecellexperiment" ,r-singlecellexperiment)
("r-summarizedexperiment" ,r-summarizedexperiment)
("r-viridis" ,r-viridis)))
- 306/323: gnu: r-biocviews: Update to 1.58.1., (continued)
- 306/323: gnu: r-biocviews: Update to 1.58.1., guix-commits, 2020/12/07
- 312/323: gnu: r-minfi: Update to 1.36.0., guix-commits, 2020/12/07
- 257/323: gnu: r-copywriter: Update to 2.22.0., guix-commits, 2020/12/07
- 273/323: gnu: r-interactivedisplaybase: Update to 1.28.0., guix-commits, 2020/12/07
- 281/323: gnu: r-ensembldb: Update to 2.14.0., guix-commits, 2020/12/07
- 289/323: gnu: r-gwascat: Update to 2.22.0., guix-commits, 2020/12/07
- 288/323: gnu: r-gviz: Update to 1.34.0., guix-commits, 2020/12/07
- 290/323: gnu: r-sushi: Update to 1.28.0., guix-commits, 2020/12/07
- 292/323: gnu: Add r-bluster., guix-commits, 2020/12/07
- 295/323: gnu: r-interactionset: Update to 1.18.0., guix-commits, 2020/12/07
- 304/323: gnu: r-scater: Update to 1.18.3.,
guix-commits <=
- 310/323: gnu: r-ggcyto: Update to 1.18.0., guix-commits, 2020/12/07
- 314/323: gnu: r-lumi: Update to 2.42.0., guix-commits, 2020/12/07
- 315/323: gnu: r-quantro: Update to 1.24.0., guix-commits, 2020/12/07
- 322/323: gnu: r-rhtslib: Propagate zlib., guix-commits, 2020/12/07
- 323/323: gnu: r-diffbind: Update to 3.0.8., guix-commits, 2020/12/07