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304/323: gnu: r-scater: Update to 1.18.3.


From: guix-commits
Subject: 304/323: gnu: r-scater: Update to 1.18.3.
Date: Mon, 7 Dec 2020 15:14:24 -0500 (EST)

rekado pushed a commit to branch wip-r
in repository guix.

commit bdb218b2a9622fbc15cd8d3e327199a24b92edfd
Author: zimoun <zimon.toutoune@gmail.com>
AuthorDate: Fri Oct 30 15:57:27 2020 +0100

    gnu: r-scater: Update to 1.18.3.
    
    * gnu/packages/bioconductor.scm (r-scater): Update to 1.18.3.
    [propagated-inputs]: Add r-gridextra, r-scutlle.  Remove r-beachmat, r-rcpp.
    
    Co-authored-by: Ricardo Wurmus <reka@elephly.net>.
---
 gnu/packages/bioconductor.scm | 10 +++++-----
 1 file changed, 5 insertions(+), 5 deletions(-)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 3572b60..5b10bfd 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -8874,17 +8874,16 @@ of other packages.")
 (define-public r-scater
   (package
     (name "r-scater")
-    (version "1.16.2")
+    (version "1.18.3")
     (source (origin
               (method url-fetch)
               (uri (bioconductor-uri "scater" version))
               (sha256
                (base32
-                "1pa5wvgjb30rw1vsjwbnn07ss3sc5n8ck5d7khdby4r2s9177s33"))))
+                "14f7yw277nykxmcm7wlhlsf3nizpwzz24hax1icx73lavfxmc535"))))
     (build-system r-build-system)
     (propagated-inputs
-     `(("r-beachmat" ,r-beachmat)
-       ("r-biocgenerics" ,r-biocgenerics)
+     `(("r-biocgenerics" ,r-biocgenerics)
        ("r-biocneighbors" ,r-biocneighbors)
        ("r-biocparallel" ,r-biocparallel)
        ("r-biocsingular" ,r-biocsingular)
@@ -8892,10 +8891,11 @@ of other packages.")
        ("r-delayedmatrixstats" ,r-delayedmatrixstats)
        ("r-ggbeeswarm" ,r-ggbeeswarm)
        ("r-ggplot2" ,r-ggplot2)
+       ("r-gridextra" ,r-gridextra)
        ("r-matrix" ,r-matrix)
-       ("r-rcpp" ,r-rcpp)
        ("r-rlang" ,r-rlang)
        ("r-s4vectors" ,r-s4vectors)
+       ("r-scuttle" ,r-scuttle)
        ("r-singlecellexperiment" ,r-singlecellexperiment)
        ("r-summarizedexperiment" ,r-summarizedexperiment)
        ("r-viridis" ,r-viridis)))



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