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222/323: gnu: r-shortread: Update to 1.48.0.
From: |
guix-commits |
Subject: |
222/323: gnu: r-shortread: Update to 1.48.0. |
Date: |
Mon, 7 Dec 2020 15:13:54 -0500 (EST) |
rekado pushed a commit to branch wip-r
in repository guix.
commit c18fd4dbd5868d3a1eb513be1ccf3afa4c62c522
Author: zimoun <zimon.toutoune@gmail.com>
AuthorDate: Fri Oct 30 15:58:01 2020 +0100
gnu: r-shortread: Update to 1.48.0.
* gnu/packages/bioinformatics.scm (r-shortread): Update to 1.48.0.
---
gnu/packages/bioinformatics.scm | 5 +++--
1 file changed, 3 insertions(+), 2 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 29d6d98..82adc47 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -7399,14 +7399,14 @@ testing and other simple calculations.")
(define-public r-shortread
(package
(name "r-shortread")
- (version "1.46.0")
+ (version "1.48.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "ShortRead" version))
(sha256
(base32
- "0l4kdln69y6yhln0xiv2jmpxg05fjcglln406p43a2bqvk2lr03d"))))
+ "0w4m8d3h660mmr2ymp206r1n4aqssxmkv8yxkbr5y1swrahxzfk9"))))
(properties `((upstream-name . "ShortRead")))
(build-system r-build-system)
(inputs
@@ -7419,6 +7419,7 @@ testing and other simple calculations.")
("r-genomeinfodb" ,r-genomeinfodb)
("r-genomicalignments" ,r-genomicalignments)
("r-genomicranges" ,r-genomicranges)
+ ("r-rhtslib" ,r-rhtslib)
("r-hwriter" ,r-hwriter)
("r-iranges" ,r-iranges)
("r-lattice" ,r-lattice)
- 298/323: gnu: r-yapsa: Update to 1.16.0., (continued)
- 298/323: gnu: r-yapsa: Update to 1.16.0., guix-commits, 2020/12/07
- 302/323: gnu: r-delayedmatrixstats: Update to 1.12.0., guix-commits, 2020/12/07
- 317/323: gnu: r-watermelon: Update to 1.34.0., guix-commits, 2020/12/07
- 318/323: gnu: r-bigmelon: Update to 1.16.0., guix-commits, 2020/12/07
- 319/323: gnu: r-gqtlbase: Update to 1.21.1., guix-commits, 2020/12/07
- 321/323: gnu: r-delayedmatrixstats: Update to 1.12.1., guix-commits, 2020/12/07
- 208/323: gnu: r-cytolib: Fix r-rhdf5libs linking., guix-commits, 2020/12/07
- 215/323: gnu: r-deseq2: Update to 1.30.0., guix-commits, 2020/12/07
- 219/323: gnu: r-gseabase: Update to 1.52.0., guix-commits, 2020/12/07
- 220/323: gnu: r-category: Update to 2.56.0., guix-commits, 2020/12/07
- 222/323: gnu: r-shortread: Update to 1.48.0.,
guix-commits <=
- 223/323: gnu: r-systempiper: Update to 1.24.2., guix-commits, 2020/12/07
- 224/323: gnu: r-grohmm: Update to 1.24.0., guix-commits, 2020/12/07
- 232/323: gnu: r-biobase: Update to 2.50.0., guix-commits, 2020/12/07
- 245/323: gnu: r-impute: Update to 1.64.0., guix-commits, 2020/12/07
- 316/323: gnu: r-yarn: Update to 1.16.0., guix-commits, 2020/12/07
- 246/323: gnu: r-seqpattern: Update to 1.22.0., guix-commits, 2020/12/07
- 267/323: gnu: r-pcamethods: Update to 1.82.0., guix-commits, 2020/12/07
- 256/323: gnu: r-chipseq: Update to 1.40.0., guix-commits, 2020/12/07
- 286/323: gnu: r-erma: Update to 1.6.0., guix-commits, 2020/12/07
- 291/323: gnu: r-annaffy: Update to 1.62.0., guix-commits, 2020/12/07