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40/323: gnu: r-glimma: Update to 2.0.0.


From: guix-commits
Subject: 40/323: gnu: r-glimma: Update to 2.0.0.
Date: Mon, 7 Dec 2020 15:12:48 -0500 (EST)

rekado pushed a commit to branch wip-r
in repository guix.

commit a4b99d52917949f9bb24822bed79092fc71e026b
Author: zimoun <zimon.toutoune@gmail.com>
AuthorDate: Fri Oct 30 15:48:42 2020 +0100

    gnu: r-glimma: Update to 2.0.0.
    
    * gnu/packages/bioconductor.scm (r-glimma): Update to 2.0.0.
---
 gnu/packages/bioconductor.scm | 12 ++++++++----
 1 file changed, 8 insertions(+), 4 deletions(-)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 81c0f07..16ab91c 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -2300,20 +2300,24 @@ defined categories which are over/under represented in 
RNA-seq data.")
 (define-public r-glimma
   (package
     (name "r-glimma")
-    (version "1.16.0")
+    (version "2.0.0")
     (source
      (origin
        (method url-fetch)
        (uri (bioconductor-uri "Glimma" version))
        (sha256
         (base32
-         "1bxfgwjqb9p400a5a5q6p17kcnl3ddz090llihkfih9kyxii9n4y"))))
+         "0gy30v30lw27frhmw39pzacqzrv2vwj5rsp6gb3yifllrahdiffv"))))
     (properties `((upstream-name . "Glimma")))
     (build-system r-build-system)
     (propagated-inputs
-     `(("r-edger" ,r-edger)
+     `(("r-deseq2" ,r-deseq2)
+       ("r-edger" ,r-edger)
+       ("r-htmlwidgets" ,r-htmlwidgets)
        ("r-jsonlite" ,r-jsonlite)
-       ("r-s4vectors" ,r-s4vectors)))
+       ("r-limma" ,r-limma)
+       ("r-s4vectors" ,r-s4vectors)
+       ("r-summarizedexperiment" ,r-summarizedexperiment)))
     (native-inputs
      `(("r-knitr" ,r-knitr)))
     (home-page "https://github.com/Shians/Glimma";)



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