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143/323: gnu: r-flowworkspace: Update to 4.2.0.
From: |
guix-commits |
Subject: |
143/323: gnu: r-flowworkspace: Update to 4.2.0. |
Date: |
Mon, 7 Dec 2020 15:13:25 -0500 (EST) |
rekado pushed a commit to branch wip-r
in repository guix.
commit 230be052ef4230ca67c1a650d157d3cad17a4208
Author: zimoun <zimon.toutoune@gmail.com>
AuthorDate: Fri Oct 30 15:54:17 2020 +0100
gnu: r-flowworkspace: Update to 4.2.0.
* gnu/packages/bioconductor.scm (r-flowworkspace): Update to 4.2.0.
[inputs]: Add zlib.
[propagated-inputs]: Add r-aws-s3 and r-aws-signature. Remove r-stringr.
---
gnu/packages/bioconductor.scm | 11 +++++++----
1 file changed, 7 insertions(+), 4 deletions(-)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 300229d..73acf40 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -6233,18 +6233,22 @@ for other R packages to compile and link against.")
(define-public r-flowworkspace
(package
(name "r-flowworkspace")
- (version "4.0.6")
+ (version "4.2.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "flowWorkspace" version))
(sha256
(base32
- "123ny8n3jjgmsnpghk1dafxkwmcyr513gxi8y4h4qszq4s6ai15v"))))
+ "19svh32jq1dpq3ayhpd5r8bw0iax8d9kdvpvc23gx2pf16g1j5ag"))))
(properties `((upstream-name . "flowWorkspace")))
(build-system r-build-system)
+ (inputs
+ `(("zlib" ,zlib)))
(propagated-inputs
- `(("r-bh" ,r-bh)
+ `(("r-aws-s3" ,r-aws-s3)
+ ("r-aws-signature" ,r-aws-signature)
+ ("r-bh" ,r-bh)
("r-biobase" ,r-biobase)
("r-biocgenerics" ,r-biocgenerics)
("r-cytolib" ,r-cytolib)
@@ -6266,7 +6270,6 @@ for other R packages to compile and link against.")
("r-rhdf5lib" ,r-rhdf5lib)
("r-rprotobuflib" ,r-rprotobuflib)
("r-scales" ,r-scales)
- ("r-stringr" ,r-stringr)
("r-xml" ,r-xml)))
(native-inputs
`(("r-knitr" ,r-knitr)))
- 117/323: gnu: r-progeny: Update to 1.12.0., (continued)
- 117/323: gnu: r-progeny: Update to 1.12.0., guix-commits, 2020/12/07
- 119/323: gnu: r-biocfilecache: Update to 1.14.0., guix-commits, 2020/12/07
- 10/323: gnu: r-affycoretools: Update to 1.62.0., guix-commits, 2020/12/07
- 72/323: gnu: r-fgsea: Update to 1.16.0., guix-commits, 2020/12/07
- 84/323: gnu: r-abseqr: Update to 1.8.0., guix-commits, 2020/12/07
- 67/323: gnu: r-varianttools: Update to 1.32.0., guix-commits, 2020/12/07
- 124/323: gnu: r-quasr: Update to 1.30.0., guix-commits, 2020/12/07
- 138/323: gnu: r-flowviz: Update to 1.54.0., guix-commits, 2020/12/07
- 139/323: gnu: r-flowclust: Update to 3.28.0., guix-commits, 2020/12/07
- 142/323: gnu: Add r-aws-s3., guix-commits, 2020/12/07
- 143/323: gnu: r-flowworkspace: Update to 4.2.0.,
guix-commits <=
- 145/323: gnu: r-opencyto: Update to 2.2.0., guix-commits, 2020/12/07
- 146/323: gnu: r-cytoml: Update to 2.2.1., guix-commits, 2020/12/07
- 166/323: gnu: r-bicare: Update to 1.48.0., guix-commits, 2020/12/07
- 159/323: gnu: r-variantfiltering: Update to 1.26.0., guix-commits, 2020/12/07
- 172/323: gnu: r-bigmemoryextras: Update to 1.38.0., guix-commits, 2020/12/07
- 184/323: gnu: r-bioconcotk: Update to 1.10.0., guix-commits, 2020/12/07
- 197/323: gnu: r-xvector: Update to 0.30.0., guix-commits, 2020/12/07
- 202/323: gnu: Add r-ggalluvial., guix-commits, 2020/12/07
- 216/323: gnu: r-dexseq: Update to 1.36.0., guix-commits, 2020/12/07
- 227/323: gnu: r-bioccheck: Update to 1.26.0., guix-commits, 2020/12/07