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branch master updated: gnu: Fix build for python-pysam.


From: guix-commits
Subject: branch master updated: gnu: Fix build for python-pysam.
Date: Fri, 13 Nov 2020 10:17:38 -0500

This is an automated email from the git hooks/post-receive script.

roelj pushed a commit to branch master
in repository guix.

The following commit(s) were added to refs/heads/master by this push:
     new 37ba374  gnu: Fix build for python-pysam.
37ba374 is described below

commit 37ba374a536453078a5ba9e81815902b256884c0
Author: Roel Janssen <roel@gnu.org>
AuthorDate: Fri Nov 13 16:16:43 2020 +0100

    gnu: Fix build for python-pysam.
    
    * gnu/packages/bioinformatics.scm (python-pysam): Use htslib-1.9,
      samtools-1.9, and bcftools-1.9.
---
 gnu/packages/bioinformatics.scm | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 22da6ac..15230a8 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -1986,7 +1986,7 @@ multiple sequence alignments.")
      `(("python-cython" ,python-cython)
        ;; Dependencies below are are for tests only.
        ("samtools" ,samtools-1.9)
-       ("bcftools" ,bcftools)
+       ("bcftools" ,bcftools-1.9)
        ("python-nose" ,python-nose)))
     (home-page "https://github.com/pysam-developers/pysam";)
     (synopsis "Python bindings to the SAMtools C API")



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