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08/16: gnu: r-maldiquant: Move to (gnu packages cran).


From: guix-commits
Subject: 08/16: gnu: r-maldiquant: Move to (gnu packages cran).
Date: Fri, 11 Sep 2020 16:04:29 -0400 (EDT)

rekado pushed a commit to branch master
in repository guix.

commit b31c364467470a7d4f7eb46fb2c5ca13c9ec2121
Author: zimoun <zimon.toutoune@gmail.com>
AuthorDate: Fri Sep 11 20:08:45 2020 +0200

    gnu: r-maldiquant: Move to (gnu packages cran).
    
    * gnu/packages/bioinformatics.scm (r-maldiquant): Move from here...
    * gnu/packages/cran.scm (r-maldiquant): ...to here.
    
    Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
---
 gnu/packages/bioinformatics.scm | 26 --------------------------
 gnu/packages/cran.scm           | 26 ++++++++++++++++++++++++++
 2 files changed, 26 insertions(+), 26 deletions(-)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 40c6363..fecb3c0 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -9425,32 +9425,6 @@ for analyzing gene-level association tests in 
meta-analyses for binary
 trait.")
     (license license:gpl3)))
 
-(define-public r-maldiquant
-  (package
-    (name "r-maldiquant")
-    (version "1.19.3")
-    (source
-     (origin
-       (method url-fetch)
-       (uri (cran-uri "MALDIquant" version))
-       (sha256
-        (base32
-         "0b7kdz3x4sdq413h1q09l1qhcvdnnwv6fqsqwllks1cd3xy34c57"))))
-    (properties `((upstream-name . "MALDIquant")))
-    (build-system r-build-system)
-    (home-page "https://cran.r-project.org/web/packages/MALDIquant";)
-    (synopsis "Quantitative analysis of mass spectrometry data")
-    (description
-     "This package provides a complete analysis pipeline for matrix-assisted
-laser desorption/ionization-time-of-flight (MALDI-TOF) and other
-two-dimensional mass spectrometry data.  In addition to commonly used plotting
-and processing methods it includes distinctive features, namely baseline
-subtraction methods such as morphological filters (TopHat) or the
-statistics-sensitive non-linear iterative peak-clipping algorithm (SNIP), peak
-alignment using warping functions, handling of replicated measurements as well
-as allowing spectra with different resolutions.")
-    (license license:gpl3+)))
-
 (define-public r-protgenerics
   (package
     (name "r-protgenerics")
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index fec9947..3657ae1 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -24405,3 +24405,29 @@ designs.  Broman et al. (2018) 
<doi:10.1534/genetics.118.301595>.")
 data (variant call format, e.g. VCF or BCF) or meta-analysis results in R.")
     ;; Any version of the GPL is acceptable
     (license (list license:gpl2+ license:gpl3+))))
+
+(define-public r-maldiquant
+  (package
+    (name "r-maldiquant")
+    (version "1.19.3")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (cran-uri "MALDIquant" version))
+       (sha256
+        (base32
+         "0b7kdz3x4sdq413h1q09l1qhcvdnnwv6fqsqwllks1cd3xy34c57"))))
+    (properties `((upstream-name . "MALDIquant")))
+    (build-system r-build-system)
+    (home-page "https://cran.r-project.org/web/packages/MALDIquant";)
+    (synopsis "Quantitative analysis of mass spectrometry data")
+    (description
+     "This package provides a complete analysis pipeline for matrix-assisted
+laser desorption/ionization-time-of-flight (MALDI-TOF) and other
+two-dimensional mass spectrometry data.  In addition to commonly used plotting
+and processing methods it includes distinctive features, namely baseline
+subtraction methods such as morphological filters (TopHat) or the
+statistics-sensitive non-linear iterative peak-clipping algorithm (SNIP), peak
+alignment using warping functions, handling of replicated measurements as well
+as allowing spectra with different resolutions.")
+    (license license:gpl3+)))



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