[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]
05/05: gnu: Add r-fhtest.
From: |
guix-commits |
Subject: |
05/05: gnu: Add r-fhtest. |
Date: |
Fri, 11 Sep 2020 15:34:32 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 7e88ee9f02776f9eafdf23eeaffa7f0f6aefc721
Author: Peter Lo <peterloleungyau@gmail.com>
AuthorDate: Fri Sep 11 21:01:53 2020 +0200
gnu: Add r-fhtest.
* gnu/packages/bioconductor.scm (r-fhtest): New variable.
Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
---
gnu/packages/bioconductor.scm | 36 ++++++++++++++++++++++++++++++++++++
1 file changed, 36 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 9f770b3..633cd2b 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -8204,3 +8204,39 @@ truncated data.")
"This package provides functions to fit nonparametric survival curves,
plot them, and perform logrank or Wilcoxon type tests.")
(license license:gpl2+)))
+
+;; This is a CRAN package, but it depends on r-interval, which depends on a
+;; Bioconductor package.
+(define-public r-fhtest
+ (package
+ (name "r-fhtest")
+ (version "1.4")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "FHtest" version))
+ (sha256
+ (base32
+ "1wsn0j9ydpp9nfswiqg21p09kgkvaq8fh0y0h8syqgizah7i8vs2"))))
+ (properties `((upstream-name . "FHtest")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-interval" ,r-interval)
+ ("r-kmsurv" ,r-kmsurv)
+ ("r-mass" ,r-mass)
+ ("r-perm" ,r-perm)
+ ("r-survival" ,r-survival)))
+ (home-page "https://cran.r-project.org/web/packages/FHtest/")
+ (synopsis "Tests for survival data based on the Fleming-Harrington class")
+ (description
+ "This package provides functions to compare two or more survival curves
+with:
+
+@itemize
+@item The Fleming-Harrington test for right-censored data based on
+ permutations and on counting processes.
+@item An extension of the Fleming-Harrington test for interval-censored data
+ based on a permutation distribution and on a score vector distribution.
+@end itemize
+")
+ (license license:gpl2+)))