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02/296: guix: Update to Bioconductor 3.11.
From: |
guix-commits |
Subject: |
02/296: guix: Update to Bioconductor 3.11. |
Date: |
Fri, 12 Jun 2020 19:29:20 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 8e518d4802891ea8398aab7259f823c3cc648d64
Author: Ricardo Wurmus <rekado@elephly.net>
AuthorDate: Fri Jun 12 15:49:57 2020 +0200
guix: Update to Bioconductor 3.11.
* guix/build-system/r.scm (bioconductor-uri): Use new URL.
* guix/import/cran.scm (%bioconductor-version): Update to 3.11.
---
guix/build-system/r.scm | 4 ++--
guix/import/cran.scm | 4 ++--
2 files changed, 4 insertions(+), 4 deletions(-)
diff --git a/guix/build-system/r.scm b/guix/build-system/r.scm
index 2d32876..c8ec9ab 100644
--- a/guix/build-system/r.scm
+++ b/guix/build-system/r.scm
@@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2015, 2017, 2018 Ricardo Wurmus <rekado@elephly.net>
+;;; Copyright © 2015, 2017, 2018, 2019, 2020 Ricardo Wurmus
<rekado@elephly.net>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -59,7 +59,7 @@ release corresponding to NAME and VERSION."
"/src/contrib/"
name "_" version ".tar.gz")
;; TODO: use %bioconductor-version from (guix import cran)
- (string-append "https://bioconductor.org/packages/3.10"
+ (string-append "https://bioconductor.org/packages/3.11"
type-url-part
"/src/contrib/Archive/"
name "_" version ".tar.gz"))))
diff --git a/guix/import/cran.scm b/guix/import/cran.scm
index ad66a64..b822fbc 100644
--- a/guix/import/cran.scm
+++ b/guix/import/cran.scm
@@ -141,9 +141,9 @@ package definition."
(define %cran-url "https://cran.r-project.org/web/packages/")
(define %bioconductor-url "https://bioconductor.org/packages/")
-;; The latest Bioconductor release is 3.10. Bioconductor packages should be
+;; The latest Bioconductor release is 3.11. Bioconductor packages should be
;; updated together.
-(define %bioconductor-version "3.10")
+(define %bioconductor-version "3.11")
(define* (bioconductor-packages-list-url #:optional type)
(string-append "https://bioconductor.org/packages/"
- branch master updated (db6290a -> 9ae4bd0), guix-commits, 2020/06/12
- 01/296: gnu: r-gprofiler: Move to (gnu packages cran)., guix-commits, 2020/06/12
- 02/296: guix: Update to Bioconductor 3.11.,
guix-commits <=
- 04/296: gnu: Add r-gprofiler2., guix-commits, 2020/06/12
- 05/296: gnu: Add r-scatterpie., guix-commits, 2020/06/12
- 06/296: gnu: Add r-v8., guix-commits, 2020/06/12
- 03/296: gnu: node: Build shared library., guix-commits, 2020/06/12
- 07/296: gnu: Add r-dot., guix-commits, 2020/06/12
- 10/296: gnu: r-genefilter: Update to 1.70.0., guix-commits, 2020/06/12
- 08/296: gnu: r-preprocesscore: Update to 1.50.0., guix-commits, 2020/06/12
- 09/296: gnu: r-rgraphviz: Update to 2.32.0., guix-commits, 2020/06/12
- 15/296: gnu: r-gseabase: Update to 1.50.1., guix-commits, 2020/06/12
- 17/296: gnu: r-gostats: Update to 2.54.0., guix-commits, 2020/06/12