15/20: gnu: Add r-biggr.

[guix-commits]

rekado pushed a commit to branch master
in repository guix.

commit 6ca6f8663b1d7b5d0e6c8f33bd9420d1ade832db
Author: Ricardo Wurmus <address@hidden>
Date:   Tue Dec 17 19:48:13 2019 +0100

    gnu: Add r-biggr.
    
    * gnu/packages/bioconductor.scm (r-biggr): New variable.
---
 gnu/packages/bioconductor.scm | 30 ++++++++++++++++++++++++++++++
 1 file changed, 30 insertions(+)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index f506bb4..f388f16 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -6753,3 +6753,33 @@ manipulating hypergraphs.")
     (description
      "This package provides functions for visualizing hypergraphs.")
     (license license:gpl2+)))
+
+(define-public r-biggr
+  (package
+    (name "r-biggr")
+    (version "1.22.0")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (bioconductor-uri "BiGGR" version))
+       (sha256
+        (base32
+         "1n2ypc84abmhn6br0yi87k7lvjc11k7abzhgvzdabc2ai1qgcqif"))))
+    (properties `((upstream-name . "BiGGR")))
+    (build-system r-build-system)
+    (propagated-inputs
+     `(("r-hyperdraw" ,r-hyperdraw)
+       ("r-hypergraph" ,r-hypergraph)
+       ("r-lim" ,r-lim)
+       ("r-limsolve" ,r-limsolve)
+       ("r-rsbml" ,r-rsbml)
+       ("r-stringr" ,r-stringr)))
+    (home-page "https://bioconductor.org/packages/BiGGR/";)
+    (synopsis "Constraint based modeling using metabolic reconstruction 
databases")
+    (description
+     "This package provides an interface to simulate metabolic reconstruction
+from the @url{http://bigg.ucsd.edu/, BiGG database} and other metabolic
+reconstruction databases.  The package facilitates @dfn{flux balance
+analysis} (FBA) and the sampling of feasible flux distributions.  Metabolic
+networks and estimated fluxes can be visualized with hypergraphs.")
+    (license license:gpl3+)))