44/47: gnu: r-seurat: Update to 3.1.0.

[guix-commits]

rekado pushed a commit to branch master
in repository guix.

commit 32fcd898f0e73b34dd8f11af952b87707e461f7a
Author: Ricardo Wurmus <address@hidden>
Date:   Mon Sep 2 14:39:11 2019 +0200

    gnu: r-seurat: Update to 3.1.0.
    
    * gnu/packages/bioinformatics.scm (r-seurat): Update to 3.1.0.
    [propagated-inputs]: Add r-leiden, r-rcppannoy, and r-uwot.
---
 gnu/packages/bioinformatics.scm | 9 ++++++---
 1 file changed, 6 insertions(+), 3 deletions(-)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 7d6d5e8..2c6648b 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -9457,13 +9457,13 @@ and irregular enzymatic cleavages, mass measurement 
accuracy, etc.")
 (define-public r-seurat
   (package
     (name "r-seurat")
-    (version "3.0.2")
+    (version "3.1.0")
     (source (origin
               (method url-fetch)
               (uri (cran-uri "Seurat" version))
               (sha256
                (base32
-                "016fgcmjz3sjfxdvam5hd7mdxpmpnc7f6p5zqlh97m21dgn5vpqn"))))
+                "0icxndnnkkmmr9hhd01dv3w8pih7x9r0rlp3fq9pk3qajp9gmlyq"))))
     (properties `((upstream-name . "Seurat")))
     (build-system r-build-system)
     (propagated-inputs
@@ -9480,6 +9480,7 @@ and irregular enzymatic cleavages, mass measurement 
accuracy, etc.")
        ("r-igraph" ,r-igraph)
        ("r-irlba" ,r-irlba)
        ("r-kernsmooth" ,r-kernsmooth)
+       ("r-leiden" ,r-leiden)
        ("r-lmtest" ,r-lmtest)
        ("r-mass" ,r-mass)
        ("r-matrix" ,r-matrix)
@@ -9490,6 +9491,7 @@ and irregular enzymatic cleavages, mass measurement 
accuracy, etc.")
        ("r-rann" ,r-rann)
        ("r-rcolorbrewer" ,r-rcolorbrewer)
        ("r-rcpp" ,r-rcpp)
+       ("r-rcppannoy" ,r-rcppannoy)
        ("r-rcppeigen" ,r-rcppeigen)
        ("r-rcppprogress" ,r-rcppprogress)
        ("r-reticulate" ,r-reticulate)
@@ -9500,7 +9502,8 @@ and irregular enzymatic cleavages, mass measurement 
accuracy, etc.")
        ("r-scales" ,r-scales)
        ("r-sctransform" ,r-sctransform)
        ("r-sdmtools" ,r-sdmtools)
-       ("r-tsne" ,r-tsne)))
+       ("r-tsne" ,r-tsne)
+       ("r-uwot" ,r-uwot)))
     (home-page "http://www.satijalab.org/seurat";)
     (synopsis "Seurat is an R toolkit for single cell genomics")
     (description