[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]
11/15: gnu: r-acsnminer: Move to (gnu packages cran).
From: |
guix-commits |
Subject: |
11/15: gnu: r-acsnminer: Move to (gnu packages cran). |
Date: |
Sun, 24 Mar 2019 18:44:25 -0400 (EDT) |
rekado pushed a commit to branch master
in repository guix.
commit 49a48c496f04d018f233bd5efc8b8ee11cd83cc9
Author: Ricardo Wurmus <address@hidden>
Date: Sun Mar 24 23:36:10 2019 +0100
gnu: r-acsnminer: Move to (gnu packages cran).
* gnu/packages/bioinformatics.scm (r-acsnminer): Move from here...
* gnu/packages/cran.scm (r-acsnminer): ...to here.
---
gnu/packages/bioinformatics.scm | 26 --------------------------
gnu/packages/cran.scm | 26 ++++++++++++++++++++++++++
2 files changed, 26 insertions(+), 26 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index a129c48..807f5c8 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -7243,32 +7243,6 @@ BLAST, KEGG, GenBank, MEDLINE and GO.")
;; (LGPLv2.1+) and scripts in samples (which have GPL2 and GPL2+)
(license (list license:ruby license:lgpl2.1+ license:gpl2+ ))))
-(define-public r-acsnminer
- (package
- (name "r-acsnminer")
- (version "0.16.8.25")
- (source (origin
- (method url-fetch)
- (uri (cran-uri "ACSNMineR" version))
- (sha256
- (base32
- "0gh604s8qall6zfjlwcg2ilxjvz08dplf9k5g47idhv43scm748l"))))
- (properties `((upstream-name . "ACSNMineR")))
- (build-system r-build-system)
- (propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
- ("r-gridextra" ,r-gridextra)))
- (home-page "https://cran.r-project.org/web/packages/ACSNMineR")
- (synopsis "Gene enrichment analysis")
- (description
- "This package provides tools to compute and represent gene set enrichment
-or depletion from your data based on pre-saved maps from the @dfn{Atlas of
-Cancer Signalling Networks} (ACSN) or user imported maps. The gene set
-enrichment can be run with hypergeometric test or Fisher exact test, and can
-use multiple corrections. Visualization of data can be done either by
-barplots or heatmaps.")
- (license license:gpl2+)))
-
(define-public r-biocinstaller
(package
(name "r-biocinstaller")
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index ba966ff..22355c3 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -12023,6 +12023,32 @@ statistics, with applications to
@dfn{single-nucleotide polymorphism} (SNP)
data.")
(license license:gpl2+)))
+(define-public r-acsnminer
+ (package
+ (name "r-acsnminer")
+ (version "0.16.8.25")
+ (source (origin
+ (method url-fetch)
+ (uri (cran-uri "ACSNMineR" version))
+ (sha256
+ (base32
+ "0gh604s8qall6zfjlwcg2ilxjvz08dplf9k5g47idhv43scm748l"))))
+ (properties `((upstream-name . "ACSNMineR")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-ggplot2" ,r-ggplot2)
+ ("r-gridextra" ,r-gridextra)))
+ (home-page "https://cran.r-project.org/web/packages/ACSNMineR")
+ (synopsis "Gene enrichment analysis")
+ (description
+ "This package provides tools to compute and represent gene set enrichment
+or depletion from your data based on pre-saved maps from the @dfn{Atlas of
+Cancer Signalling Networks} (ACSN) or user imported maps. The gene set
+enrichment can be run with hypergeometric test or Fisher exact test, and can
+use multiple corrections. Visualization of data can be done either by
+barplots or heatmaps.")
+ (license license:gpl2+)))
+
(define-public r-units
(package
(name "r-units")
- 04/15: gnu: Add r-units., (continued)
- 04/15: gnu: Add r-units., guix-commits, 2019/03/24
- 10/15: gnu: Add r-spdep., guix-commits, 2019/03/24
- 07/15: gnu: Add r-learnbayes., guix-commits, 2019/03/24
- 13/15: gnu: Add r-adegenet., guix-commits, 2019/03/24
- 03/15: gnu: Add udunits., guix-commits, 2019/03/24
- 08/15: gnu: Add r-deldir., guix-commits, 2019/03/24
- 05/15: gnu: Add r-classint., guix-commits, 2019/03/24
- 06/15: gnu: Add r-spdata., guix-commits, 2019/03/24
- 15/15: gnu: Add r-rmetasim., guix-commits, 2019/03/24
- 12/15: gnu: r-seqinr: Move to (gnu packages cran)., guix-commits, 2019/03/24
- 11/15: gnu: r-acsnminer: Move to (gnu packages cran).,
guix-commits <=
- 09/15: gnu: Add r-sf., guix-commits, 2019/03/24
- 14/15: gnu: Add r-pegas., guix-commits, 2019/03/24