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52/89: gnu: r-genomation: Update to 1.10.0.
From: |
Ricardo Wurmus |
Subject: |
52/89: gnu: r-genomation: Update to 1.10.0. |
Date: |
Tue, 7 Nov 2017 02:44:57 -0500 (EST) |
rekado pushed a commit to branch master
in repository guix.
commit e127c918f857483c28d2a00d7dc78ac887e2d61a
Author: Ricardo Wurmus <address@hidden>
Date: Mon Nov 6 21:41:40 2017 +0100
gnu: r-genomation: Update to 1.10.0.
* gnu/packages/bioinformatics.scm (r-genomation): Update to 1.10.0.
[propagated-inputs]: Remove r-rhtslib.
[inputs]: Remove zlib.
---
gnu/packages/bioinformatics.scm | 7 ++-----
1 file changed, 2 insertions(+), 5 deletions(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 1ab5f98..2a8cbf6 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -7423,13 +7423,13 @@ reference point and sorted by a user defined feature.")
(define-public r-genomation
(package
(name "r-genomation")
- (version "1.8.0")
+ (version "1.10.0")
(source (origin
(method url-fetch)
(uri (bioconductor-uri "genomation" version))
(sha256
(base32
- "0r71nf8p3aq3yffqxg4yir1zmm7rar5a57nmy1kpqpn8kaf2svjl"))))
+ "1ddd8c9w1f1i1ga9rpbwiic8rsaws1chdxx4j38bpyaiy4zhz1ca"))))
(build-system r-build-system)
(propagated-inputs
`(("r-biostrings" ,r-biostrings)
@@ -7448,14 +7448,11 @@ reference point and sorted by a user defined feature.")
("r-rcpp" ,r-rcpp)
("r-readr" ,r-readr)
("r-reshape2" ,r-reshape2)
- ("r-rhtslib" ,r-rhtslib)
("r-rsamtools" ,r-rsamtools)
("r-rtracklayer" ,r-rtracklayer)
("r-runit" ,r-runit)
("r-s4vectors" ,r-s4vectors)
("r-seqpattern" ,r-seqpattern)))
- (inputs
- `(("zlib" ,zlib)))
(home-page "http://bioinformatics.mdc-berlin.de/genomation/")
(synopsis "Summary, annotation and visualization of genomic data")
(description
- 73/89: gnu: r-category: Update to 2.44.0., (continued)
- 73/89: gnu: r-category: Update to 2.44.0., Ricardo Wurmus, 2017/11/07
- 77/89: gnu: r-biocparallel: Update to 1.12.0., Ricardo Wurmus, 2017/11/07
- 84/89: gnu: r-mzr: Remove bundled copy of boost., Ricardo Wurmus, 2017/11/07
- 80/89: gnu: r-genomicfeatures: Update to 1.30.0., Ricardo Wurmus, 2017/11/07
- 79/89: gnu: Add r-rmysql., Ricardo Wurmus, 2017/11/07
- 64/89: gnu: r-qvalue: Update to 2.10.0., Ricardo Wurmus, 2017/11/07
- 35/89: gnu: r-genomeinfodb: Update to 1.14.0., Ricardo Wurmus, 2017/11/07
- 41/89: gnu: r-annotationdbi: Update to 1.40.0., Ricardo Wurmus, 2017/11/07
- 47/89: gnu: r-graph: Update to 1.56.0., Ricardo Wurmus, 2017/11/07
- 46/89: gnu: r-genomicalignments: Update to 1.14.0., Ricardo Wurmus, 2017/11/07
- 52/89: gnu: r-genomation: Update to 1.10.0.,
Ricardo Wurmus <=
- 55/89: gnu: r-affy: Update to 1.56.0., Ricardo Wurmus, 2017/11/07
- 56/89: gnu: r-affyio: Update to 1.48.0., Ricardo Wurmus, 2017/11/07
- 65/89: gnu: r-motifrg: Update to 1.22.0., Ricardo Wurmus, 2017/11/07
- 85/89: gnu: r-annotationhub: Update to 2.10.0., Ricardo Wurmus, 2017/11/07
- 71/89: gnu: r-preprocesscore: Update to 1.40.0., Ricardo Wurmus, 2017/11/07
- 74/89: gnu: r-gostats: Update to 2.44.0., Ricardo Wurmus, 2017/11/07
- 75/89: gnu: r-edger: Update to 3.20.1., Ricardo Wurmus, 2017/11/07
- 39/89: gnu: r-genomicranges: Update to 1.30.0., Ricardo Wurmus, 2017/11/07
- 40/89: gnu: r-biobase: Update to 2.38.0., Ricardo Wurmus, 2017/11/07
- 37/89: gnu: r-limma: Update to 3.34.0., Ricardo Wurmus, 2017/11/07