24/25: gnu: Add r-grohmm.

[Ricardo Wurmus]

rekado pushed a commit to branch master
in repository guix.

commit 684f29bd2e7ae7d51be4b873a01bf0836c3fa64b
Author: Ricardo Wurmus <address@hidden>
Date:   Wed Sep 21 22:45:40 2016 +0200

    gnu: Add r-grohmm.
    
    * gnu/packages/bioinformatics.scm (r-grohmm): New variable.
---
 gnu/packages/bioinformatics.scm |   26 ++++++++++++++++++++++++++
 1 file changed, 26 insertions(+)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index fdd7113..3837879 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -5396,6 +5396,32 @@ experimental designs is facilitated by a consistently 
implemented sample
 annotation infrastructure.")
     (license license:artistic2.0)))
 
+(define-public r-grohmm
+  (package
+    (name "r-grohmm")
+    (version "1.6.0")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (bioconductor-uri "groHMM" version))
+       (sha256
+        (base32
+         "1l9mcyzyc548114ysb9r0q7hgzw3yy7gpiahrzkzj6hblc4f1jyp"))))
+    (properties `((upstream-name . "groHMM")))
+    (build-system r-build-system)
+    (propagated-inputs
+     `(("r-genomeinfodb" ,r-genomeinfodb)
+       ("r-genomicalignments" ,r-genomicalignments)
+       ("r-genomicranges" ,r-genomicranges)
+       ("r-iranges" ,r-iranges)
+       ("r-rtracklayer" ,r-rtracklayer)
+       ("r-s4vectors" ,r-s4vectors)))
+    (home-page "https://github.com/Kraus-Lab/groHMM";)
+    (synopsis "GRO-seq analysis pipeline")
+    (description
+     "This package provides a pipeline for the analysis of GRO-seq data.")
+    (license license:gpl3+)))
+
 (define-public vsearch
   (package
     (name "vsearch")