guix-commits
[Top][All Lists]
Advanced

[Date Prev][Date Next][Thread Prev][Thread Next][Date Index][Thread Index]

04/05: gnu: seqmagick: Use BioPython 1.66.


From: Ben Woodcroft
Subject: 04/05: gnu: seqmagick: Use BioPython 1.66.
Date: Mon, 19 Sep 2016 07:06:16 +0000 (UTC)

benwoodcroft pushed a commit to branch master
in repository guix.

commit 7bba95b769e25cd9d1854029a1557d4f97c84235
Author: Ben Woodcroft <address@hidden>
Date:   Mon Sep 19 12:18:19 2016 +1000

    gnu: seqmagick: Use BioPython 1.66.
    
    * gnu/packages/bioinformatics.scm (seqmagick)[inputs]: Use
    python2-biopython-1.66 instead of python2-biopython.
---
 gnu/packages/bioinformatics.scm |    6 +++++-
 1 file changed, 5 insertions(+), 1 deletion(-)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 5effc80..21fc96e 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -4593,7 +4593,11 @@ bioinformatics file formats, sequence alignment, and 
more.")
          ;; https://github.com/fhcrc/seqmagick/issues/55
          (replace 'check (lambda _ (zero? (system* "nosetests")))))))
     (inputs
-     `(("python-biopython" ,python2-biopython)))
+     ;; biopython-1.66 is required due to
+     ;; https://github.com/fhcrc/seqmagick/issues/59
+     ;; When that issue is resolved the 'python2-biopython-1.66' package
+     ;; should be removed.
+     `(("python-biopython" ,python2-biopython-1.66)))
     (native-inputs
      `(("python-setuptools" ,python2-setuptools)
        ("python-nose" ,python2-nose)))



reply via email to

[Prev in Thread] Current Thread [Next in Thread]