[Gsrc-commit] trunk r9721: update rnaz to 2.1.1

[Carl Hansen]

------------------------------------------------------------
revno: 9721
revision-id: carlhansen@gnu.org-20231128025821-z9532h0rm3uvrwfl
parent: carlhansen@gnu.org-20231128012302-j4euond2om7lw21b
committer: carlhansen@gnu.org
branch nick: trunk
timestamp: Mon 2023-11-27 18:58:21 -0800
message:
  update rnaz to 2.1.1
modified:
  pkg/bio/rnaz/Makefile          makefile-20160617195624-kwz1a09vkg4le6fu-174
  pkg/bio/rnaz/sha256sums        sha256sums-20160617195624-kwz1a09vkg4le6fu-175

=== modified file 'pkg/bio/rnaz/Makefile'
--- a/pkg/bio/rnaz/Makefile     2016-06-17 19:57:40 +0000
+++ b/pkg/bio/rnaz/Makefile     2023-11-28 02:58:21 +0000
@@ -1,5 +1,6 @@
 # Copyright © 2013, 2014 Brandon Invergo <brandon@invergo.net>
-#
+# Copyright ©2023 Carl Hansen
+
 # This file is part of GSRC.
 #
 # GSRC is free software: you can redistribute it and/or modify it
@@ -18,7 +19,7 @@
 NAME = RNAz
 GARNAME = rnaz
 UPSTREAMNAME = RNAz
-GARVERSION = 2.1
+GARVERSION = 2.1.1
 HOME_URL = http://www.tbi.univie.ac.at/~wash/RNAz/
 DESCRIPTION = Predicting structural noncoding RNAs
 define BLURB
@@ -26,19 +27,35 @@
 thermodynamically stable RNA secondary structures in multiple sequence
 alignments.
 endef
-LICENSE =
+LICENSE = free for non-commercial....
 CITE = doi:10.1142/9789814295291_0009 
 
-######################################################################
-
-MASTER_SITES = http://www.tbi.univie.ac.at/
-MASTER_SUBDIR = ~wash/$(UPSTREAMNAME)/
-DISTFILES = $(DISTNAME).tar.gz
-
-BUILDDEPS =
+#######################################################################
+# https://github.com/ViennaRNA/RNAz.git
+
+#MASTER_SITES = http://www.tbi.univie.ac.at/
+#MASTER_SUBDIR = ~wash/$(UPSTREAMNAME)/
+MASTER_SITES = http://github.com/
+MASTER_SUBDIR = ViennaRNA/$(UPSTREAMNAME).git
+GIT_PATH = $(MASTER_SITES)$(MASTER_SUBDIR)
+
+GIT_REVISION = master
+WORKSRC =               $(DOWNLOADDIRGIT)/$(GARNAME)
+WORKOBJ =  $(WORKDIR)/$(DISTNAME)-build
+
+SIGFILES =
+BUILDDEPS = 
 LIBDEPS =
 
+#CONFIGURE_SCRIPTS =
+#BUILD_SCRIPTS =  my
+#INSTALL_SCRIPTS = my
+
+USE_AUTORECONF = y
 ######################################################################
 
-include ../../../gar/gar.lib/auto.mk
+include ../../../gar/gar.lib/autotools.mk
 include config.mk
+
+fetch: fetch-git
+

=== modified file 'pkg/bio/rnaz/sha256sums'
--- a/pkg/bio/rnaz/sha256sums   2016-06-17 19:57:40 +0000
+++ b/pkg/bio/rnaz/sha256sums   2023-11-28 02:58:21 +0000
@@ -1,1 +0,0 @@
-b32ec0361889319f2058f224d6c456c853dbc30dff4dba90c53a8f9fd7b83be5  
download/RNAz-2.1.tar.gz