bug#56143: closed ([PATCH] gnu: Add r-asgsca.)

[GNU bug Tracking System]

Your message dated Mon, 31 Oct 2022 21:42:35 +0100
with message-id <87wn8fbu7q.fsf@elephly.net>
and subject line [PATCH] gnu: Add r-asgsca.
has caused the debbugs.gnu.org bug report #56143,
regarding [PATCH] gnu: Add r-asgsca.
to be marked as done.

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56143: https://debbugs.gnu.org/cgi/bugreport.cgi?bug=56143
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> --- Begin Message ---
>
>
>
> Subject: 
>
> [PATCH] gnu: Add r-asgsca.
>
>
>
>
> Date: 
>
> Wed, 22 Jun 2022 16:07:05 +0200
>
>
>
>
> * gnu/packages/bioconductor.scm (r-asgsca): New variable.
> ---
>  gnu/packages/bioconductor.scm | 24 ++++++++++++++++++++++++
>  1 file changed, 24 insertions(+)
>
> diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
> index 1e87b190c2..fba3004e8d 100644
> --- a/gnu/packages/bioconductor.scm
> +++ b/gnu/packages/bioconductor.scm
> @@ -2029,6 +2029,30 @@ (define-public r-aneufinder
>  sequencing data.")
>      (license license:artistic2.0)))
>  
> +(define-public r-asgsca
> +  (package
> +    (name "r-asgsca")
> +    (version "1.30.0")
> +    (source (origin
> +              (method url-fetch)
> +              (uri (bioconductor-uri "ASGSCA" version))
> +              (sha256
> +               (base32
> +                "0mxrrkm2lg7gxjh8ynn6qmryn8wqda7b83sr51dpgblay83jcbaq"))))
> +    (properties `((upstream-name . "ASGSCA")))
> +    (build-system r-build-system)
> +    (propagated-inputs (list r-mass r-matrix))
> +    (home-page "https://bioconductor.org/packages/ASGSCA";)
> +    (synopsis
> +     "Analysis of the associations between multiple genotypes and multiple 
> traits")
> +    (description
> +     "The package @dfn{ASGSCA} (Association Study using Generalized Structured
> +Component Analysis) provides tools to model and test the association between
> +multiple genotypes and multiple traits, taking into account the prior 
> biological
> +knowledge.  Genes, and clinical pathways are incorporated in the model as 
> latent
> +variables.")
> +    (license license:gpl3)))
> +
>  (define-public r-biocversion
>    (package
>      (name "r-biocversion")
>
> base-commit: e74fa406e1043547242a8b67ab9907fea7aae6b9
> -- 
> 2.36.1
>
>
>
>
> --- End Message ---
> --- Begin Message ---
>
>
>
> Subject: 
>
> [PATCH] gnu: Add r-asgsca.
>
>
>
>
> Date: 
>
> Mon, 31 Oct 2022 21:42:35 +0100
>
>
>
>
> User-agent: 
>
> mu4e 1.8.9; emacs 28.1
>
>
>
>
> Applied, thanks!
>
> -- 
> Ricardo
>
>
> --- End Message ---