bug#36790: closed ([PATCH 01/11] gnu: Add r-umap.)

[GNU bug Tracking System]

Your message dated Fri, 21 Feb 2020 18:07:33 +0100
with message-id <CAJ3okZ2GnkOKAPNwz8FwmRbZ+W+pYHiwB=address@hidden>
and subject line patches merged
has caused the debbugs.gnu.org bug report #36797,
regarding [PATCH 01/11] gnu: Add r-umap.
to be marked as done.

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-- 
36797: http://debbugs.gnu.org/cgi/bugreport.cgi?bug=36797
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> --- Begin Message ---
>
>
>
> Subject: 
>
> [PATCH 01/11] gnu: Add r-umap.
>
>
>
>
> Date: 
>
> Wed, 24 Jul 2019 20:21:54 +0200
>
>
>
>
> * gnu/packages/cran.scm (r-umap): New variable.
> ---
>  gnu/packages/cran.scm | 27 +++++++++++++++++++++++++++
>  1 file changed, 27 insertions(+)
>
> diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
> index 3f0d819df7..768a7d09c5 100644
> --- a/gnu/packages/cran.scm
> +++ b/gnu/packages/cran.scm
> @@ -14530,3 +14530,30 @@ including regression, classification and ranking.  The 
> package is made to be
>  extensible, so that users are also allowed to define their own objectives
>  easily.")
>      (license license:asl2.0)))
> +
> +(define-public r-umap
> +  (package
> +    (name "r-umap")
> +    (version "0.2.2.0")
> +    (source
> +      (origin
> +        (method url-fetch)
> +        (uri (cran-uri "umap" version))
> +        (sha256
> +          (base32
> +            "1s82w9gy1387h7cprjfbhp49l89zbmn3gc9s0wzqb1s73nza9n31"))))
> +    (build-system r-build-system)
> +    (propagated-inputs
> +      `(("r-rcpp" ,r-rcpp)
> +        ("r-reticulate" ,r-reticulate)
> +        ("r-rspectra" ,r-rspectra)))
> +    (home-page "https://github.com/tkonopka/umap";)
> +    (synopsis
> +      "Uniform Manifold Approximation and Projection")
> +    (description
> +      "Uniform manifold approximation and projection is a technique for
> +dimension reduction.  The algorithm was described by McInnes and Healy (2018)
> +in <arXiv:1802.03426>.  This package provides an interface to the UMAP
> +algorithm in R, including a translation of the original algorithm into R with
> +minimal dependencies.")
> +    (license license:expat)))
> -- 
> 2.21.0
>
>
>
>
> --- End Message ---
> --- Begin Message ---
>
>
>
> Subject: 
>
> patches merged
>
>
>
>
> Date: 
>
> Fri, 21 Feb 2020 18:07:33 +0100
>
>
>
>
> Dear,
>
> All the patches are merged now; except r-flowpeaks. Because this
> package use Artistic1.0 which is not enough clear to be considered
> "free" [1,2] (GNU's point of view [3]) and upstream are not
> responsive, let clean the bug tracker. :-)
>
> [1] https://debbugs.gnu.org/cgi/bugreport.cgi?bug=36797#16
> [2] https://lists.gnu.org/archive/html/guix-devel/2019-12/msg00286.html
> [3] https://www.gnu.org/licenses/license-list.en.html#ArtisticLicense
>
> All the best,
> simon
>
>
> --- End Message ---