## ----------------------------- ## ## GNU Libtool 2.4.6 test suite. ## ## ----------------------------- ## testsuite: command line was: $ /home/ittipat/src/libtool-2.4.6/tests/testsuite MAKE=make CC=gcc CFLAGS=-g -O2 CPP=gcc -E CPPFLAGS= LD=/usr/bin/ld -m elf_x86_64 LDFLAGS= LIBS= LN_S=ln -s NM=/usr/bin/nm -B RANLIB=ranlib AR=ar EGREP=/bin/grep -E FGREP=/bin/grep -F GREP=/bin/grep SED=/bin/sed STRIP=strip lt_INSTALL=/usr/bin/install -c MANIFEST_TOOL=: OBJEXT=o EXEEXT= SHELL=/bin/sh CONFIG_SHELL=/bin/sh CXX=g++ CXXFLAGS=-g -O2 CXXCPP=g++ -E F77=g77 FFLAGS=-g -O2 FC=gfortran FCFLAGS=-g -O2 GCJ= GCJFLAGS=-g -O2 lt_cv_with_aix_soname=aix lt_cv_to_host_file_cmd=func_convert_file_noop lt_cv_to_tool_file_cmd=func_convert_file_noop _lt_pkgdatadir=/home/ittipat/src/libtool-2.4.6 LIBTOOLIZE=/home/ittipat/src/libtool-2.4.6/libtoolize LIBTOOL=/home/ittipat/src/libtool-2.4.6/libtool tst_aclocaldir=/home/ittipat/src/libtool-2.4.6/m4 ## ---------- ## ## ChangeLog. ## ## ---------- ## | 2015-02-15 Gary V. Vaughan | | version 2.4.6 | * NEWS: Record release date. | | 2015-02-06 Gary V. Vaughan | | libtool: don't execute automake and autoconf on every invocation. | Regression from 2.4.2 was causing noticable slow-down in builds | that call libtool many times. ## --------- ## ## Platform. ## ## --------- ## hostname = castor.narit.or.th uname -m = x86_64 uname -r = 2.6.32-504.8.1.el6.x86_64 uname -s = Linux uname -v = #1 SMP Wed Jan 28 21:11:36 UTC 2015 /usr/bin/uname -p = unknown /bin/uname -X = unknown /bin/arch = x86_64 /usr/bin/arch -k = unknown /usr/convex/getsysinfo = unknown /usr/bin/hostinfo = unknown /bin/machine = unknown /usr/bin/oslevel = unknown /bin/universe = unknown PATH: /home/ittipat/src/libtool-2.4.6/tests PATH: /home/ittipat/miniconda3/bin PATH: /usr/lib64/qt-3.3/bin PATH: /usr/lib/perfsonar/scripts PATH: /usr/local/bin PATH: /bin PATH: /usr/bin PATH: /usr/local/sbin PATH: /usr/sbin PATH: /sbin PATH: /opt/bio/ncbi/bin PATH: /opt/bio/mpiblast/bin PATH: /opt/bio/EMBOSS/bin PATH: /opt/bio/clustalw/bin PATH: /opt/bio/tcoffee/bin PATH: /opt/bio/hmmer/bin PATH: /opt/bio/phylip/exe PATH: /opt/bio/mrbayes PATH: /opt/bio/fasta PATH: /opt/bio/glimmer/bin PATH: /opt/bio/glimmer/scripts PATH: /opt/bio/gromacs/bin PATH: /opt/bio/gmap/bin PATH: /opt/bio/tigr/bin PATH: /opt/bio/autodocksuite/bin PATH: /opt/bio/wgs/bin PATH: /opt/eclipse PATH: /opt/ganglia/bin PATH: /opt/ganglia/sbin PATH: /opt/ibutils/bin PATH: /usr/java/latest/bin PATH: /opt/maven/bin PATH: /opt/pdsh/bin PATH: /opt/rocks/bin PATH: /opt/rocks/sbin PATH: /opt/condor/bin PATH: /opt/condor/sbin PATH: /opt/gridengine/bin/linux-x64 PATH: /usr/include/gtk-2.0/gtk testsuite: atconfig: | # Configurable variable values for building test suites. | # Generated by ./config.status. | # Copyright (C) 2012 Free Software Foundation, Inc. | | # The test suite will define top_srcdir=/../.. etc. | at_testdir='tests' | abs_builddir='/home/ittipat/src/libtool-2.4.6/tests' | at_srcdir='.' | abs_srcdir='/home/ittipat/src/libtool-2.4.6/tests' | at_top_srcdir='..' | abs_top_srcdir='/home/ittipat/src/libtool-2.4.6' | at_top_build_prefix='../' | abs_top_builddir='/home/ittipat/src/libtool-2.4.6' | | # Backward compatibility with Autotest <= 2.59b: | at_top_builddir=$at_top_build_prefix | | AUTOTEST_PATH='tests' | | SHELL=${CONFIG_SHELL-'/bin/sh'} ## ---------------- ## ## Tested programs. ## ## ---------------- ## ## ------------------ ## ## Running the tests. ## ## ------------------ ## testsuite: starting at: Fri May 17 16:47:26 ICT 2019 1. func_munge_path_list works (configure-funcs.at:39): ok (0m0.004s 0m0.002s) 2. libtoolize macro installation (libtoolize.at:84): ok (0m0.089s 0m0.019s) 3. libtoolize macro directory mismatch error (libtoolize.at:109): ok (0m0.079s 0m0.022s) 4. multiple AC_CONFIG_MACRO_DIRS invocation (libtoolize.at:130): ok (0m0.080s 0m0.026s) 5. multiple AC_CONFIG_MACRO_DIRS directories (libtoolize.at:158): ok (0m0.082s 0m0.023s) 6. libtoolize ACLOCAL_AMFLAGS extraction (libtoolize.at:190): ok (0m0.095s 0m0.016s) 7. libtoolize macro serial update (libtoolize.at:225): ok (0m0.359s 0m0.107s) 8. libtoolize config files serial update (libtoolize.at:298): ok (0m0.384s 0m0.138s) 9. diagnose missing LT_CONFIG_LTDL_DIR (libtoolize.at:378): ok (0m0.111s 0m0.038s) 10. copy ltdl.m4 with shared macro directory (libtoolize.at:523): ok (0m0.115s 0m0.060s) 11. correctly parse LTDL_INIT from configure.ac (libtoolize.at:535): ok (0m0.116s 0m0.058s) 12. diagnose missing LTDL_INIT invocation (libtoolize.at:547): ok (0m0.119s 0m0.059s) 13. upgrading verbatim style aclocal.m4 (libtoolize.at:624): ok (0m1.465s 0m0.117s) 14. verbatim aclocal.m4 w/o AC_CONFIG_MACRO_DIRS (libtoolize.at:748): ok (0m1.530s 0m0.094s) 15. nonrecursive ltdl with AC_CONFIG_MACRO_DIRS (libtoolize.at:877): ok (0m0.105s 0m0.038s) 16. subproject ltdl with unconventional layout (libtoolize.at:948): ok (0m0.123s 0m0.062s) 17. Subproject ltdl without GNU M4 (libtoolize.at:1024): ok (0m0.112s 0m0.065s) 18. LIBTOOLIZE_OPTIONS (libtoolize.at:1096): ok (0m0.245s 0m0.074s) 19. cleanup old installation (libtoolize.at:1142): ok (0m0.131s 0m0.072s) 20. check help output (libtool.at:33): ok (0m0.086s 0m0.011s) 21. diagnose no mode specified (libtool.at:48): ok (0m0.028s 0m0.002s) 22. quote shell meta-characters in filenames (libtool.at:60): ok (0m1.718s 0m0.153s) 23. transform source suffices (libtool.at:155): ok (0m0.860s 0m0.163s) 24. check link mode operation (libtool.at:183): ok (0m0.067s 0m0.004s) 25. check objectlist file operation (libtool.at:205): ok (0m0.031s 0m0.001s) 27. link against a preloaded static library (demo.at:383): ok (0m3.200s 0m0.509s) 28. build and dynamically load a module (demo.at:400): ok (0m3.274s 0m0.593s) 29. preload static and dynamic module (demo.at:417): ok (0m3.352s 0m0.534s) 30. deplibs_check_method (demo.at:437): ok (0m3.202s 0m0.514s) 31. disable fast install (demo.at:478): ok (0m3.226s 0m0.617s) 32. force PIC objects (demo.at:496): ok (0m3.133s 0m0.519s) 33. force non-PIC objects (demo.at:510): skipped (demo.at:535) 34. hardcoding library path (demo.at:548): ok (0m3.396s 0m0.587s) 35. binary relinking at install time (demo.at:714): ok (0m3.313s 0m0.597s) 36. uninstalled libraries have priority (demo.at:786): ok (0m3.365s 0m0.596s) 37. linking with long file names (demo.at:809): ok (0m3.284s 0m0.523s) 38. override pic_flag at configure time (pic_flag.at:24): ok (0m3.160s 0m0.565s) 39. test --with-pic (with-pic.at:24): skipped (with-pic.at:40) 40. build and link against a static library (cdemo.at:135): ok (0m2.851s 0m0.454s) 41. build and link against a dynamic library (cdemo.at:150): ok (0m2.822s 0m0.412s) 42. build both static and dynamic (cdemo.at:165): ok (0m2.845s 0m0.426s) 43. allow_undefined_flag (cdemo.at:180): ok (0m2.806s 0m0.467s) 44. C convenience archives (convenience.at:30): ok (0m0.688s 0m0.147s) 45. C++ convenience archives (convenience.at:69): ok (0m0.847s 0m0.220s) 46. F77 convenience archives (convenience.at:109): ok (0m0.740s 0m0.163s) 47. FC convenience archives (convenience.at:169): ok (0m0.818s 0m0.209s) 48. Java convenience archives (convenience.at:229): skipped (convenience.at:230) 49. static library interdependencies (depdemo.at:285): ok (0m3.702s 0m0.542s) 50. shared library interdependencies (depdemo.at:302): ok (0m3.862s 0m0.544s) 51. shared and static interdependencies (depdemo.at:319): ok (0m3.896s 0m0.573s) 52. disable fast install (depdemo.at:336): ok (0m4.046s 0m0.623s) 53. binary relinking at install time (depdemo.at:354): ok (0m3.928s 0m0.621s) 54. standard command line options (help.at:26): ok (0m0.397s 0m0.049s) 55. mode short-hands (help.at:45): ok (0m0.429s 0m0.057s) 56. debug tracing (help.at:97): ok (0m1.186s 0m0.214s) 57. duplicate members in archive tests (duplicate_members.at:26): ok (0m0.435s 0m0.123s) 58. duplicate convenience archive names (duplicate_conv.at:25): ok (0m0.688s 0m0.128s) 60. passing CC flags through libtool (flags.at:116): ok (0m0.613s 0m0.046s) 61. passing CXX flags through libtool (flags.at:116): ok (0m0.674s 0m0.100s) 62. passing F77 flags through libtool (flags.at:116): ok (0m0.656s 0m0.078s) 63. passing FC flags through libtool (flags.at:116): ok (0m0.717s 0m0.088s) 64. passing GCJ flags through libtool (flags.at:116): skipped (flags.at:116) 65. inherited_linker_flags (inherited_flags.at:26): ok (0m0.545s 0m0.105s) 66. Link order test (link-order.at:27): ok (0m0.985s 0m0.182s) 67. Link order of deplibs (link-order2.at:46): ok (0m2.027s 0m0.330s) 68. Failure tests (fail.at:28): ok (0m0.371s 0m0.079s) 69. shlibpath_overrides_runpath (shlibpath.at:25): ok (0m0.438s 0m0.088s) 70. Runpath in libtool library files (runpath-in-lalib.at:25): ok (0m0.386s 0m0.060s) 71. static linking flags for programs (static.at:68): ok (0m2.363s 0m0.554s) 72. ccache -all-static (static.at:359): ok (0m0.062s 0m0.019s) 73. Export test (export.at:25): ok (0m1.005s 0m0.199s) 74. export from a DLL with a .def file (export-def.at:25): skipped (export-def.at:35) 75. sys_lib_search_path (search-path.at:24): ok (0m0.104s 0m0.020s) 76. sys_lib_search_path on w32 (search-path.at:62): skipped (search-path.at:85) 77. indirect convenience (indirect_deps.at:25): ok (0m0.538s 0m0.106s) 78. indirect uninstalled (indirect_deps.at:71): ok (0m0.610s 0m0.126s) 80. both of -o prog and -o prog$EXEEXT work (exeext.at:26): skipped (exeext.at:29) 81. execute mode (execute-mode.at:25): ok (0m2.084s 0m0.276s) 82. bindir basic lib test (bindir.at:64): ok (0m0.339s 0m0.086s) 83. bindir install tests (bindir.at:173): ok (0m8.078s 0m1.184s) 84. cwrapper for uninstalled executables (cwrapper.at:25): ok (0m0.920s 0m0.237s) 85. cwrapper string length (cwrapper.at:138): skipped (cwrapper.at:190) 86. cwrapper and installed shared libraries (cwrapper.at:201): ok (0m0.363s 0m0.084s) 87. deplib in subdir (deplib-in-subdir.at:34): ok (0m1.318s 0m0.272s) 88. inferred tag (infer-tag.at:30): ok (0m0.027s 0m0.009s) 89. CXX inferred tag (infer-tag.at:42): ok (0m0.036s 0m0.008s) 90. F77 inferred tag (infer-tag.at:55): ok (0m0.031s 0m0.013s) 91. FC inferred tag (infer-tag.at:69): ok (0m0.049s 0m0.022s) 92. GCJ inferred tag (infer-tag.at:83): skipped (infer-tag.at:84) 93. localized compiler messages (localization.at:24): ok (0m0.053s 0m0.022s) 94. nocase library search (nocase.at:26): skipped (nocase.at:33) 95. Install tests (install.at:25): ok (0m0.182s 0m0.034s) 96. versioning (versioning.at:24): ok (0m1.709s 0m0.274s) 97. Simple DESTDIR install (destdir.at:48): ok (0m0.242s 0m0.046s) 98. DESTDIR with in-package deplibs (destdir.at:75): ok (0m0.871s 0m0.179s) 99. AM_PROG_LIBTOOL (old-m4-iface.at:41): ok (0m1.025s 0m0.326s) 100. AC_WITH_LTDL (old-m4-iface.at:113): ok (0m7.972s 0m1.922s) 101. AC_CONFIG_MACRO_DIR (old-m4-iface.at:173): ok (0m0.083s 0m0.023s) 102. Makefile.inc (old-ltdl-iface.at:35): ok (0m5.120s 0m0.813s) 103. C subdir-objects (am-subdir.at:33): ok (0m2.568s 0m0.411s) 104. C++ subdir-objects (am-subdir.at:93): ok (0m2.843s 0m1.689s) 105. lt_dlexit unloading libs (lt_dlexit.at:30): ok (0m0.264s 0m0.050s) 106. lt_dlopenadvise library loading (lt_dladvise.at:28): ok (0m0.552s 0m0.124s) 108. lt_dlopen archive (lt_dlopen_a.at:23): ok (0m0.222s 0m0.028s) 109. lt_dlopenext error messages (lt_dlopenext.at:23): ok (0m0.268s 0m0.052s) 110. libdir of installed modules (ltdl-libdir.at:23): ok (0m0.201s 0m0.041s) 111. ltdl API (ltdl-api.at:25): skipped (ltdl-api.at:31) 112. dlloader API (dlloader-api.at:23): ok (0m0.173s 0m0.053s) 113. loadlibrary error messages (loadlibrary.at:23): skipped (loadlibrary.at:250) 115. resident modules (resident.at:27): ok (0m0.162s 0m0.035s) 116. SList functionality (slist.at:24): ok (0m0.090s 0m0.013s) 117. enforced lib prefix (need_lib_prefix.at:25): ok (0m0.400s 0m0.079s) 118. dynamically ltdl preload static modules (mdemo.at:625): ok (0m5.177s 0m0.878s) 119. dynamically ltdl load a shared module (mdemo.at:642): ok (0m5.247s 0m0.912s) 120. ltdl load shared and static modules (mdemo.at:659): ok (0m5.804s 0m0.990s) 121. ltdl dryrun (mdemo.at:676): ok (0m6.779s 0m1.021s) 122. link with library that loads ltdl modules (mdemo.at:777): ok (0m5.630s 0m0.990s) 123. compiling softlinked libltdl (standalone.at:31): ok (0m5.550s 0m1.379s) 124. compiling copied libltdl (standalone.at:46): ok (0m5.437s 0m1.273s) 125. installable libltdl (standalone.at:61): ok (0m5.462s 0m1.350s) 126. linking libltdl without autotools (standalone.at:79): ok (0m5.434s 0m1.279s) 127. compiling softlinked libltdl (subproject.at:57): ok (0m8.430s 0m1.964s) 128. compiling copied libltdl (subproject.at:73): ok (0m8.574s 0m1.937s) 129. installable libltdl (subproject.at:89): ok (0m9.744s 0m3.175s) 130. linking libltdl without autotools (subproject.at:109): ok (0m5.430s 0m1.315s) 131. compiling softlinked libltdl (nonrecursive.at:79): ok (0m4.958s 0m0.784s) 132. compiling copied libltdl (nonrecursive.at:103): ok (0m5.027s 0m0.805s) 133. installable libltdl (nonrecursive.at:127): ok (0m6.173s 0m0.942s) 134. compiling softlinked libltdl (recursive.at:60): ok (0m7.110s 0m0.919s) 135. compiling copied libltdl (recursive.at:80): ok (0m7.281s 0m0.900s) 136. installable libltdl (recursive.at:100): ok (0m8.829s 0m1.097s) 137. static library (tagdemo.at:338): ok (0m3.729s 0m0.667s) 138. shared library (tagdemo.at:353): ok (0m3.905s 0m0.693s) 139. shared and static together (tagdemo.at:368): ok (0m3.858s 0m0.628s) 140. allow_undefined_flag (tagdemo.at:383): ok (0m3.722s 0m0.647s) 141. simple template test (template.at:28): ok (0m0.275s 0m0.058s) 142. template test with subdirs (template.at:127): ok (0m1.052s 0m0.235s) 143. C++ static constructors (ctor.at:27): ok (0m0.219s 0m0.052s) 144. C++ exception handling (exceptions.at:24): ok (0m1.296s 0m0.207s) 145. config.status (early-libtool.at:32): ok (0m2.202s 0m0.332s) 146. config.lt (early-libtool.at:126): ok (0m2.814s 0m0.692s) 147. AC_NO_EXECUTABLES (no-executables.at:25): ok (0m3.183s 0m0.845s) 149. installable libltdl (configure-iface.at:102): ok (0m9.258s 0m2.093s) 150. --with-ltdl-include/lib (configure-iface.at:162): ok (0m9.896s 0m2.642s) 151. --with-included-ltdl (configure-iface.at:243): ok (0m8.848s 0m1.916s) 152. convenience libltdl (configure-iface.at:304): ok (0m2.153s 0m0.399s) 153. static library (f77demo.at:296): ok (0m3.685s 0m0.599s) 154. shared library (f77demo.at:314): ok (0m3.861s 0m0.681s) 155. shared and static together (f77demo.at:329): ok (0m3.893s 0m0.709s) 156. static library (fcdemo.at:310): ok (0m3.714s 0m0.636s) 157. shared library (fcdemo.at:328): ok (0m3.867s 0m0.716s) 158. shared and static together (fcdemo.at:343): ok (0m3.855s 0m0.668s) 159. darwin fat compile (darwin.at:26): skipped (darwin.at:42) 160. darwin concurrent library extraction (darwin.at:103): ok (0m0.901s 0m0.242s) 161. darwin gdb debug information (darwin.at:152): ok (0m0.300s 0m0.082s) 162. darwin ld warnings changing configure results (darwin.at:208): ok (0m4.696s 0m0.700s) 163. darwin can lt_dlopen .dylib and .so files (darwin.at:232): skipped (darwin.at:249) 164. dumpbin -symbols section hiding (dumpbin-symbols.at:25): skipped (dumpbin-symbols.at:42) 165. deplibs without file command (deplibs-mingw.at:27): ok (0m0.238s 0m0.045s) 166. -L=.../lib -l (sysroot.at:203): skipped (sysroot.at:203) 167. -L SYSROOT/.../lib -l (sysroot.at:204): skipped (sysroot.at:204) 168. SYSROOT/.../*.la (sysroot.at:205): skipped (sysroot.at:205) 169. Link option thorough search test (stresstest.at:31): ok (0m19.702s 0m4.429s) 170. Run tests with low max_cmd_len (cmdline_wrap.at:28): ok (1m28.357s 0m18.574s) testsuite: ending at: Fri May 17 17:02:17 ICT 2019 testsuite: test suite duration: 0h 14m 51s ## ------------- ## ## Test results. ## ## ------------- ## ERROR: 152 tests were run, 6 failed (5 expected failures). 18 tests were skipped. ## ------------------------ ## ## Summary of the failures. ## ## ------------------------ ## Failed tests: GNU Libtool 2.4.6 test suite test groups: NUM: FILE-NAME:LINE TEST-GROUP-NAME KEYWORDS 26: libtool.at:217 test LT_SUPPORTED_TAG interface Skipped tests: GNU Libtool 2.4.6 test suite test groups: NUM: FILE-NAME:LINE TEST-GROUP-NAME KEYWORDS 33: demo.at:510 force non-PIC objects libtoolize automake autoconf 39: with-pic.at:24 test --with-pic libtoolize automake autoconf 48: convenience.at:229 Java convenience archives gcj libtool 64: flags.at:116 passing GCJ flags through libtool libtool gcj 74: export-def.at:25 export from a DLL with a .def file libtool 76: search-path.at:62 sys_lib_search_path on w32 libtool 80: exeext.at:26 both of -o prog and -o prog$EXEEXT work libtool 85: cwrapper.at:138 cwrapper string length 92: infer-tag.at:83 GCJ inferred tag gcj libtool 94: nocase.at:26 nocase library search libtool 111: ltdl-api.at:25 ltdl API libltdl 113: loadlibrary.at:23 loadlibrary error messages libltdl 159: darwin.at:26 darwin fat compile 163: darwin.at:232 darwin can lt_dlopen .dylib and .so files libltdl dylib 164: dumpbin-symbols.at:25 dumpbin -symbols section hiding 166: sysroot.at:203 -L=.../lib -l libtool sysroot libtoolize automake autoconf 167: sysroot.at:204 -L SYSROOT/.../lib -l libtool sysroot libtoolize automake autoconf 168: sysroot.at:205 SYSROOT/.../*.la libtool sysroot libtoolize automake autoconf ## ---------------------- ## ## Detailed failed tests. ## ## ---------------------- ## # -*- compilation -*- 26. libtool.at:217: testing test LT_SUPPORTED_TAG interface ... ./libtool.at:219: test no != "$AUTOCONF" || exit 77 aclocal.m4:17: warning: this file was generated for autoconf 2.69. You have another version of autoconf. It may work, but is not guaranteed to. If you have problems, you may need to regenerate the build system entirely. To do so, use the procedure documented by the package, typically 'autoreconf'. configure.ac:98: error: Autoconf version 2.65 or higher is required aclocal.m4:437: AM_INIT_AUTOMAKE is expanded from... configure.ac:98: the top level autom4te: /usr/bin/m4 failed with exit status: 63 ./libtool.at:228: test -n "$traced_tags" ./libtool.at:228: exit code was 1, expected 0 26. libtool.at:217: 26. test LT_SUPPORTED_TAG interface (libtool.at:217): FAILED (libtool.at:228) ## ------------- ## ## ../config.log ## ## ------------- ## | This file contains any messages produced by compilers while | running configure, to aid debugging if configure makes a mistake. | | It was created by GNU Libtool configure 2.4.6, which was | generated by GNU Autoconf 2.69. Invocation command line was | | $ ./configure --prefix=/share/apps/utils/libtool-2.4.6 | | ## --------- ## | ## Platform. ## | ## --------- ## | | hostname = castor.narit.or.th | uname -m = x86_64 | uname -r = 2.6.32-504.8.1.el6.x86_64 | uname -s = Linux | uname -v = #1 SMP Wed Jan 28 21:11:36 UTC 2015 | | /usr/bin/uname -p = unknown | /bin/uname -X = unknown | | /bin/arch = x86_64 | /usr/bin/arch -k = unknown | /usr/convex/getsysinfo = unknown | /usr/bin/hostinfo = unknown | /bin/machine = unknown | /usr/bin/oslevel = unknown | /bin/universe = unknown | | PATH: /home/ittipat/miniconda3/bin | PATH: /usr/lib64/qt-3.3/bin | PATH: /usr/lib/perfsonar/scripts | PATH: /usr/local/bin | PATH: /bin | PATH: /usr/bin | PATH: /usr/local/sbin | PATH: /usr/sbin | PATH: /sbin | PATH: /opt/bio/ncbi/bin | PATH: /opt/bio/mpiblast/bin | PATH: /opt/bio/EMBOSS/bin | PATH: /opt/bio/clustalw/bin | PATH: /opt/bio/tcoffee/bin | PATH: /opt/bio/hmmer/bin | PATH: /opt/bio/phylip/exe | PATH: /opt/bio/mrbayes | PATH: /opt/bio/fasta | PATH: /opt/bio/glimmer/bin | PATH: /opt/bio/glimmer/scripts | PATH: /opt/bio/gromacs/bin | PATH: /opt/bio/gmap/bin | PATH: /opt/bio/tigr/bin | PATH: /opt/bio/autodocksuite/bin | PATH: /opt/bio/wgs/bin | PATH: /opt/eclipse | PATH: /opt/ganglia/bin | PATH: /opt/ganglia/sbin | PATH: /opt/ibutils/bin | PATH: /usr/java/latest/bin | PATH: /opt/maven/bin | PATH: /opt/pdsh/bin | PATH: /opt/rocks/bin | PATH: /opt/rocks/sbin | PATH: /opt/condor/bin | PATH: /opt/condor/sbin | PATH: /opt/gridengine/bin/linux-x64 | PATH: /home/ittipat/bin | PATH: /usr/include/gtk-2.0/gtk | | | ## ----------- ## | ## Core tests. ## | ## ----------- ## | | configure:2687: checking for GNU M4 that supports accurate traces | configure:2736: result: /usr/bin/m4 | configure:2739: checking whether /usr/bin/m4 accepts --gnu | configure:2749: result: yes | configure:2766: checking how m4 supports trace files | configure:2776: result: --debugfile | configure:2803: checking for a BSD-compatible install | configure:2871: result: /usr/bin/install -c | configure:2882: checking whether build environment is sane | configure:2937: result: yes | configure:3088: checking for a thread-safe mkdir -p | configure:3127: result: /bin/mkdir -p | configure:3134: checking for gawk | configure:3150: found /bin/gawk | configure:3161: result: gawk | configure:3172: checking whether make sets $(MAKE) | configure:3194: result: yes | configure:3223: checking whether make supports nested variables | configure:3240: result: yes | configure:3377: checking whether make supports nested variables | configure:3394: result: yes | configure:3419: checking build system type | configure:3433: result: x86_64-unknown-linux-gnu | configure:3453: checking host system type | configure:3466: result: x86_64-unknown-linux-gnu | configure:3493: autobuild project... GNU Libtool | configure:3499: autobuild revision... 2.4.6 | configure:3504: autobuild hostname... castor.narit.or.th | configure:3508: autobuild mode... default | configure:3516: autobuild timestamp... 20190517T094713Z | configure:3606: checking for gcc | configure:3622: found /usr/bin/gcc | configure:3633: result: gcc | configure:3862: checking for C compiler version | configure:3871: gcc --version >&5 | gcc (GCC) 4.4.7 20120313 (Red Hat 4.4.7-4) | Copyright (C) 2010 Free Software Foundation, Inc. | This is free software; see the source for copying conditions. There is NO | warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. | | configure:3882: $? = 0 | configure:3871: gcc -v >&5 | Using built-in specs. | Target: x86_64-redhat-linux | Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre --enable-libgcj-multifile --enable-java-maintainer-mode --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --disable-libjava-multilib --with-ppl --with-cloog --with-tune=generic --with-arch_32=i686 --build=x86_64-redhat-linux | Thread model: posix | gcc version 4.4.7 20120313 (Red Hat 4.4.7-4) (GCC) | configure:3882: $? = 0 | configure:3871: gcc -V >&5 | gcc: '-V' option must have argument | configure:3882: $? = 1 | configure:3871: gcc -qversion >&5 | gcc: unrecognized option '-qversion' | gcc: no input files | configure:3882: $? = 1 | configure:3902: checking whether the C compiler works | configure:3924: gcc conftest.c >&5 | configure:3928: $? = 0 | configure:3976: result: yes | configure:3979: checking for C compiler default output file name | configure:3981: result: a.out | configure:3987: checking for suffix of executables | configure:3994: gcc -o conftest conftest.c >&5 | configure:3998: $? = 0 | configure:4020: result: | configure:4042: checking whether we are cross compiling | configure:4050: gcc -o conftest conftest.c >&5 | configure:4054: $? = 0 | configure:4061: ./conftest | configure:4065: $? = 0 | configure:4080: result: no | configure:4085: checking for suffix of object files | configure:4107: gcc -c conftest.c >&5 | configure:4111: $? = 0 | configure:4132: result: o | configure:4136: checking whether we are using the GNU C compiler | configure:4155: gcc -c conftest.c >&5 | configure:4155: $? = 0 | configure:4164: result: yes | configure:4173: checking whether gcc accepts -g | configure:4193: gcc -c -g conftest.c >&5 | configure:4193: $? = 0 | configure:4234: result: yes | configure:4251: checking for gcc option to accept ISO C89 | configure:4314: gcc -c -g -O2 conftest.c >&5 | configure:4314: $? = 0 | configure:4327: result: none needed | configure:4352: checking whether gcc understands -c and -o together | configure:4374: gcc -c conftest.c -o conftest2.o | configure:4377: $? = 0 | configure:4374: gcc -c conftest.c -o conftest2.o | configure:4377: $? = 0 | configure:4389: result: yes | configure:4417: checking for style of include used by make | configure:4445: result: GNU | configure:4471: checking dependency style of gcc | configure:4582: result: gcc3 | configure:4603: checking how to run the C preprocessor | configure:4634: gcc -E conftest.c | configure:4634: $? = 0 | configure:4648: gcc -E conftest.c | conftest.c:11:28: error: ac_nonexistent.h: No such file or directory | configure:4648: $? = 1 | configure: failed program was: | | /* confdefs.h */ | | #define PACKAGE_NAME "GNU Libtool" | | #define PACKAGE_TARNAME "libtool" | | #define PACKAGE_VERSION "2.4.6" | | #define PACKAGE_STRING "GNU Libtool 2.4.6" | | #define PACKAGE_BUGREPORT "address@hidden" | | #define PACKAGE_URL "http://www.gnu.org/software/libtool/" | | #define PACKAGE "libtool" | | #define VERSION "2.4.6" | | /* end confdefs.h. */ | | #include | configure:4673: result: gcc -E | configure:4693: gcc -E conftest.c | configure:4693: $? = 0 | configure:4707: gcc -E conftest.c | conftest.c:11:28: error: ac_nonexistent.h: No such file or directory | configure:4707: $? = 1 | configure: failed program was: | | /* confdefs.h */ | | #define PACKAGE_NAME "GNU Libtool" | | #define PACKAGE_TARNAME "libtool" | | #define PACKAGE_VERSION "2.4.6" | | #define PACKAGE_STRING "GNU Libtool 2.4.6" | | #define PACKAGE_BUGREPORT "address@hidden" | | #define PACKAGE_URL "http://www.gnu.org/software/libtool/" | | #define PACKAGE "libtool" | | #define VERSION "2.4.6" | | /* end confdefs.h. */ | | #include | configure:4736: checking for grep that handles long lines and -e | configure:4794: result: /bin/grep | configure:4799: checking for egrep | configure:4861: result: /bin/grep -E | configure:4868: checking for Minix Amsterdam compiler | configure:4892: result: no | configure:4944: checking for ar | configure:4960: found /usr/bin/ar | configure:4971: result: ar | configure:5051: checking for ranlib | configure:5067: found /usr/bin/ranlib | configure:5078: result: ranlib | configure:5131: checking how to run the C preprocessor | configure:5201: result: gcc -E | configure:5221: gcc -E conftest.c | configure:5221: $? = 0 | configure:5235: gcc -E conftest.c | conftest.c:11:28: error: ac_nonexistent.h: No such file or directory | configure:5235: $? = 1 | configure: failed program was: | | /* confdefs.h */ | | #define PACKAGE_NAME "GNU Libtool" | | #define PACKAGE_TARNAME "libtool" | | #define PACKAGE_VERSION "2.4.6" | | #define PACKAGE_STRING "GNU Libtool 2.4.6" | | #define PACKAGE_BUGREPORT "address@hidden" | | #define PACKAGE_URL "http://www.gnu.org/software/libtool/" | | #define PACKAGE "libtool" | | #define VERSION "2.4.6" | | /* end confdefs.h. */ | | #include | configure:5313: checking how to print strings | configure:5340: result: printf | configure:5361: checking for a sed that does not truncate output | configure:5425: result: /bin/sed | configure:5443: checking for fgrep | configure:5505: result: /bin/grep -F | configure:5540: checking for ld used by gcc | configure:5607: result: /usr/bin/ld | configure:5614: checking if the linker (/usr/bin/ld) is GNU ld | configure:5629: result: yes | configure:5641: checking for BSD- or MS-compatible name lister (nm) | configure:5695: result: /usr/bin/nm -B | configure:5825: checking the name lister (/usr/bin/nm -B) interface | configure:5832: gcc -c -g -O2 conftest.c >&5 | configure:5835: /usr/bin/nm -B "conftest.o" | configure:5838: output | 0000000000000000 B some_variable | configure:5845: result: BSD nm | configure:5848: checking whether ln -s works | configure:5852: result: yes | configure:5860: checking the maximum length of command line arguments | configure:5991: result: 1966080 | configure:6039: checking how to convert x86_64-unknown-linux-gnu file names to x86_64-unknown-linux-gnu format | configure:6079: result: func_convert_file_noop | configure:6086: checking how to convert x86_64-unknown-linux-gnu file names to toolchain format | configure:6106: result: func_convert_file_noop | configure:6113: checking for /usr/bin/ld option to reload object files | configure:6120: result: -r | configure:6194: checking for objdump | configure:6210: found /usr/bin/objdump | configure:6221: result: objdump | configure:6250: checking how to recognize dependent libraries | configure:6450: result: pass_all | configure:6535: checking for dlltool | configure:6565: result: no | configure:6592: checking how to associate runtime and link libraries | configure:6619: result: printf %s\n | configure:6743: checking for archiver @FILE support | configure:6760: gcc -c -g -O2 conftest.c >&5 | configure:6760: $? = 0 | configure:6763: ar cru libconftest.a @conftest.lst >&5 | configure:6766: $? = 0 | configure:6771: ar cru libconftest.a @conftest.lst >&5 | ar: conftest.o: No such file or directory | configure:6774: $? = 1 | configure:6786: result: @ | configure:6844: checking for strip | configure:6860: found /usr/bin/strip | configure:6871: result: strip | configure:6943: checking for ranlib | configure:6970: result: ranlib | configure:7072: checking command to parse /usr/bin/nm -B output from gcc object | configure:7225: gcc -c -g -O2 conftest.c >&5 | configure:7228: $? = 0 | configure:7232: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm | configure:7235: $? = 0 | configure:7301: gcc -o conftest -g -O2 conftest.c conftstm.o >&5 | configure:7304: $? = 0 | configure:7342: result: ok | configure:7389: checking for sysroot | configure:7419: result: no | configure:7426: checking for a working dd | configure:7464: result: /bin/dd | configure:7468: checking how to truncate binary pipes | configure:7483: result: /bin/dd bs=4096 count=1 | configure:7619: gcc -c -g -O2 conftest.c >&5 | configure:7622: $? = 0 | configure:7812: checking for mt | configure:7842: result: no | configure:7862: checking if : is a manifest tool | configure:7868: : '-?' | configure:7876: result: no | configure:8548: checking for ANSI C header files | configure:8568: gcc -c -g -O2 conftest.c >&5 | configure:8568: $? = 0 | configure:8641: gcc -o conftest -g -O2 conftest.c >&5 | configure:8641: $? = 0 | configure:8641: ./conftest | configure:8641: $? = 0 | configure:8652: result: yes | configure:8665: checking for sys/types.h | configure:8665: gcc -c -g -O2 conftest.c >&5 | configure:8665: $? = 0 | configure:8665: result: yes | configure:8665: checking for sys/stat.h | configure:8665: gcc -c -g -O2 conftest.c >&5 | configure:8665: $? = 0 | configure:8665: result: yes | configure:8665: checking for stdlib.h | configure:8665: gcc -c -g -O2 conftest.c >&5 | configure:8665: $? = 0 | configure:8665: result: yes | configure:8665: checking for string.h | configure:8665: gcc -c -g -O2 conftest.c >&5 | configure:8665: $? = 0 | configure:8665: result: yes | configure:8665: checking for memory.h | configure:8665: gcc -c -g -O2 conftest.c >&5 | configure:8665: $? = 0 | configure:8665: result: yes | configure:8665: checking for strings.h | configure:8665: gcc -c -g -O2 conftest.c >&5 | configure:8665: $? = 0 | configure:8665: result: yes | configure:8665: checking for inttypes.h | configure:8665: gcc -c -g -O2 conftest.c >&5 | configure:8665: $? = 0 | configure:8665: result: yes | configure:8665: checking for stdint.h | configure:8665: gcc -c -g -O2 conftest.c >&5 | configure:8665: $? = 0 | configure:8665: result: yes | configure:8665: checking for unistd.h | configure:8665: gcc -c -g -O2 conftest.c >&5 | configure:8665: $? = 0 | configure:8665: result: yes | configure:8679: checking for dlfcn.h | configure:8679: gcc -c -g -O2 conftest.c >&5 | configure:8679: $? = 0 | configure:8679: result: yes | configure:9232: checking for objdir | configure:9247: result: .libs | configure:9511: checking if gcc supports -fno-rtti -fno-exceptions | configure:9529: gcc -c -g -O2 -fno-rtti -fno-exceptions conftest.c >&5 | cc1: warning: command line option "-fno-rtti" is valid for C++/ObjC++ but not for C | configure:9533: $? = 0 | configure:9546: result: no | configure:9904: checking for gcc option to produce PIC | configure:9911: result: -fPIC -DPIC | configure:9919: checking if gcc PIC flag -fPIC -DPIC works | configure:9937: gcc -c -g -O2 -fPIC -DPIC -DPIC conftest.c >&5 | configure:9941: $? = 0 | configure:9954: result: yes | configure:9983: checking if gcc static flag -static works | configure:10011: result: yes | configure:10026: checking if gcc supports -c -o file.o | configure:10047: gcc -c -g -O2 -o out/conftest2.o conftest.c >&5 | configure:10051: $? = 0 | configure:10073: result: yes | configure:10081: checking if gcc supports -c -o file.o | configure:10128: result: yes | configure:10161: checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries | configure:11420: result: yes | configure:11457: checking whether -lc should be explicitly linked in | configure:11465: gcc -c -g -O2 conftest.c >&5 | configure:11468: $? = 0 | configure:11483: gcc -shared -fPIC -DPIC conftest.o -v -Wl,-soname -Wl,conftest -o conftest 2\>\&1 \| /bin/grep -lc \>/dev/null 2\>\&1 | configure:11486: $? = 0 | configure:11500: result: no | configure:11660: checking dynamic linker characteristics | configure:12241: gcc -o conftest -g -O2 -Wl,-rpath -Wl,/foo conftest.c >&5 | configure:12241: $? = 0 | configure:12478: result: GNU/Linux ld.so | configure:12600: checking how to hardcode library paths into programs | configure:12625: result: immediate | configure:12727: checking for shl_load | configure:12727: gcc -o conftest -g -O2 conftest.c >&5 | /tmp/ccttlIYW.o: In function `main': | /home/ittipat/src/libtool-2.4.6/conftest.c:57: undefined reference to `shl_load' | collect2: ld returned 1 exit status | configure:12727: $? = 1 | configure: failed program was: | | /* confdefs.h */ | | #define PACKAGE_NAME "GNU Libtool" | | #define PACKAGE_TARNAME "libtool" | | #define PACKAGE_VERSION "2.4.6" | | #define PACKAGE_STRING "GNU Libtool 2.4.6" | | #define PACKAGE_BUGREPORT "address@hidden" | | #define PACKAGE_URL "http://www.gnu.org/software/libtool/" | | #define PACKAGE "libtool" | | #define VERSION "2.4.6" | | #define STDC_HEADERS 1 | | #define HAVE_SYS_TYPES_H 1 | | #define HAVE_SYS_STAT_H 1 | | #define HAVE_STDLIB_H 1 | | #define HAVE_STRING_H 1 | | #define HAVE_MEMORY_H 1 | | #define HAVE_STRINGS_H 1 | | #define HAVE_INTTYPES_H 1 | | #define HAVE_STDINT_H 1 | | #define HAVE_UNISTD_H 1 | | #define HAVE_DLFCN_H 1 | | #define LT_OBJDIR ".libs/" | | /* end confdefs.h. */ | | /* Define shl_load to an innocuous variant, in case declares shl_load. | | For example, HP-UX 11i declares gettimeofday. */ | | #define shl_load innocuous_shl_load | | | | /* System header to define __stub macros and hopefully few prototypes, | | which can conflict with char shl_load (); below. | | Prefer to if __STDC__ is defined, since | | exists even on freestanding compilers. */ | | | | #ifdef __STDC__ | | # include | | #else | | # include | | #endif | | | | #undef shl_load | | | | /* Override any GCC internal prototype to avoid an error. | | Use char because int might match the return type of a GCC | | builtin and then its argument prototype would still apply. */ | | #ifdef __cplusplus | | extern "C" | | #endif | | char shl_load (); | | /* The GNU C library defines this for functions which it implements | | to always fail with ENOSYS. Some functions are actually named | | something starting with __ and the normal name is an alias. */ | | #if defined __stub_shl_load || defined __stub___shl_load | | choke me | | #endif | | | | int | | main () | | { | | return shl_load (); | | ; | | return 0; | | } | configure:12727: result: no | configure:12731: checking for shl_load in -ldld | configure:12756: gcc -o conftest -g -O2 conftest.c -ldld >&5 | /usr/bin/ld: cannot find -ldld | collect2: ld returned 1 exit status | configure:12756: $? = 1 | configure: failed program was: | | /* confdefs.h */ | | #define PACKAGE_NAME "GNU Libtool" | | #define PACKAGE_TARNAME "libtool" | | #define PACKAGE_VERSION "2.4.6" | | #define PACKAGE_STRING "GNU Libtool 2.4.6" | | #define PACKAGE_BUGREPORT "address@hidden" | | #define PACKAGE_URL "http://www.gnu.org/software/libtool/" | | #define PACKAGE "libtool" | | #define VERSION "2.4.6" | | #define STDC_HEADERS 1 | | #define HAVE_SYS_TYPES_H 1 | | #define HAVE_SYS_STAT_H 1 | | #define HAVE_STDLIB_H 1 | | #define HAVE_STRING_H 1 | | #define HAVE_MEMORY_H 1 | | #define HAVE_STRINGS_H 1 | | #define HAVE_INTTYPES_H 1 | | #define HAVE_STDINT_H 1 | | #define HAVE_UNISTD_H 1 | | #define HAVE_DLFCN_H 1 | | #define LT_OBJDIR ".libs/" | | /* end confdefs.h. */ | | | | /* Override any GCC internal prototype to avoid an error. | | Use char because int might match the return type of a GCC | | builtin and then its argument prototype would still apply. */ | | #ifdef __cplusplus | | extern "C" | | #endif | | char shl_load (); | | int | | main () | | { | | return shl_load (); | | ; | | return 0; | | } | configure:12765: result: no | configure:12770: checking for dlopen | configure:12770: gcc -o conftest -g -O2 conftest.c >&5 | /tmp/ccLR4vHY.o: In function `main': | /home/ittipat/src/libtool-2.4.6/conftest.c:57: undefined reference to `dlopen' | collect2: ld returned 1 exit status | configure:12770: $? = 1 | configure: failed program was: | | /* confdefs.h */ | | #define PACKAGE_NAME "GNU Libtool" | | #define PACKAGE_TARNAME "libtool" | | #define PACKAGE_VERSION "2.4.6" | | #define PACKAGE_STRING "GNU Libtool 2.4.6" | | #define PACKAGE_BUGREPORT "address@hidden" | | #define PACKAGE_URL "http://www.gnu.org/software/libtool/" | | #define PACKAGE "libtool" | | #define VERSION "2.4.6" | | #define STDC_HEADERS 1 | | #define HAVE_SYS_TYPES_H 1 | | #define HAVE_SYS_STAT_H 1 | | #define HAVE_STDLIB_H 1 | | #define HAVE_STRING_H 1 | | #define HAVE_MEMORY_H 1 | | #define HAVE_STRINGS_H 1 | | #define HAVE_INTTYPES_H 1 | | #define HAVE_STDINT_H 1 | | #define HAVE_UNISTD_H 1 | | #define HAVE_DLFCN_H 1 | | #define LT_OBJDIR ".libs/" | | /* end confdefs.h. */ | | /* Define dlopen to an innocuous variant, in case declares dlopen. | | For example, HP-UX 11i declares gettimeofday. */ | | #define dlopen innocuous_dlopen | | | | /* System header to define __stub macros and hopefully few prototypes, | | which can conflict with char dlopen (); below. | | Prefer to if __STDC__ is defined, since | | exists even on freestanding compilers. */ | | | | #ifdef __STDC__ | | # include | | #else | | # include | | #endif | | | | #undef dlopen | | | | /* Override any GCC internal prototype to avoid an error. | | Use char because int might match the return type of a GCC | | builtin and then its argument prototype would still apply. */ | | #ifdef __cplusplus | | extern "C" | | #endif | | char dlopen (); | | /* The GNU C library defines this for functions which it implements | | to always fail with ENOSYS. Some functions are actually named | | something starting with __ and the normal name is an alias. */ | | #if defined __stub_dlopen || defined __stub___dlopen | | choke me | | #endif | | | | int | | main () | | { | | return dlopen (); | | ; | | return 0; | | } | configure:12770: result: no | configure:12774: checking for dlopen in -ldl | configure:12799: gcc -o conftest -g -O2 conftest.c -ldl >&5 | configure:12799: $? = 0 | configure:12808: result: yes | configure:12927: checking whether a program can dlopen itself | configure:13007: gcc -o conftest -g -O2 -DHAVE_DLFCN_H -Wl,--export-dynamic conftest.c -ldl >&5 | configure:13010: $? = 0 | configure:13028: result: yes | configure:13033: checking whether a statically linked program can dlopen itself | configure:13113: gcc -o conftest -g -O2 -DHAVE_DLFCN_H -Wl,--export-dynamic -static conftest.c -ldl >&5 | /tmp/cczzYe66.o: In function `main': | /home/ittipat/src/libtool-2.4.6/configure:13092: warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking | /usr/bin/ld: dynamic STT_GNU_IFUNC symbol `strcmp' with pointer equality in `/usr/lib/gcc/x86_64-redhat-linux/4.4.7/../../../../lib64/libc.a(strcmp.o)' can not be used when making an executable; recompile with -fPIE and relink with -pie | collect2: ld returned 1 exit status | configure:13116: $? = 1 | configure:13134: result: no | configure:13173: checking whether stripping libraries is possible | configure:13178: result: yes | configure:13213: checking if libtool supports shared libraries | configure:13215: result: yes | configure:13218: checking whether to build shared libraries | configure:13243: result: yes | configure:13246: checking whether to build static libraries | configure:13250: result: yes | configure:13288: checking what extension is used for runtime loadable modules | configure:13300: result: .so | configure:13324: checking what variable specifies run-time module search path | configure:13331: result: LD_LIBRARY_PATH | configure:13341: checking for the default library search path | configure:13348: result: /lib /usr/lib /usr/lib64/atlas /opt/bio/ncbi/lib/ /opt/bio/EMBOSS/lib/ /opt/bio/glimmer/lib/ /opt/bio/gromacs/lib/ /opt/bio/tigr/obj/ /opt/bio/wgs/lib /usr/lib64/cernlib/2006/lib /opt/mellanox/fca/lib /lib /lib64 /usr/lib /usr/lib64 /opt/rocks/lib /opt/ganglia/lib64 /opt/ibutils/lib64 /opt/mellanox/libibprof/lib /opt/mellanox/mxm/lib /usr/lib64/mysql /usr/lib64/octave/3.4.3 /usr/lib64/papi-4.1.3 /usr/lib64/papi-5.1.1/usr/lib /opt/pdsh/lib/pdsh /usr/pgsql-9.5/lib/ /usr/lib64/qt-3.3/lib /usr/lib64/xulrunner /lib64 /usr/lib64 /usr/kerberos/lib64 | configure:13379: checking for library containing dlopen | configure:13410: gcc -o conftest -g -O2 conftest.c >&5 | /tmp/ccxOph4b.o: In function `main': | /home/ittipat/src/libtool-2.4.6/conftest.c:37: undefined reference to `dlopen' | collect2: ld returned 1 exit status | configure:13410: $? = 1 | configure: failed program was: | | /* confdefs.h */ | | #define PACKAGE_NAME "GNU Libtool" | | #define PACKAGE_TARNAME "libtool" | | #define PACKAGE_VERSION "2.4.6" | | #define PACKAGE_STRING "GNU Libtool 2.4.6" | | #define PACKAGE_BUGREPORT "address@hidden" | | #define PACKAGE_URL "http://www.gnu.org/software/libtool/" | | #define PACKAGE "libtool" | | #define VERSION "2.4.6" | | #define STDC_HEADERS 1 | | #define HAVE_SYS_TYPES_H 1 | | #define HAVE_SYS_STAT_H 1 | | #define HAVE_STDLIB_H 1 | | #define HAVE_STRING_H 1 | | #define HAVE_MEMORY_H 1 | | #define HAVE_STRINGS_H 1 | | #define HAVE_INTTYPES_H 1 | | #define HAVE_STDINT_H 1 | | #define HAVE_UNISTD_H 1 | | #define HAVE_DLFCN_H 1 | | #define LT_OBJDIR ".libs/" | | #define LT_MODULE_EXT ".so" | | #define LT_MODULE_PATH_VAR "LD_LIBRARY_PATH" | | #define LT_DLSEARCH_PATH "/lib:/usr/lib:/usr/lib64/atlas:/opt/bio/ncbi/lib/:/opt/bio/EMBOSS/lib/:/opt/bio/glimmer/lib/:/opt/bio/gromacs/lib/:/opt/bio/tigr/obj/:/opt/bio/wgs/lib:/usr/lib64/cernlib/2006/lib:/opt/mellanox/fca/lib:/lib:/lib64:/usr/lib:/usr/lib64:/opt/rocks/lib:/opt/ganglia/lib64:/opt/ibutils/lib64:/opt/mellanox/libibprof/lib:/opt/mellanox/mxm/lib:/usr/lib64/mysql:/usr/lib64/octave/3.4.3:/usr/lib64/papi-4.1.3:/usr/lib64/papi-5.1.1/usr/lib:/opt/pdsh/lib/pdsh:/usr/pgsql-9.5/lib/:/usr/lib64/qt-3.3/lib:/usr/lib64/xulrunner:/lib64:/usr/lib64:/usr/kerberos/lib64" | | /* end confdefs.h. */ | | | | /* Override any GCC internal prototype to avoid an error. | | Use char because int might match the return type of a GCC | | builtin and then its argument prototype would still apply. */ | | #ifdef __cplusplus | | extern "C" | | #endif | | char dlopen (); | | int | | main () | | { | | return dlopen (); | | ; | | return 0; | | } | configure:13410: gcc -o conftest -g -O2 conftest.c -ldl >&5 | configure:13410: $? = 0 | configure:13427: result: -ldl | configure:13517: checking for dlerror | configure:13517: gcc -o conftest -g -O2 conftest.c -ldl -ldl >&5 | configure:13517: $? = 0 | configure:13517: result: yes | configure:13531: checking for shl_load | configure:13531: result: no | configure:13538: checking for shl_load in -ldld | configure:13572: result: no | configure:13618: checking for dld_link in -ldld | configure:13643: gcc -o conftest -g -O2 conftest.c -ldld -ldl >&5 | /usr/bin/ld: cannot find -ldld | collect2: ld returned 1 exit status | configure:13643: $? = 1 | configure: failed program was: | | /* confdefs.h */ | | #define PACKAGE_NAME "GNU Libtool" | | #define PACKAGE_TARNAME "libtool" | | #define PACKAGE_VERSION "2.4.6" | | #define PACKAGE_STRING "GNU Libtool 2.4.6" | | #define PACKAGE_BUGREPORT "address@hidden" | | #define PACKAGE_URL "http://www.gnu.org/software/libtool/" | | #define PACKAGE "libtool" | | #define VERSION "2.4.6" | | #define STDC_HEADERS 1 | | #define HAVE_SYS_TYPES_H 1 | | #define HAVE_SYS_STAT_H 1 | | #define HAVE_STDLIB_H 1 | | #define HAVE_STRING_H 1 | | #define HAVE_MEMORY_H 1 | | #define HAVE_STRINGS_H 1 | | #define HAVE_INTTYPES_H 1 | | #define HAVE_STDINT_H 1 | | #define HAVE_UNISTD_H 1 | | #define HAVE_DLFCN_H 1 | | #define LT_OBJDIR ".libs/" | | #define LT_MODULE_EXT ".so" | | #define LT_MODULE_PATH_VAR "LD_LIBRARY_PATH" | | #define LT_DLSEARCH_PATH "/lib:/usr/lib:/usr/lib64/atlas:/opt/bio/ncbi/lib/:/opt/bio/EMBOSS/lib/:/opt/bio/glimmer/lib/:/opt/bio/gromacs/lib/:/opt/bio/tigr/obj/:/opt/bio/wgs/lib:/usr/lib64/cernlib/2006/lib:/opt/mellanox/fca/lib:/lib:/lib64:/usr/lib:/usr/lib64:/opt/rocks/lib:/opt/ganglia/lib64:/opt/ibutils/lib64:/opt/mellanox/libibprof/lib:/opt/mellanox/mxm/lib:/usr/lib64/mysql:/usr/lib64/octave/3.4.3:/usr/lib64/papi-4.1.3:/usr/lib64/papi-5.1.1/usr/lib:/opt/pdsh/lib/pdsh:/usr/pgsql-9.5/lib/:/usr/lib64/qt-3.3/lib:/usr/lib64/xulrunner:/lib64:/usr/lib64:/usr/kerberos/lib64" | | #define HAVE_LIBDL 1 | | #define HAVE_DLERROR 1 | | /* end confdefs.h. */ | | | | /* Override any GCC internal prototype to avoid an error. | | Use char because int might match the return type of a GCC | | builtin and then its argument prototype would still apply. */ | | #ifdef __cplusplus | | extern "C" | | #endif | | char dld_link (); | | int | | main () | | { | | return dld_link (); | | ; | | return 0; | | } | configure:13652: result: no | configure:13687: checking for _ prefix in compiled symbols | configure:13697: gcc -c -g -O2 conftest.c >&5 | configure:13700: $? = 0 | configure:13704: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm | configure:13707: $? = 0 | configure:13729: result: no | configure:13846: checking whether deplibs are loaded by dlopen | configure:13943: result: yes | configure:13954: checking for argz.h | configure:13954: gcc -c -g -O2 conftest.c >&5 | configure:13954: $? = 0 | configure:13954: result: yes | configure:13966: checking for error_t | configure:13966: gcc -c -g -O2 conftest.c >&5 | configure:13966: $? = 0 | configure:13966: gcc -c -g -O2 conftest.c >&5 | conftest.c: In function 'main': | conftest.c:37: error: expected expression before ')' token | configure:13966: $? = 1 | configure: failed program was: | | /* confdefs.h */ | | #define PACKAGE_NAME "GNU Libtool" | | #define PACKAGE_TARNAME "libtool" | | #define PACKAGE_VERSION "2.4.6" | | #define PACKAGE_STRING "GNU Libtool 2.4.6" | | #define PACKAGE_BUGREPORT "address@hidden" | | #define PACKAGE_URL "http://www.gnu.org/software/libtool/" | | #define PACKAGE "libtool" | | #define VERSION "2.4.6" | | #define STDC_HEADERS 1 | | #define HAVE_SYS_TYPES_H 1 | | #define HAVE_SYS_STAT_H 1 | | #define HAVE_STDLIB_H 1 | | #define HAVE_STRING_H 1 | | #define HAVE_MEMORY_H 1 | | #define HAVE_STRINGS_H 1 | | #define HAVE_INTTYPES_H 1 | | #define HAVE_STDINT_H 1 | | #define HAVE_UNISTD_H 1 | | #define HAVE_DLFCN_H 1 | | #define LT_OBJDIR ".libs/" | | #define LT_MODULE_EXT ".so" | | #define LT_MODULE_PATH_VAR "LD_LIBRARY_PATH" | | #define LT_DLSEARCH_PATH "/lib:/usr/lib:/usr/lib64/atlas:/opt/bio/ncbi/lib/:/opt/bio/EMBOSS/lib/:/opt/bio/glimmer/lib/:/opt/bio/gromacs/lib/:/opt/bio/tigr/obj/:/opt/bio/wgs/lib:/usr/lib64/cernlib/2006/lib:/opt/mellanox/fca/lib:/lib:/lib64:/usr/lib:/usr/lib64:/opt/rocks/lib:/opt/ganglia/lib64:/opt/ibutils/lib64:/opt/mellanox/libibprof/lib:/opt/mellanox/mxm/lib:/usr/lib64/mysql:/usr/lib64/octave/3.4.3:/usr/lib64/papi-4.1.3:/usr/lib64/papi-5.1.1/usr/lib:/opt/pdsh/lib/pdsh:/usr/pgsql-9.5/lib/:/usr/lib64/qt-3.3/lib:/usr/lib64/xulrunner:/lib64:/usr/lib64:/usr/kerberos/lib64" | | #define HAVE_LIBDL 1 | | #define HAVE_DLERROR 1 | | #define HAVE_LIBDLLOADER 1 | | #define HAVE_ARGZ_H 1 | | /* end confdefs.h. */ | | #if defined(HAVE_ARGZ_H) | | # include | | #endif | | | | int | | main () | | { | | if (sizeof ((error_t))) | | return 0; | | ; | | return 0; | | } | configure:13966: result: yes | configure:13992: checking for argz_add | configure:13992: gcc -o conftest -g -O2 conftest.c >&5 | configure:13992: $? = 0 | configure:13992: result: yes | configure:13992: checking for argz_append | configure:13992: gcc -o conftest -g -O2 conftest.c >&5 | configure:13992: $? = 0 | configure:13992: result: yes | configure:13992: checking for argz_count | configure:13992: gcc -o conftest -g -O2 conftest.c >&5 | configure:13992: $? = 0 | configure:13992: result: yes | configure:13992: checking for argz_create_sep | configure:13992: gcc -o conftest -g -O2 conftest.c >&5 | configure:13992: $? = 0 | configure:13992: result: yes | configure:13992: checking for argz_insert | configure:13992: gcc -o conftest -g -O2 conftest.c >&5 | configure:13992: $? = 0 | configure:13992: result: yes | configure:13992: checking for argz_next | configure:13992: gcc -o conftest -g -O2 conftest.c >&5 | configure:13992: $? = 0 | configure:13992: result: yes | configure:13992: checking for argz_stringify | configure:13992: gcc -o conftest -g -O2 conftest.c >&5 | configure:13992: $? = 0 | configure:13992: result: yes | configure:14010: checking if argz actually works | configure:14041: result: yes | configure:14060: checking whether libtool supports -dlopen/-dlpreopen | configure:14072: result: yes | configure:14125: checking for unistd.h | configure:14125: result: yes | configure:14125: checking for dl.h | configure:14125: gcc -c -g -O2 conftest.c >&5 | conftest.c:75:16: error: dl.h: No such file or directory | configure:14125: $? = 1 | configure: failed program was: | | /* confdefs.h */ | | #define PACKAGE_NAME "GNU Libtool" | | #define PACKAGE_TARNAME "libtool" | | #define PACKAGE_VERSION "2.4.6" | | #define PACKAGE_STRING "GNU Libtool 2.4.6" | | #define PACKAGE_BUGREPORT "address@hidden" | | #define PACKAGE_URL "http://www.gnu.org/software/libtool/" | | #define PACKAGE "libtool" | | #define VERSION "2.4.6" | | #define STDC_HEADERS 1 | | #define HAVE_SYS_TYPES_H 1 | | #define HAVE_SYS_STAT_H 1 | | #define HAVE_STDLIB_H 1 | | #define HAVE_STRING_H 1 | | #define HAVE_MEMORY_H 1 | | #define HAVE_STRINGS_H 1 | | #define HAVE_INTTYPES_H 1 | | #define HAVE_STDINT_H 1 | | #define HAVE_UNISTD_H 1 | | #define HAVE_DLFCN_H 1 | | #define LT_OBJDIR ".libs/" | | #define LT_MODULE_EXT ".so" | | #define LT_MODULE_PATH_VAR "LD_LIBRARY_PATH" | | #define LT_DLSEARCH_PATH "/lib:/usr/lib:/usr/lib64/atlas:/opt/bio/ncbi/lib/:/opt/bio/EMBOSS/lib/:/opt/bio/glimmer/lib/:/opt/bio/gromacs/lib/:/opt/bio/tigr/obj/:/opt/bio/wgs/lib:/usr/lib64/cernlib/2006/lib:/opt/mellanox/fca/lib:/lib:/lib64:/usr/lib:/usr/lib64:/opt/rocks/lib:/opt/ganglia/lib64:/opt/ibutils/lib64:/opt/mellanox/libibprof/lib:/opt/mellanox/mxm/lib:/usr/lib64/mysql:/usr/lib64/octave/3.4.3:/usr/lib64/papi-4.1.3:/usr/lib64/papi-5.1.1/usr/lib:/opt/pdsh/lib/pdsh:/usr/pgsql-9.5/lib/:/usr/lib64/qt-3.3/lib:/usr/lib64/xulrunner:/lib64:/usr/lib64:/usr/kerberos/lib64" | | #define HAVE_LIBDL 1 | | #define HAVE_DLERROR 1 | | #define HAVE_LIBDLLOADER 1 | | #define HAVE_ARGZ_H 1 | | #define HAVE_ERROR_T 1 | | #define HAVE_ARGZ_ADD 1 | | #define HAVE_ARGZ_APPEND 1 | | #define HAVE_ARGZ_COUNT 1 | | #define HAVE_ARGZ_CREATE_SEP 1 | | #define HAVE_ARGZ_INSERT 1 | | #define HAVE_ARGZ_NEXT 1 | | #define HAVE_ARGZ_STRINGIFY 1 | | #define HAVE_WORKING_ARGZ 1 | | #define HAVE_PRELOADED_SYMBOLS 1 | | #define HAVE_UNISTD_H 1 | | /* end confdefs.h. */ | | #include | | #ifdef HAVE_SYS_TYPES_H | | # include | | #endif | | #ifdef HAVE_SYS_STAT_H | | # include | | #endif | | #ifdef STDC_HEADERS | | # include | | # include | | #else | | # ifdef HAVE_STDLIB_H | | # include | | # endif | | #endif | | #ifdef HAVE_STRING_H | | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | | # include | | # endif | | # include | | #endif | | #ifdef HAVE_STRINGS_H | | # include | | #endif | | #ifdef HAVE_INTTYPES_H | | # include | | #endif | | #ifdef HAVE_STDINT_H | | # include | | #endif | | #ifdef HAVE_UNISTD_H | | # include | | #endif | | | | #include | configure:14125: result: no | configure:14125: checking for sys/dl.h | configure:14125: gcc -c -g -O2 conftest.c >&5 | conftest.c:75:20: error: sys/dl.h: No such file or directory | configure:14125: $? = 1 | configure: failed program was: | | /* confdefs.h */ | | #define PACKAGE_NAME "GNU Libtool" | | #define PACKAGE_TARNAME "libtool" | | #define PACKAGE_VERSION "2.4.6" | | #define PACKAGE_STRING "GNU Libtool 2.4.6" | | #define PACKAGE_BUGREPORT "address@hidden" | | #define PACKAGE_URL "http://www.gnu.org/software/libtool/" | | #define PACKAGE "libtool" | | #define VERSION "2.4.6" | | #define STDC_HEADERS 1 | | #define HAVE_SYS_TYPES_H 1 | | #define HAVE_SYS_STAT_H 1 | | #define HAVE_STDLIB_H 1 | | #define HAVE_STRING_H 1 | | #define HAVE_MEMORY_H 1 | | #define HAVE_STRINGS_H 1 | | #define HAVE_INTTYPES_H 1 | | #define HAVE_STDINT_H 1 | | #define HAVE_UNISTD_H 1 | | #define HAVE_DLFCN_H 1 | | #define LT_OBJDIR ".libs/" | | #define LT_MODULE_EXT ".so" | | #define LT_MODULE_PATH_VAR "LD_LIBRARY_PATH" | | #define LT_DLSEARCH_PATH "/lib:/usr/lib:/usr/lib64/atlas:/opt/bio/ncbi/lib/:/opt/bio/EMBOSS/lib/:/opt/bio/glimmer/lib/:/opt/bio/gromacs/lib/:/opt/bio/tigr/obj/:/opt/bio/wgs/lib:/usr/lib64/cernlib/2006/lib:/opt/mellanox/fca/lib:/lib:/lib64:/usr/lib:/usr/lib64:/opt/rocks/lib:/opt/ganglia/lib64:/opt/ibutils/lib64:/opt/mellanox/libibprof/lib:/opt/mellanox/mxm/lib:/usr/lib64/mysql:/usr/lib64/octave/3.4.3:/usr/lib64/papi-4.1.3:/usr/lib64/papi-5.1.1/usr/lib:/opt/pdsh/lib/pdsh:/usr/pgsql-9.5/lib/:/usr/lib64/qt-3.3/lib:/usr/lib64/xulrunner:/lib64:/usr/lib64:/usr/kerberos/lib64" | | #define HAVE_LIBDL 1 | | #define HAVE_DLERROR 1 | | #define HAVE_LIBDLLOADER 1 | | #define HAVE_ARGZ_H 1 | | #define HAVE_ERROR_T 1 | | #define HAVE_ARGZ_ADD 1 | | #define HAVE_ARGZ_APPEND 1 | | #define HAVE_ARGZ_COUNT 1 | | #define HAVE_ARGZ_CREATE_SEP 1 | | #define HAVE_ARGZ_INSERT 1 | | #define HAVE_ARGZ_NEXT 1 | | #define HAVE_ARGZ_STRINGIFY 1 | | #define HAVE_WORKING_ARGZ 1 | | #define HAVE_PRELOADED_SYMBOLS 1 | | #define HAVE_UNISTD_H 1 | | /* end confdefs.h. */ | | #include | | #ifdef HAVE_SYS_TYPES_H | | # include | | #endif | | #ifdef HAVE_SYS_STAT_H | | # include | | #endif | | #ifdef STDC_HEADERS | | # include | | # include | | #else | | # ifdef HAVE_STDLIB_H | | # include | | # endif | | #endif | | #ifdef HAVE_STRING_H | | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | | # include | | # endif | | # include | | #endif | | #ifdef HAVE_STRINGS_H | | # include | | #endif | | #ifdef HAVE_INTTYPES_H | | # include | | #endif | | #ifdef HAVE_STDINT_H | | # include | | #endif | | #ifdef HAVE_UNISTD_H | | # include | | #endif | | | | #include | configure:14125: result: no | configure:14125: checking for dld.h | configure:14125: gcc -c -g -O2 conftest.c >&5 | conftest.c:75:17: error: dld.h: No such file or directory | configure:14125: $? = 1 | configure: failed program was: | | /* confdefs.h */ | | #define PACKAGE_NAME "GNU Libtool" | | #define PACKAGE_TARNAME "libtool" | | #define PACKAGE_VERSION "2.4.6" | | #define PACKAGE_STRING "GNU Libtool 2.4.6" | | #define PACKAGE_BUGREPORT "address@hidden" | | #define PACKAGE_URL "http://www.gnu.org/software/libtool/" | | #define PACKAGE "libtool" | | #define VERSION "2.4.6" | | #define STDC_HEADERS 1 | | #define HAVE_SYS_TYPES_H 1 | | #define HAVE_SYS_STAT_H 1 | | #define HAVE_STDLIB_H 1 | | #define HAVE_STRING_H 1 | | #define HAVE_MEMORY_H 1 | | #define HAVE_STRINGS_H 1 | | #define HAVE_INTTYPES_H 1 | | #define HAVE_STDINT_H 1 | | #define HAVE_UNISTD_H 1 | | #define HAVE_DLFCN_H 1 | | #define LT_OBJDIR ".libs/" | | #define LT_MODULE_EXT ".so" | | #define LT_MODULE_PATH_VAR "LD_LIBRARY_PATH" | | #define LT_DLSEARCH_PATH "/lib:/usr/lib:/usr/lib64/atlas:/opt/bio/ncbi/lib/:/opt/bio/EMBOSS/lib/:/opt/bio/glimmer/lib/:/opt/bio/gromacs/lib/:/opt/bio/tigr/obj/:/opt/bio/wgs/lib:/usr/lib64/cernlib/2006/lib:/opt/mellanox/fca/lib:/lib:/lib64:/usr/lib:/usr/lib64:/opt/rocks/lib:/opt/ganglia/lib64:/opt/ibutils/lib64:/opt/mellanox/libibprof/lib:/opt/mellanox/mxm/lib:/usr/lib64/mysql:/usr/lib64/octave/3.4.3:/usr/lib64/papi-4.1.3:/usr/lib64/papi-5.1.1/usr/lib:/opt/pdsh/lib/pdsh:/usr/pgsql-9.5/lib/:/usr/lib64/qt-3.3/lib:/usr/lib64/xulrunner:/lib64:/usr/lib64:/usr/kerberos/lib64" | | #define HAVE_LIBDL 1 | | #define HAVE_DLERROR 1 | | #define HAVE_LIBDLLOADER 1 | | #define HAVE_ARGZ_H 1 | | #define HAVE_ERROR_T 1 | | #define HAVE_ARGZ_ADD 1 | | #define HAVE_ARGZ_APPEND 1 | | #define HAVE_ARGZ_COUNT 1 | | #define HAVE_ARGZ_CREATE_SEP 1 | | #define HAVE_ARGZ_INSERT 1 | | #define HAVE_ARGZ_NEXT 1 | | #define HAVE_ARGZ_STRINGIFY 1 | | #define HAVE_WORKING_ARGZ 1 | | #define HAVE_PRELOADED_SYMBOLS 1 | | #define HAVE_UNISTD_H 1 | | /* end confdefs.h. */ | | #include | | #ifdef HAVE_SYS_TYPES_H | | # include | | #endif | | #ifdef HAVE_SYS_STAT_H | | # include | | #endif | | #ifdef STDC_HEADERS | | # include | | # include | | #else | | # ifdef HAVE_STDLIB_H | | # include | | # endif | | #endif | | #ifdef HAVE_STRING_H | | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | | # include | | # endif | | # include | | #endif | | #ifdef HAVE_STRINGS_H | | # include | | #endif | | #ifdef HAVE_INTTYPES_H | | # include | | #endif | | #ifdef HAVE_STDINT_H | | # include | | #endif | | #ifdef HAVE_UNISTD_H | | # include | | #endif | | | | #include | configure:14125: result: no | configure:14125: checking for mach-o/dyld.h | configure:14125: gcc -c -g -O2 conftest.c >&5 | conftest.c:75:25: error: mach-o/dyld.h: No such file or directory | configure:14125: $? = 1 | configure: failed program was: | | /* confdefs.h */ | | #define PACKAGE_NAME "GNU Libtool" | | #define PACKAGE_TARNAME "libtool" | | #define PACKAGE_VERSION "2.4.6" | | #define PACKAGE_STRING "GNU Libtool 2.4.6" | | #define PACKAGE_BUGREPORT "address@hidden" | | #define PACKAGE_URL "http://www.gnu.org/software/libtool/" | | #define PACKAGE "libtool" | | #define VERSION "2.4.6" | | #define STDC_HEADERS 1 | | #define HAVE_SYS_TYPES_H 1 | | #define HAVE_SYS_STAT_H 1 | | #define HAVE_STDLIB_H 1 | | #define HAVE_STRING_H 1 | | #define HAVE_MEMORY_H 1 | | #define HAVE_STRINGS_H 1 | | #define HAVE_INTTYPES_H 1 | | #define HAVE_STDINT_H 1 | | #define HAVE_UNISTD_H 1 | | #define HAVE_DLFCN_H 1 | | #define LT_OBJDIR ".libs/" | | #define LT_MODULE_EXT ".so" | | #define LT_MODULE_PATH_VAR "LD_LIBRARY_PATH" | | #define LT_DLSEARCH_PATH "/lib:/usr/lib:/usr/lib64/atlas:/opt/bio/ncbi/lib/:/opt/bio/EMBOSS/lib/:/opt/bio/glimmer/lib/:/opt/bio/gromacs/lib/:/opt/bio/tigr/obj/:/opt/bio/wgs/lib:/usr/lib64/cernlib/2006/lib:/opt/mellanox/fca/lib:/lib:/lib64:/usr/lib:/usr/lib64:/opt/rocks/lib:/opt/ganglia/lib64:/opt/ibutils/lib64:/opt/mellanox/libibprof/lib:/opt/mellanox/mxm/lib:/usr/lib64/mysql:/usr/lib64/octave/3.4.3:/usr/lib64/papi-4.1.3:/usr/lib64/papi-5.1.1/usr/lib:/opt/pdsh/lib/pdsh:/usr/pgsql-9.5/lib/:/usr/lib64/qt-3.3/lib:/usr/lib64/xulrunner:/lib64:/usr/lib64:/usr/kerberos/lib64" | | #define HAVE_LIBDL 1 | | #define HAVE_DLERROR 1 | | #define HAVE_LIBDLLOADER 1 | | #define HAVE_ARGZ_H 1 | | #define HAVE_ERROR_T 1 | | #define HAVE_ARGZ_ADD 1 | | #define HAVE_ARGZ_APPEND 1 | | #define HAVE_ARGZ_COUNT 1 | | #define HAVE_ARGZ_CREATE_SEP 1 | | #define HAVE_ARGZ_INSERT 1 | | #define HAVE_ARGZ_NEXT 1 | | #define HAVE_ARGZ_STRINGIFY 1 | | #define HAVE_WORKING_ARGZ 1 | | #define HAVE_PRELOADED_SYMBOLS 1 | | #define HAVE_UNISTD_H 1 | | /* end confdefs.h. */ | | #include | | #ifdef HAVE_SYS_TYPES_H | | # include | | #endif | | #ifdef HAVE_SYS_STAT_H | | # include | | #endif | | #ifdef STDC_HEADERS | | # include | | # include | | #else | | # ifdef HAVE_STDLIB_H | | # include | | # endif | | #endif | | #ifdef HAVE_STRING_H | | # if !defined STDC_HEADERS && defined HAVE_MEMORY_H | | # include | | # endif | | # include | | #endif | | #ifdef HAVE_STRINGS_H | | # include | | #endif | | #ifdef HAVE_INTTYPES_H | | # include | | #endif | | #ifdef HAVE_STDINT_H | | # include | | #endif | | #ifdef HAVE_UNISTD_H | | # include | | #endif | | | | #include | configure:14125: result: no | configure:14125: checking for dirent.h | configure:14125: gcc -c -g -O2 conftest.c >&5 | configure:14125: $? = 0 | configure:14125: result: yes | configure:14140: checking for closedir | configure:14140: gcc -o conftest -g -O2 conftest.c >&5 | configure:14140: $? = 0 | configure:14140: result: yes | configure:14140: checking for opendir | configure:14140: gcc -o conftest -g -O2 conftest.c >&5 | configure:14140: $? = 0 | configure:14140: result: yes | configure:14140: checking for readdir | configure:14140: gcc -o conftest -g -O2 conftest.c >&5 | configure:14140: $? = 0 | configure:14140: result: yes | configure:14159: checking for strlcat | configure:14159: gcc -o conftest -g -O2 conftest.c >&5 | /tmp/cc9RlOWP.o: In function `main': | /home/ittipat/src/libtool-2.4.6/conftest.c:79: undefined reference to `strlcat' | collect2: ld returned 1 exit status | configure:14159: $? = 1 | configure: failed program was: | | /* confdefs.h */ | | #define PACKAGE_NAME "GNU Libtool" | | #define PACKAGE_TARNAME "libtool" | | #define PACKAGE_VERSION "2.4.6" | | #define PACKAGE_STRING "GNU Libtool 2.4.6" | | #define PACKAGE_BUGREPORT "address@hidden" | | #define PACKAGE_URL "http://www.gnu.org/software/libtool/" | | #define PACKAGE "libtool" | | #define VERSION "2.4.6" | | #define STDC_HEADERS 1 | | #define HAVE_SYS_TYPES_H 1 | | #define HAVE_SYS_STAT_H 1 | | #define HAVE_STDLIB_H 1 | | #define HAVE_STRING_H 1 | | #define HAVE_MEMORY_H 1 | | #define HAVE_STRINGS_H 1 | | #define HAVE_INTTYPES_H 1 | | #define HAVE_STDINT_H 1 | | #define HAVE_UNISTD_H 1 | | #define HAVE_DLFCN_H 1 | | #define LT_OBJDIR ".libs/" | | #define LT_MODULE_EXT ".so" | | #define LT_MODULE_PATH_VAR "LD_LIBRARY_PATH" | | #define LT_DLSEARCH_PATH "/lib:/usr/lib:/usr/lib64/atlas:/opt/bio/ncbi/lib/:/opt/bio/EMBOSS/lib/:/opt/bio/glimmer/lib/:/opt/bio/gromacs/lib/:/opt/bio/tigr/obj/:/opt/bio/wgs/lib:/usr/lib64/cernlib/2006/lib:/opt/mellanox/fca/lib:/lib:/lib64:/usr/lib:/usr/lib64:/opt/rocks/lib:/opt/ganglia/lib64:/opt/ibutils/lib64:/opt/mellanox/libibprof/lib:/opt/mellanox/mxm/lib:/usr/lib64/mysql:/usr/lib64/octave/3.4.3:/usr/lib64/papi-4.1.3:/usr/lib64/papi-5.1.1/usr/lib:/opt/pdsh/lib/pdsh:/usr/pgsql-9.5/lib/:/usr/lib64/qt-3.3/lib:/usr/lib64/xulrunner:/lib64:/usr/lib64:/usr/kerberos/lib64" | | #define HAVE_LIBDL 1 | | #define HAVE_DLERROR 1 | | #define HAVE_LIBDLLOADER 1 | | #define HAVE_ARGZ_H 1 | | #define HAVE_ERROR_T 1 | | #define HAVE_ARGZ_ADD 1 | | #define HAVE_ARGZ_APPEND 1 | | #define HAVE_ARGZ_COUNT 1 | | #define HAVE_ARGZ_CREATE_SEP 1 | | #define HAVE_ARGZ_INSERT 1 | | #define HAVE_ARGZ_NEXT 1 | | #define HAVE_ARGZ_STRINGIFY 1 | | #define HAVE_WORKING_ARGZ 1 | | #define HAVE_PRELOADED_SYMBOLS 1 | | #define HAVE_UNISTD_H 1 | | #define HAVE_DIRENT_H 1 | | #define HAVE_CLOSEDIR 1 | | #define HAVE_OPENDIR 1 | | #define HAVE_READDIR 1 | | /* end confdefs.h. */ | | /* Define strlcat to an innocuous variant, in case declares strlcat. | | For example, HP-UX 11i declares gettimeofday. */ | | #define strlcat innocuous_strlcat | | | | /* System header to define __stub macros and hopefully few prototypes, | | which can conflict with char strlcat (); below. | | Prefer to if __STDC__ is defined, since | | exists even on freestanding compilers. */ | | | | #ifdef __STDC__ | | # include | | #else | | # include | | #endif | | | | #undef strlcat | | | | /* Override any GCC internal prototype to avoid an error. | | Use char because int might match the return type of a GCC | | builtin and then its argument prototype would still apply. */ | | #ifdef __cplusplus | | extern "C" | | #endif | | char strlcat (); | | /* The GNU C library defines this for functions which it implements | | to always fail with ENOSYS. Some functions are actually named | | something starting with __ and the normal name is an alias. */ | | #if defined __stub_strlcat || defined __stub___strlcat | | choke me | | #endif | | | | int | | main () | | { | | return strlcat (); | | ; | | return 0; | | } | configure:14159: result: no | configure:14159: checking for strlcpy | configure:14159: gcc -o conftest -g -O2 conftest.c >&5 | /tmp/cceyxMoS.o: In function `main': | /home/ittipat/src/libtool-2.4.6/conftest.c:79: undefined reference to `strlcpy' | collect2: ld returned 1 exit status | configure:14159: $? = 1 | configure: failed program was: | | /* confdefs.h */ | | #define PACKAGE_NAME "GNU Libtool" | | #define PACKAGE_TARNAME "libtool" | | #define PACKAGE_VERSION "2.4.6" | | #define PACKAGE_STRING "GNU Libtool 2.4.6" | | #define PACKAGE_BUGREPORT "address@hidden" | | #define PACKAGE_URL "http://www.gnu.org/software/libtool/" | | #define PACKAGE "libtool" | | #define VERSION "2.4.6" | | #define STDC_HEADERS 1 | | #define HAVE_SYS_TYPES_H 1 | | #define HAVE_SYS_STAT_H 1 | | #define HAVE_STDLIB_H 1 | | #define HAVE_STRING_H 1 | | #define HAVE_MEMORY_H 1 | | #define HAVE_STRINGS_H 1 | | #define HAVE_INTTYPES_H 1 | | #define HAVE_STDINT_H 1 | | #define HAVE_UNISTD_H 1 | | #define HAVE_DLFCN_H 1 | | #define LT_OBJDIR ".libs/" | | #define LT_MODULE_EXT ".so" | | #define LT_MODULE_PATH_VAR "LD_LIBRARY_PATH" | | #define LT_DLSEARCH_PATH "/lib:/usr/lib:/usr/lib64/atlas:/opt/bio/ncbi/lib/:/opt/bio/EMBOSS/lib/:/opt/bio/glimmer/lib/:/opt/bio/gromacs/lib/:/opt/bio/tigr/obj/:/opt/bio/wgs/lib:/usr/lib64/cernlib/2006/lib:/opt/mellanox/fca/lib:/lib:/lib64:/usr/lib:/usr/lib64:/opt/rocks/lib:/opt/ganglia/lib64:/opt/ibutils/lib64:/opt/mellanox/libibprof/lib:/opt/mellanox/mxm/lib:/usr/lib64/mysql:/usr/lib64/octave/3.4.3:/usr/lib64/papi-4.1.3:/usr/lib64/papi-5.1.1/usr/lib:/opt/pdsh/lib/pdsh:/usr/pgsql-9.5/lib/:/usr/lib64/qt-3.3/lib:/usr/lib64/xulrunner:/lib64:/usr/lib64:/usr/kerberos/lib64" | | #define HAVE_LIBDL 1 | | #define HAVE_DLERROR 1 | | #define HAVE_LIBDLLOADER 1 | | #define HAVE_ARGZ_H 1 | | #define HAVE_ERROR_T 1 | | #define HAVE_ARGZ_ADD 1 | | #define HAVE_ARGZ_APPEND 1 | | #define HAVE_ARGZ_COUNT 1 | | #define HAVE_ARGZ_CREATE_SEP 1 | | #define HAVE_ARGZ_INSERT 1 | | #define HAVE_ARGZ_NEXT 1 | | #define HAVE_ARGZ_STRINGIFY 1 | | #define HAVE_WORKING_ARGZ 1 | | #define HAVE_PRELOADED_SYMBOLS 1 | | #define HAVE_UNISTD_H 1 | | #define HAVE_DIRENT_H 1 | | #define HAVE_CLOSEDIR 1 | | #define HAVE_OPENDIR 1 | | #define HAVE_READDIR 1 | | /* end confdefs.h. */ | | /* Define strlcpy to an innocuous variant, in case declares strlcpy. | | For example, HP-UX 11i declares gettimeofday. */ | | #define strlcpy innocuous_strlcpy | | | | /* System header to define __stub macros and hopefully few prototypes, | | which can conflict with char strlcpy (); below. | | Prefer to if __STDC__ is defined, since | | exists even on freestanding compilers. */ | | | | #ifdef __STDC__ | | # include | | #else | | # include | | #endif | | | | #undef strlcpy | | | | /* Override any GCC internal prototype to avoid an error. | | Use char because int might match the return type of a GCC | | builtin and then its argument prototype would still apply. */ | | #ifdef __cplusplus | | extern "C" | | #endif | | char strlcpy (); | | /* The GNU C library defines this for functions which it implements | | to always fail with ENOSYS. Some functions are actually named | | something starting with __ and the normal name is an alias. */ | | #if defined __stub_strlcpy || defined __stub___strlcpy | | choke me | | #endif | | | | int | | main () | | { | | return strlcpy (); | | ; | | return 0; | | } | configure:14159: result: no | configure:14254: checking for g++ | configure:14270: found /usr/bin/g++ | configure:14281: result: g++ | configure:14308: checking for C++ compiler version | configure:14317: g++ --version >&5 | g++ (GCC) 4.4.7 20120313 (Red Hat 4.4.7-4) | Copyright (C) 2010 Free Software Foundation, Inc. | This is free software; see the source for copying conditions. There is NO | warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. | | configure:14328: $? = 0 | configure:14317: g++ -v >&5 | Using built-in specs. | Target: x86_64-redhat-linux | Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre --enable-libgcj-multifile --enable-java-maintainer-mode --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --disable-libjava-multilib --with-ppl --with-cloog --with-tune=generic --with-arch_32=i686 --build=x86_64-redhat-linux | Thread model: posix | gcc version 4.4.7 20120313 (Red Hat 4.4.7-4) (GCC) | configure:14328: $? = 0 | configure:14317: g++ -V >&5 | g++: '-V' option must have argument | configure:14328: $? = 1 | configure:14317: g++ -qversion >&5 | g++: unrecognized option '-qversion' | g++: no input files | configure:14328: $? = 1 | configure:14332: checking whether we are using the GNU C++ compiler | configure:14351: g++ -c conftest.cpp >&5 | configure:14351: $? = 0 | configure:14360: result: yes | configure:14369: checking whether g++ accepts -g | configure:14389: g++ -c -g conftest.cpp >&5 | configure:14389: $? = 0 | configure:14430: result: yes | configure:14455: checking dependency style of g++ | configure:14566: result: gcc3 | configure:14600: checking how to run the C++ preprocessor | configure:14627: g++ -E conftest.cpp | configure:14627: $? = 0 | configure:14641: g++ -E conftest.cpp | conftest.cpp:47:28: error: ac_nonexistent.h: No such file or directory | configure:14641: $? = 1 | configure: failed program was: | | /* confdefs.h */ | | #define PACKAGE_NAME "GNU Libtool" | | #define PACKAGE_TARNAME "libtool" | | #define PACKAGE_VERSION "2.4.6" | | #define PACKAGE_STRING "GNU Libtool 2.4.6" | | #define PACKAGE_BUGREPORT "address@hidden" | | #define PACKAGE_URL "http://www.gnu.org/software/libtool/" | | #define PACKAGE "libtool" | | #define VERSION "2.4.6" | | #define STDC_HEADERS 1 | | #define HAVE_SYS_TYPES_H 1 | | #define HAVE_SYS_STAT_H 1 | | #define HAVE_STDLIB_H 1 | | #define HAVE_STRING_H 1 | | #define HAVE_MEMORY_H 1 | | #define HAVE_STRINGS_H 1 | | #define HAVE_INTTYPES_H 1 | | #define HAVE_STDINT_H 1 | | #define HAVE_UNISTD_H 1 | | #define HAVE_DLFCN_H 1 | | #define LT_OBJDIR ".libs/" | | #define LT_MODULE_EXT ".so" | | #define LT_MODULE_PATH_VAR "LD_LIBRARY_PATH" | | #define LT_DLSEARCH_PATH "/lib:/usr/lib:/usr/lib64/atlas:/opt/bio/ncbi/lib/:/opt/bio/EMBOSS/lib/:/opt/bio/glimmer/lib/:/opt/bio/gromacs/lib/:/opt/bio/tigr/obj/:/opt/bio/wgs/lib:/usr/lib64/cernlib/2006/lib:/opt/mellanox/fca/lib:/lib:/lib64:/usr/lib:/usr/lib64:/opt/rocks/lib:/opt/ganglia/lib64:/opt/ibutils/lib64:/opt/mellanox/libibprof/lib:/opt/mellanox/mxm/lib:/usr/lib64/mysql:/usr/lib64/octave/3.4.3:/usr/lib64/papi-4.1.3:/usr/lib64/papi-5.1.1/usr/lib:/opt/pdsh/lib/pdsh:/usr/pgsql-9.5/lib/:/usr/lib64/qt-3.3/lib:/usr/lib64/xulrunner:/lib64:/usr/lib64:/usr/kerberos/lib64" | | #define HAVE_LIBDL 1 | | #define HAVE_DLERROR 1 | | #define HAVE_LIBDLLOADER 1 | | #define HAVE_ARGZ_H 1 | | #define HAVE_ERROR_T 1 | | #define HAVE_ARGZ_ADD 1 | | #define HAVE_ARGZ_APPEND 1 | | #define HAVE_ARGZ_COUNT 1 | | #define HAVE_ARGZ_CREATE_SEP 1 | | #define HAVE_ARGZ_INSERT 1 | | #define HAVE_ARGZ_NEXT 1 | | #define HAVE_ARGZ_STRINGIFY 1 | | #define HAVE_WORKING_ARGZ 1 | | #define HAVE_PRELOADED_SYMBOLS 1 | | #define HAVE_UNISTD_H 1 | | #define HAVE_DIRENT_H 1 | | #define HAVE_CLOSEDIR 1 | | #define HAVE_OPENDIR 1 | | #define HAVE_READDIR 1 | | #define LT_LIBEXT "a" | | #define LT_LIBPREFIX "lib" | | /* end confdefs.h. */ | | #include | configure:14666: result: g++ -E | configure:14686: g++ -E conftest.cpp | configure:14686: $? = 0 | configure:14700: g++ -E conftest.cpp | conftest.cpp:47:28: error: ac_nonexistent.h: No such file or directory | configure:14700: $? = 1 | configure: failed program was: | | /* confdefs.h */ | | #define PACKAGE_NAME "GNU Libtool" | | #define PACKAGE_TARNAME "libtool" | | #define PACKAGE_VERSION "2.4.6" | | #define PACKAGE_STRING "GNU Libtool 2.4.6" | | #define PACKAGE_BUGREPORT "address@hidden" | | #define PACKAGE_URL "http://www.gnu.org/software/libtool/" | | #define PACKAGE "libtool" | | #define VERSION "2.4.6" | | #define STDC_HEADERS 1 | | #define HAVE_SYS_TYPES_H 1 | | #define HAVE_SYS_STAT_H 1 | | #define HAVE_STDLIB_H 1 | | #define HAVE_STRING_H 1 | | #define HAVE_MEMORY_H 1 | | #define HAVE_STRINGS_H 1 | | #define HAVE_INTTYPES_H 1 | | #define HAVE_STDINT_H 1 | | #define HAVE_UNISTD_H 1 | | #define HAVE_DLFCN_H 1 | | #define LT_OBJDIR ".libs/" | | #define LT_MODULE_EXT ".so" | | #define LT_MODULE_PATH_VAR "LD_LIBRARY_PATH" | | #define LT_DLSEARCH_PATH "/lib:/usr/lib:/usr/lib64/atlas:/opt/bio/ncbi/lib/:/opt/bio/EMBOSS/lib/:/opt/bio/glimmer/lib/:/opt/bio/gromacs/lib/:/opt/bio/tigr/obj/:/opt/bio/wgs/lib:/usr/lib64/cernlib/2006/lib:/opt/mellanox/fca/lib:/lib:/lib64:/usr/lib:/usr/lib64:/opt/rocks/lib:/opt/ganglia/lib64:/opt/ibutils/lib64:/opt/mellanox/libibprof/lib:/opt/mellanox/mxm/lib:/usr/lib64/mysql:/usr/lib64/octave/3.4.3:/usr/lib64/papi-4.1.3:/usr/lib64/papi-5.1.1/usr/lib:/opt/pdsh/lib/pdsh:/usr/pgsql-9.5/lib/:/usr/lib64/qt-3.3/lib:/usr/lib64/xulrunner:/lib64:/usr/lib64:/usr/kerberos/lib64" | | #define HAVE_LIBDL 1 | | #define HAVE_DLERROR 1 | | #define HAVE_LIBDLLOADER 1 | | #define HAVE_ARGZ_H 1 | | #define HAVE_ERROR_T 1 | | #define HAVE_ARGZ_ADD 1 | | #define HAVE_ARGZ_APPEND 1 | | #define HAVE_ARGZ_COUNT 1 | | #define HAVE_ARGZ_CREATE_SEP 1 | | #define HAVE_ARGZ_INSERT 1 | | #define HAVE_ARGZ_NEXT 1 | | #define HAVE_ARGZ_STRINGIFY 1 | | #define HAVE_WORKING_ARGZ 1 | | #define HAVE_PRELOADED_SYMBOLS 1 | | #define HAVE_UNISTD_H 1 | | #define HAVE_DIRENT_H 1 | | #define HAVE_CLOSEDIR 1 | | #define HAVE_OPENDIR 1 | | #define HAVE_READDIR 1 | | #define LT_LIBEXT "a" | | #define LT_LIBPREFIX "lib" | | /* end confdefs.h. */ | | #include | configure:14862: checking for ld used by g++ | configure:14929: result: /usr/bin/ld -m elf_x86_64 | configure:14936: checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld | configure:14951: result: yes | configure:15006: checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries | configure:16079: result: yes | configure:16115: g++ -c -g -O2 conftest.cpp >&5 | configure:16118: $? = 0 | configure:16599: checking for g++ option to produce PIC | configure:16606: result: -fPIC -DPIC | configure:16614: checking if g++ PIC flag -fPIC -DPIC works | configure:16632: g++ -c -g -O2 -fPIC -DPIC -DPIC conftest.cpp >&5 | configure:16636: $? = 0 | configure:16649: result: yes | configure:16672: checking if g++ static flag -static works | configure:16700: result: yes | configure:16712: checking if g++ supports -c -o file.o | configure:16733: g++ -c -g -O2 -o out/conftest2.o conftest.cpp >&5 | configure:16737: $? = 0 | configure:16759: result: yes | configure:16764: checking if g++ supports -c -o file.o | configure:16811: result: yes | configure:16841: checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries | configure:16881: result: yes | configure:17022: checking dynamic linker characteristics | configure:17767: result: GNU/Linux ld.so | configure:17832: checking how to hardcode library paths into programs | configure:17857: result: immediate | configure:17950: checking for g77 | configure:17966: found /usr/bin/g77 | configure:17977: result: g77 | configure:18003: checking for Fortran 77 compiler version | configure:18012: g77 --version >&5 | GNU Fortran (GCC) 3.4.6 20060404 (Red Hat 3.4.6-19.el6) | Copyright (C) 2006 Free Software Foundation, Inc. | | GNU Fortran comes with NO WARRANTY, to the extent permitted by law. | You may redistribute copies of GNU Fortran | under the terms of the GNU General Public License. | For more information about these matters, see the file named COPYING | or type the command `info -f g77 Copying'. | configure:18023: $? = 0 | configure:18012: g77 -v >&5 | Reading specs from /usr/lib/gcc/x86_64-redhat-linux/3.4.6/specs | Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --enable-shared --enable-threads=posix --disable-checking --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-languages=c,c++,f77 --disable-libgcj --host=x86_64-redhat-linux | Thread model: posix | gcc version 3.4.6 20060404 (Red Hat 3.4.6-19.el6) | configure:18023: $? = 0 | configure:18012: g77 -V >&5 | g77: `-V' option must have argument | configure:18023: $? = 1 | configure:18012: g77 -qversion >&5 | g77: unrecognized option `-qversion' | g77: no input files | configure:18023: $? = 1 | configure:18032: checking whether we are using the GNU Fortran 77 compiler | configure:18045: g77 -c conftest.F >&5 | configure:18045: $? = 0 | configure:18054: result: yes | configure:18060: checking whether g77 accepts -g | configure:18071: g77 -c -g conftest.f >&5 | configure:18071: $? = 0 | configure:18079: result: yes | configure:18208: checking if libtool supports shared libraries | configure:18210: result: yes | configure:18213: checking whether to build shared libraries | configure:18237: result: yes | configure:18240: checking whether to build static libraries | configure:18244: result: yes | configure:18596: checking for g77 option to produce PIC | configure:18603: result: -fPIC | configure:18611: checking if g77 PIC flag -fPIC works | configure:18629: g77 -c -g -O2 -fPIC conftest.f >&5 | configure:18633: $? = 0 | configure:18646: result: yes | configure:18669: checking if g77 static flag -static works | configure:18697: result: yes | configure:18709: checking if g77 supports -c -o file.o | configure:18730: g77 -c -g -O2 -o out/conftest2.o conftest.f >&5 | configure:18734: $? = 0 | configure:18756: result: yes | configure:18761: checking if g77 supports -c -o file.o | configure:18808: result: yes | configure:18838: checking whether the g77 linker (/usr/bin/ld -m elf_x86_64) supports shared libraries | configure:20047: result: yes | configure:20188: checking dynamic linker characteristics | configure:20927: result: GNU/Linux ld.so | configure:20992: checking how to hardcode library paths into programs | configure:21017: result: immediate | configure:21103: checking for gfortran | configure:21119: found /usr/bin/gfortran | configure:21130: result: gfortran | configure:21156: checking for Fortran compiler version | configure:21165: gfortran --version >&5 | GNU Fortran (GCC) 4.4.7 20120313 (Red Hat 4.4.7-4) | Copyright (C) 2010 Free Software Foundation, Inc. | | GNU Fortran comes with NO WARRANTY, to the extent permitted by law. | You may redistribute copies of GNU Fortran | under the terms of the GNU General Public License. | For more information about these matters, see the file named COPYING | | configure:21176: $? = 0 | configure:21165: gfortran -v >&5 | Using built-in specs. | Target: x86_64-redhat-linux | Configured with: ../configure --prefix=/usr --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=http://bugzilla.redhat.com/bugzilla --enable-bootstrap --enable-shared --enable-threads=posix --enable-checking=release --with-system-zlib --enable-__cxa_atexit --disable-libunwind-exceptions --enable-gnu-unique-object --enable-languages=c,c++,objc,obj-c++,java,fortran,ada --enable-java-awt=gtk --disable-dssi --with-java-home=/usr/lib/jvm/java-1.5.0-gcj-1.5.0.0/jre --enable-libgcj-multifile --enable-java-maintainer-mode --with-ecj-jar=/usr/share/java/eclipse-ecj.jar --disable-libjava-multilib --with-ppl --with-cloog --with-tune=generic --with-arch_32=i686 --build=x86_64-redhat-linux | Thread model: posix | gcc version 4.4.7 20120313 (Red Hat 4.4.7-4) (GCC) | configure:21176: $? = 0 | configure:21165: gfortran -V >&5 | gfortran: '-V' option must have argument | configure:21176: $? = 1 | configure:21165: gfortran -qversion >&5 | gfortran: unrecognized option '-qversion' | gfortran: no input files | configure:21176: $? = 1 | configure:21185: checking whether we are using the GNU Fortran compiler | configure:21198: gfortran -c conftest.F >&5 | configure:21198: $? = 0 | configure:21207: result: yes | configure:21213: checking whether gfortran accepts -g | configure:21224: gfortran -c -g conftest.f >&5 | configure:21224: $? = 0 | configure:21232: result: yes | configure:21364: checking if libtool supports shared libraries | configure:21366: result: yes | configure:21369: checking whether to build shared libraries | configure:21393: result: yes | configure:21396: checking whether to build static libraries | configure:21400: result: yes | configure:21434: gfortran -c -g -O2 conftest.f >&5 | configure:21437: $? = 0 | configure:21897: checking for gfortran option to produce PIC | configure:21904: result: -fPIC | configure:21912: checking if gfortran PIC flag -fPIC works | configure:21930: gfortran -c -g -O2 -fPIC conftest.f >&5 | configure:21934: $? = 0 | configure:21947: result: yes | configure:21970: checking if gfortran static flag -static works | configure:21998: result: yes | configure:22010: checking if gfortran supports -c -o file.o | configure:22031: gfortran -c -g -O2 -o out/conftest2.o conftest.f >&5 | configure:22035: $? = 0 | configure:22057: result: yes | configure:22062: checking if gfortran supports -c -o file.o | configure:22109: result: yes | configure:22139: checking whether the gfortran linker (/usr/bin/ld -m elf_x86_64) supports shared libraries | configure:23348: result: yes | configure:23489: checking dynamic linker characteristics | configure:24228: result: GNU/Linux ld.so | configure:24293: checking how to hardcode library paths into programs | configure:24318: result: immediate | configure:24394: checking for gccgo | configure:24424: result: no | configure:26620: checking for gcj | configure:26650: result: no | configure:28847: checking for windres | configure:28877: result: no | configure:29177: checking that generated files are newer than configure | configure:29183: result: done | configure:29257: creating ./config.status | | ## ---------------------- ## | ## Running config.status. ## | ## ---------------------- ## | | This file was extended by GNU Libtool config.status 2.4.6, which was | generated by GNU Autoconf 2.69. Invocation command line was | | CONFIG_FILES = | CONFIG_HEADERS = | CONFIG_LINKS = | CONFIG_COMMANDS = | $ ./config.status | | on castor.narit.or.th | | config.status:1492: creating Makefile | config.status:1492: creating config.h | config.status:1752: executing tests/atconfig commands | config.status:1752: executing depfiles commands | config.status:1752: executing libtool commands | | ## ---------------- ## | ## Cache variables. ## | ## ---------------- ## | | ac_cv_build=x86_64-unknown-linux-gnu | ac_cv_c_compiler_gnu=yes | ac_cv_cxx_compiler_gnu=yes | ac_cv_env_CCC_set= | ac_cv_env_CCC_value= | ac_cv_env_CC_set= | ac_cv_env_CC_value= | ac_cv_env_CFLAGS_set= | ac_cv_env_CFLAGS_value= | ac_cv_env_CPPFLAGS_set= | ac_cv_env_CPPFLAGS_value= | ac_cv_env_CPP_set= | ac_cv_env_CPP_value= | ac_cv_env_CXXCPP_set= | ac_cv_env_CXXCPP_value= | ac_cv_env_CXXFLAGS_set= | ac_cv_env_CXXFLAGS_value= | ac_cv_env_CXX_set= | ac_cv_env_CXX_value= | ac_cv_env_F77_set= | ac_cv_env_F77_value= | ac_cv_env_FCFLAGS_set= | ac_cv_env_FCFLAGS_value= | ac_cv_env_FC_set= | ac_cv_env_FC_value= | ac_cv_env_FFLAGS_set= | ac_cv_env_FFLAGS_value= | ac_cv_env_LDFLAGS_set= | ac_cv_env_LDFLAGS_value= | ac_cv_env_LIBS_set= | ac_cv_env_LIBS_value= | ac_cv_env_LT_SYS_LIBRARY_PATH_set= | ac_cv_env_LT_SYS_LIBRARY_PATH_value= | ac_cv_env_M4_set= | ac_cv_env_M4_value= | ac_cv_env_build_alias_set= | ac_cv_env_build_alias_value= | ac_cv_env_host_alias_set= | ac_cv_env_host_alias_value= | ac_cv_env_target_alias_set= | ac_cv_env_target_alias_value= | ac_cv_f77_compiler_gnu=yes | ac_cv_fc_compiler_gnu=yes | ac_cv_func_argz_add=yes | ac_cv_func_argz_append=yes | ac_cv_func_argz_count=yes | ac_cv_func_argz_create_sep=yes | ac_cv_func_argz_insert=yes | ac_cv_func_argz_next=yes | ac_cv_func_argz_stringify=yes | ac_cv_func_closedir=yes | ac_cv_func_dlerror=yes | ac_cv_func_dlopen=no | ac_cv_func_opendir=yes | ac_cv_func_readdir=yes | ac_cv_func_shl_load=no | ac_cv_func_strlcat=no | ac_cv_func_strlcpy=no | ac_cv_header_argz_h=yes | ac_cv_header_dirent_h=yes | ac_cv_header_dl_h=no | ac_cv_header_dld_h=no | ac_cv_header_dlfcn_h=yes | ac_cv_header_inttypes_h=yes | ac_cv_header_mach_o_dyld_h=no | ac_cv_header_memory_h=yes | ac_cv_header_stdc=yes | ac_cv_header_stdint_h=yes | ac_cv_header_stdlib_h=yes | ac_cv_header_string_h=yes | ac_cv_header_strings_h=yes | ac_cv_header_sys_dl_h=no | ac_cv_header_sys_stat_h=yes | ac_cv_header_sys_types_h=yes | ac_cv_header_unistd_h=yes | ac_cv_host=x86_64-unknown-linux-gnu | ac_cv_lib_dl_dlopen=yes | ac_cv_lib_dld_dld_link=no | ac_cv_lib_dld_shl_load=no | ac_cv_objext=o | ac_cv_path_EGREP='/bin/grep -E' | ac_cv_path_FGREP='/bin/grep -F' | ac_cv_path_GREP=/bin/grep | ac_cv_path_M4=/usr/bin/m4 | ac_cv_path_SED=/bin/sed | ac_cv_path_install='/usr/bin/install -c' | ac_cv_path_lt_DD=/bin/dd | ac_cv_path_mkdir=/bin/mkdir | ac_cv_prog_AWK=gawk | ac_cv_prog_CPP='gcc -E' | ac_cv_prog_CXXCPP='g++ -E' | ac_cv_prog_ac_ct_AR=ar | ac_cv_prog_ac_ct_CC=gcc | ac_cv_prog_ac_ct_CXX=g++ | ac_cv_prog_ac_ct_F77=g77 | ac_cv_prog_ac_ct_FC=gfortran | ac_cv_prog_ac_ct_OBJDUMP=objdump | ac_cv_prog_ac_ct_RANLIB=ranlib | ac_cv_prog_ac_ct_STRIP=strip | ac_cv_prog_cc_c89= | ac_cv_prog_cc_g=yes | ac_cv_prog_cxx_g=yes | ac_cv_prog_f77_g=yes | ac_cv_prog_fc_g=yes | ac_cv_prog_gnu_m4_debugfile=--debugfile | ac_cv_prog_gnu_m4_gnu=yes | ac_cv_prog_make_make_set=yes | ac_cv_search_dlopen=-ldl | ac_cv_type_error_t=yes | am_cv_CC_dependencies_compiler_type=gcc3 | am_cv_CXX_dependencies_compiler_type=gcc3 | am_cv_make_support_nested_variables=yes | am_cv_prog_cc_c_o=yes | gl_cv_c_amsterdam_compiler=no | libltdl_cv_lib_dl_dlopen=yes | libltdl_cv_preloaded_symbols=yes | libltdl_cv_shlibext=.so | libltdl_cv_shrext=.so | lt_cv_ar_at_file=@ | lt_cv_archive_cmds_need_lc=no | lt_cv_deplibs_check_method=pass_all | lt_cv_dlopen=dlopen | lt_cv_dlopen_libs=-ldl | lt_cv_dlopen_self=yes | lt_cv_dlopen_self_static=no | lt_cv_file_magic_cmd='$MAGIC_CMD' | lt_cv_file_magic_test_file= | lt_cv_ld_reload_flag=-r | lt_cv_module_path_var=LD_LIBRARY_PATH | lt_cv_nm_interface='BSD nm' | lt_cv_objdir=.libs | lt_cv_path_LD=/usr/bin/ld | lt_cv_path_LDCXX='/usr/bin/ld -m elf_x86_64' | lt_cv_path_NM='/usr/bin/nm -B' | lt_cv_path_mainfest_tool=no | lt_cv_prog_compiler_c_o=yes | lt_cv_prog_compiler_c_o_CXX=yes | lt_cv_prog_compiler_c_o_F77=yes | lt_cv_prog_compiler_c_o_FC=yes | lt_cv_prog_compiler_c_o_RC=yes | lt_cv_prog_compiler_pic='-fPIC -DPIC' | lt_cv_prog_compiler_pic_CXX='-fPIC -DPIC' | lt_cv_prog_compiler_pic_F77=-fPIC | lt_cv_prog_compiler_pic_FC=-fPIC | lt_cv_prog_compiler_pic_works=yes | lt_cv_prog_compiler_pic_works_CXX=yes | lt_cv_prog_compiler_pic_works_F77=yes | lt_cv_prog_compiler_pic_works_FC=yes | lt_cv_prog_compiler_rtti_exceptions=no | lt_cv_prog_compiler_static_works=yes | lt_cv_prog_compiler_static_works_CXX=yes | lt_cv_prog_compiler_static_works_F77=yes | lt_cv_prog_compiler_static_works_FC=yes | lt_cv_prog_gnu_ld=yes | lt_cv_prog_gnu_ldcxx=yes | lt_cv_sharedlib_from_linklib_cmd='printf %s\n' | lt_cv_shlibpath_overrides_runpath=no | lt_cv_sys_argz_works=yes | lt_cv_sys_dlopen_deplibs=yes | lt_cv_sys_dlsearch_path='/lib /usr/lib /usr/lib64/atlas /opt/bio/ncbi/lib/ /opt/bio/EMBOSS/lib/ /opt/bio/glimmer/lib/ /opt/bio/gromacs/lib/ /opt/bio/tigr/obj/ /opt/bio/wgs/lib /usr/lib64/cernlib/2006/lib /opt/mellanox/fca/lib /lib /lib64 /usr/lib /usr/lib64 /opt/rocks/lib /opt/ganglia/lib64 /opt/ibutils/lib64 /opt/mellanox/libibprof/lib /opt/mellanox/mxm/lib /usr/lib64/mysql /usr/lib64/octave/3.4.3 /usr/lib64/papi-4.1.3 /usr/lib64/papi-5.1.1/usr/lib /opt/pdsh/lib/pdsh /usr/pgsql-9.5/lib/ /usr/lib64/qt-3.3/lib /usr/lib64/xulrunner /lib64 /usr/lib64 /usr/kerberos/lib64 ' | lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p'\'' | sed '\''/ __gnu_lto/d'\''' | lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \(.*\) .*$/ {"\1", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/ {"\1", (void *) \&\1},/p'\''' | lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \(.*\) .*$/ {"\1", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(lib.*\)$/ {"\1", (void *) \&\1},/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/ {"lib\1", (void *) \&\1},/p'\''' | lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int \1();/p'\'' -e '\''s/^[ABCDGIRSTW][ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p'\''' | lt_cv_sys_global_symbol_to_import= | lt_cv_sys_max_cmd_len=1966080 | lt_cv_sys_symbol_underscore=no | lt_cv_to_host_file_cmd=func_convert_file_noop | lt_cv_to_tool_file_cmd=func_convert_file_noop | lt_cv_truncate_bin='/bin/dd bs=4096 count=1' | | ## ----------------- ## | ## Output variables. ## | ## ----------------- ## | | ACLOCAL='${SHELL} /home/ittipat/src/libtool-2.4.6/build-aux/missing aclocal-1.15' | AMDEPBACKSLASH='\' | AMDEP_FALSE='#' | AMDEP_TRUE='' | AMTAR='$${TAR-tar}' | AM_BACKSLASH='\' | AM_DEFAULT_V='$(AM_DEFAULT_VERBOSITY)' | AM_DEFAULT_VERBOSITY='0' | AM_V='$(V)' | AR='ar' | ARFLAGS='cru' | AS='as' | AUTOCONF='${SHELL} /home/ittipat/src/libtool-2.4.6/build-aux/missing autoconf' | AUTOHEADER='${SHELL} /home/ittipat/src/libtool-2.4.6/build-aux/missing autoheader' | AUTOM4TE='autom4te' | AUTOMAKE='${SHELL} /home/ittipat/src/libtool-2.4.6/build-aux/missing automake-1.15' | AUTOTEST='$(AUTOM4TE) --language=autotest' | AWK='gawk' | CC='gcc' | CCDEPMODE='depmode=gcc3' | CFLAGS='-g -O2' | CONFIG_INCLUDE='config.h' | CONFIG_STATUS_DEPENDENCIES='$(srcdir)/.version' | CONVENIENCE_LTDL_FALSE='' | CONVENIENCE_LTDL_TRUE='#' | CPP='gcc -E' | CPPFLAGS='' | CXX='g++' | CXXCPP='g++ -E' | CXXDEPMODE='depmode=gcc3' | CXXFLAGS='-g -O2' | CYGPATH_W='echo' | DEFS='-DHAVE_CONFIG_H' | DEPDIR='.deps' | DLLTOOL='false' | DSYMUTIL='' | DUMPBIN='' | ECHO_C='' | ECHO_N='-n' | ECHO_T='' | EGREP='/bin/grep -E' | EXEEXT='' | F77='g77' | FC='gfortran' | FCFLAGS='-g -O2' | FFLAGS='-g -O2' | FGREP='/bin/grep -F' | GCJ='' | GCJFLAGS='-g -O2' | GL_COND_LIBTOOL_FALSE='#' | GL_COND_LIBTOOL_TRUE='' | GL_LIBOBJS='' | GL_LTLIBOBJS='' | GLtests_LIBOBJS='' | GLtests_LTLIBOBJS='' | GLtests_WITNESS='IN_LIBTOOL_GNULIB_TESTS' | GOC='' | GREP='/bin/grep' | HELP2MAN='${SHELL} /home/ittipat/src/libtool-2.4.6/build-aux/missing help2man' | INSTALL_DATA='${INSTALL} -m 644' | INSTALL_LTDL_FALSE='#' | INSTALL_LTDL_TRUE='' | INSTALL_PROGRAM='${INSTALL}' | INSTALL_SCRIPT='${INSTALL}' | INSTALL_STRIP_PROGRAM='$(install_sh) -c -s' | LD='/usr/bin/ld -m elf_x86_64' | LDFLAGS='' | LIBADD_DL='-ldl ' | LIBADD_DLD_LINK='' | LIBADD_DLOPEN='-ldl' | LIBADD_SHL_LOAD='' | LIBOBJS=' ${LIBOBJDIR}lt__strl$U.o' | LIBS='' | LIBTOOL='$(SHELL) $(top_builddir)/libtool' | LIPO='' | LN_S='ln -s' | LTDLOPEN='libltdl' | LTLIBOBJS=' ${LIBOBJDIR}lt__strl$U.lo' | LT_ARGZ_H='' | LT_CONFIG_H='config.h' | LT_DLLOADERS=' libltdl/dlopen.la' | LT_DLPREOPEN='-dlpreopen libltdl/dlopen.la ' | LT_SYS_LIBRARY_PATH='' | M4='/usr/bin/m4' | M4_DEBUGFILE='--debugfile' | M4_GNU='--gnu' | MAKEINFO='${SHELL} /home/ittipat/src/libtool-2.4.6/build-aux/missing makeinfo' | MANIFEST_TOOL=':' | MKDIR_P='/bin/mkdir -p' | NM='/usr/bin/nm -B' | NMEDIT='' | OBJDUMP='objdump' | OBJEXT='o' | OTOOL64='' | OTOOL='' | PACKAGE='libtool' | PACKAGE_BUGREPORT='address@hidden' | PACKAGE_NAME='GNU Libtool' | PACKAGE_STRING='GNU Libtool 2.4.6' | PACKAGE_TARNAME='libtool' | PACKAGE_URL='http://www.gnu.org/software/libtool/' | PACKAGE_VERSION='2.4.6' | PATH_SEPARATOR=':' | RANLIB='ranlib' | RC='' | SED='/bin/sed' | SET_MAKE='' | SHELL='/bin/sh' | STRIP='strip' | VERSION='2.4.6' | ac_ct_AR='ar' | ac_ct_CC='gcc' | ac_ct_CXX='g++' | ac_ct_DUMPBIN='' | ac_ct_F77='g77' | ac_ct_FC='gfortran' | aclocaldir='$(datadir)/aclocal' | am__EXEEXT_FALSE='' | am__EXEEXT_TRUE='#' | am__fastdepCC_FALSE='#' | am__fastdepCC_TRUE='' | am__fastdepCXX_FALSE='#' | am__fastdepCXX_TRUE='' | am__include='include' | am__isrc='' | am__leading_dot='.' | am__nodep='_no' | am__quote='' | am__tar='$${TAR-tar} chof - "$$tardir"' | am__untar='$${TAR-tar} xf -' | aux_dir='build-aux' | bindir='${exec_prefix}/bin' | build='x86_64-unknown-linux-gnu' | build_alias='' | build_cpu='x86_64' | build_os='linux-gnu' | build_vendor='unknown' | datadir='${datarootdir}' | datarootdir='${prefix}/share' | docdir='${datarootdir}/doc/${PACKAGE_TARNAME}' | dvidir='${docdir}' | exec_prefix='${prefix}' | host='x86_64-unknown-linux-gnu' | host_alias='' | host_cpu='x86_64' | host_os='linux-gnu' | host_vendor='unknown' | htmldir='${docdir}' | includedir='${prefix}/include' | infodir='${datarootdir}/info' | install_sh='${SHELL} /home/ittipat/src/libtool-2.4.6/build-aux/install-sh' | libdir='${exec_prefix}/lib' | libexecdir='${exec_prefix}/libexec' | localedir='${datarootdir}/locale' | localstatedir='${prefix}/var' | ltdl_dir='libltdl' | macro_dir='m4' | mandir='${datarootdir}/man' | mkdir_p='$(MKDIR_P)' | oldincludedir='/usr/include' | package_revision='2.4.6' | pdfdir='${docdir}' | pkgaux_scripts='compile config.guess config.sub depcomp install-sh missing' | pkgdatadir='$(datadir)/libtool' | prefix='/share/apps/utils/libtool-2.4.6' | program_transform_name='s,x,x,' | psdir='${docdir}' | sbindir='${exec_prefix}/sbin' | sharedstatedir='${prefix}/com' | sys_symbol_underscore='no' | sysconfdir='${prefix}/etc' | target_alias='' | to_host_file_cmd='func_convert_file_noop' | to_tool_file_cmd='func_convert_file_noop' | with_aix_soname='aix' | | ## ----------- ## | ## confdefs.h. ## | ## ----------- ## | | /* confdefs.h */ | #define PACKAGE_NAME "GNU Libtool" | #define PACKAGE_TARNAME "libtool" | #define PACKAGE_VERSION "2.4.6" | #define PACKAGE_STRING "GNU Libtool 2.4.6" | #define PACKAGE_BUGREPORT "address@hidden" | #define PACKAGE_URL "http://www.gnu.org/software/libtool/" | #define PACKAGE "libtool" | #define VERSION "2.4.6" | #define STDC_HEADERS 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDLIB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DLFCN_H 1 | #define LT_OBJDIR ".libs/" | #define LT_MODULE_EXT ".so" | #define LT_MODULE_PATH_VAR "LD_LIBRARY_PATH" | #define LT_DLSEARCH_PATH "/lib:/usr/lib:/usr/lib64/atlas:/opt/bio/ncbi/lib/:/opt/bio/EMBOSS/lib/:/opt/bio/glimmer/lib/:/opt/bio/gromacs/lib/:/opt/bio/tigr/obj/:/opt/bio/wgs/lib:/usr/lib64/cernlib/2006/lib:/opt/mellanox/fca/lib:/lib:/lib64:/usr/lib:/usr/lib64:/opt/rocks/lib:/opt/ganglia/lib64:/opt/ibutils/lib64:/opt/mellanox/libibprof/lib:/opt/mellanox/mxm/lib:/usr/lib64/mysql:/usr/lib64/octave/3.4.3:/usr/lib64/papi-4.1.3:/usr/lib64/papi-5.1.1/usr/lib:/opt/pdsh/lib/pdsh:/usr/pgsql-9.5/lib/:/usr/lib64/qt-3.3/lib:/usr/lib64/xulrunner:/lib64:/usr/lib64:/usr/kerberos/lib64" | #define HAVE_LIBDL 1 | #define HAVE_DLERROR 1 | #define HAVE_LIBDLLOADER 1 | #define HAVE_ARGZ_H 1 | #define HAVE_ERROR_T 1 | #define HAVE_ARGZ_ADD 1 | #define HAVE_ARGZ_APPEND 1 | #define HAVE_ARGZ_COUNT 1 | #define HAVE_ARGZ_CREATE_SEP 1 | #define HAVE_ARGZ_INSERT 1 | #define HAVE_ARGZ_NEXT 1 | #define HAVE_ARGZ_STRINGIFY 1 | #define HAVE_WORKING_ARGZ 1 | #define HAVE_PRELOADED_SYMBOLS 1 | #define HAVE_UNISTD_H 1 | #define HAVE_DIRENT_H 1 | #define HAVE_CLOSEDIR 1 | #define HAVE_OPENDIR 1 | #define HAVE_READDIR 1 | #define LT_LIBEXT "a" | #define LT_LIBPREFIX "lib" | | configure: exit 0