I'd just like to know / see examples of models that read in
detailed data to initialize a simulation. Anybody got one besides
the Anasazi Village model??
pj
Scott Christley wrote:
Greetings,
Is anybody aware of research with an agent-based model (or other
modeling approaches) that simulates evolution (recombination/
mutation) on actual genomic data? I'm aware that genetic
algorithms often use an artificial genome with attributes encoded
in artificial genes, but I am looking for anybody who is using
actual nucleotide sequence. For example, a population genetics
study may have sequenced a number of alleles for an organism,
then use those alleles (and possible allele frequencies) to
simulate and predict how environmental changes could affect the
population diversity. I am able to find empirical studies which
record allozyme diversity across species, spatially, etc. but I
have not found anybody doing simulations with the actual genomic
data.
thanks
Scott
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Paul E. Johnson email: address@hidden
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